data_2A4Z
#
_model_server_result.job_id            30QU8NCoogFd4wBEEBEevg 
_model_server_result.datetime_utc      '2024-12-21 18:36:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2a4z 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":101}' 
#
_entry.id    2A4Z 
#
_exptl.entry_id    2A4Z 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              285.224 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (5E)-5-[(2,2-DIFLUORO-1,3-BENZODIOXOL-5-YL)METHYLENE]-1,3-THIAZOLIDINE-2,4-DIONE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.77 
_cell.angle_gamma         90 
_cell.entry_id            2A4Z 
_cell.length_a            142.352 
_cell.length_b            67.648 
_cell.length_c            106.39 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2A4Z 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C11 H5 F2 N O4 S' 
_chem_comp.formula_weight    285.224 
_chem_comp.id                BYM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (5E)-5-[(2,2-DIFLUORO-1,3-BENZODIOXOL-5-YL)METHYLENE]-1,3-THIAZOLIDINE-2,4-DIONE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 N2 BYM sing 70 n n 
C1 C5 BYM sing 71 n n 
C1 O7 BYM doub 72 n n 
C3 N2 BYM sing 73 n n 
C3 S4 BYM sing 74 n n 
C3 O6 BYM doub 75 n n 
C8 C9 BYM doub 76 n y 
C8 C11 BYM sing 77 n y 
C8 O10 BYM sing 78 n n 
C9 C13 BYM sing 79 n y 
C9 O12 BYM sing 80 n n 
C11 C15 BYM doub 81 n y 
C11 H11 BYM sing 82 n n 
C13 C16 BYM doub 83 n y 
C13 H13 BYM sing 84 n n 
C14 O10 BYM sing 85 n n 
C14 O12 BYM sing 86 n n 
C14 F17 BYM sing 87 n n 
C14 F19 BYM sing 88 n n 
C15 C16 BYM sing 89 n y 
C15 C18 BYM sing 90 n n 
C16 H16 BYM sing 91 n n 
N2 HN2 BYM sing 92 n n 
S4 C5 BYM sing 93 n n 
C5 C18 BYM doub 94 z n 
C18 H18 BYM sing 95 n n 
#
_atom_sites.entry_id                     2A4Z 
_atom_sites.fract_transf_matrix[1][1]    0.00703 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00071 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01478 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00945 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 BYM A 1 101 101 BYM BYM . 
C 3 HOH A 1 1 1 HOH WAT . 
C 3 HOH A 2 2 2 HOH WAT . 
C 3 HOH A 3 3 3 HOH WAT . 
C 3 HOH A 4 4 4 HOH WAT . 
C 3 HOH A 5 5 5 HOH WAT . 
C 3 HOH A 6 6 6 HOH WAT . 
C 3 HOH A 7 7 7 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BYM . . . B 2 40.17 14.192 32.572 1 41.3 ? C1 BYM 101 A 1 
HETATM 2 C C3 BYM . . . B 2 41.086 15.569 34.236 1 41.84 ? C3 BYM 101 A 1 
HETATM 3 C C8 BYM . . . B 2 45.662 14.382 29.998 1 42.67 ? C8 BYM 101 A 1 
HETATM 4 C C9 BYM . . . B 2 45.918 13.313 29.245 1 43.25 ? C9 BYM 101 A 1 
HETATM 5 C C11 BYM . . . B 2 44.329 14.608 30.581 1 42.42 ? C11 BYM 101 A 1 
HETATM 6 C C13 BYM . . . B 2 44.887 12.305 28.959 1 43.7 ? C13 BYM 101 A 1 
HETATM 7 C C14 BYM . . . B 2 47.801 14.297 29.652 1 48.3 ? C14 BYM 101 A 1 
HETATM 8 C C15 BYM . . . B 2 43.335 13.684 30.34 1 49.05 ? C15 BYM 101 A 1 
HETATM 9 C C16 BYM . . . B 2 43.651 12.483 29.48 1 46.47 ? C16 BYM 101 A 1 
HETATM 10 N N2 BYM . . . B 2 39.942 14.87 33.792 1 47.21 ? N2 BYM 101 A 1 
HETATM 11 S S4 BYM . . . B 2 42.468 15.39 33.151 1 42.56 ? S4 BYM 101 A 1 
HETATM 12 C C5 BYM . . . B 2 41.532 14.365 32.045 1 50.55 ? C5 BYM 101 A 1 
HETATM 13 O O6 BYM . . . B 2 41.101 16.232 35.272 1 51.68 ? O6 BYM 101 A 1 
HETATM 14 O O7 BYM . . . B 2 39.297 13.525 32.017 1 63.87 ? O7 BYM 101 A 1 
HETATM 15 O O10 BYM . . . B 2 46.76 15.197 30.136 1 39.18 ? O10 BYM 101 A 1 
HETATM 16 O O12 BYM . . . B 2 47.211 13.278 28.804 1 52.57 ? O12 BYM 101 A 1 
HETATM 17 F F17 BYM . . . B 2 48.429 13.723 30.745 1 45.26 ? F17 BYM 101 A 1 
HETATM 18 C C18 BYM . . . B 2 41.939 13.797 30.882 1 40 ? C18 BYM 101 A 1 
HETATM 19 F F19 BYM . . . B 2 48.736 14.975 28.906 1 47.43 ? F19 BYM 101 A 1 
#
_model_server_stats.io_time_ms              58 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           624 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           19 
#