data_2A5F # _model_server_result.job_id -er7YCnu5YI-Iq4h6elILQ _model_server_result.datetime_utc '2024-11-15 00:29:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2a5f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":231}' # _entry.id 2A5F # _exptl.entry_id 2A5F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2A5F _cell.length_a 44.905 _cell.length_b 90.925 _cell.length_c 98.001 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2A5F _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 27 A THR 27 1_555 C MG MG . A MG 231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc2 A OG1 THR 44 A THR 44 1_555 C MG MG . A MG 231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc3 D O2G GTP . A GTP 230 1_555 C MG MG . A MG 231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc4 D O2B GTP . A GTP 230 1_555 C MG MG . A MG 231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc5 C MG MG . A MG 231 1_555 H O HOH . A HOH 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc6 C MG MG . A MG 231 1_555 H O HOH . A HOH 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc7 B OG1 THR 91 B THR 90 1_555 E NA NA . B NA 1326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc8 B O THR 91 B THR 90 1_555 E NA NA . B NA 1326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? metalc ? metalc9 B O TYR 151 B TYR 150 1_555 E NA NA . B NA 1326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? metalc ? metalc10 B O LEU 154 B LEU 153 1_555 E NA NA . B NA 1326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc11 E NA NA . B NA 1326 1_555 I O HOH . B HOH 1597 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.59 ? metalc ? metalc12 E NA NA . B NA 1326 1_555 I O HOH . B HOH 1641 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.561 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2A5F _atom_sites.fract_transf_matrix[1][1] 0.022269 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010998 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010204 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG A 1 231 231 MG MG . D 4 GTP A 1 230 230 GTP GTP . E 5 NA B 1 1326 326 NA NA . F 6 NAD B 1 1536 536 NAD NAD . G 7 GOL B 1 1114 114 GOL GOL . H 8 HOH A 1 244 244 HOH HOH . H 8 HOH A 2 245 245 HOH HOH . H 8 HOH A 3 249 249 HOH HOH . H 8 HOH A 4 253 253 HOH HOH . H 8 HOH A 5 255 255 HOH HOH . H 8 HOH A 6 258 258 HOH HOH . H 8 HOH A 7 262 262 HOH HOH . H 8 HOH A 8 274 274 HOH HOH . H 8 HOH A 9 276 276 HOH HOH . H 8 HOH A 10 278 278 HOH HOH . H 8 HOH A 11 281 281 HOH HOH . H 8 HOH A 12 282 282 HOH HOH . H 8 HOH A 13 290 290 HOH HOH . H 8 HOH A 14 291 291 HOH HOH . H 8 HOH A 15 301 301 HOH HOH . H 8 HOH A 16 311 311 HOH HOH . H 8 HOH A 17 1002 2 HOH HOH . H 8 HOH A 18 1007 7 HOH HOH . H 8 HOH A 19 1025 25 HOH HOH . H 8 HOH A 20 1044 44 HOH HOH . H 8 HOH A 21 1048 48 HOH HOH . H 8 HOH A 22 1053 53 HOH HOH . H 8 HOH A 23 1068 68 HOH HOH . H 8 HOH A 24 1078 78 HOH HOH . H 8 HOH A 25 1079 79 HOH HOH . H 8 HOH A 26 1080 80 HOH HOH . H 8 HOH A 27 1081 81 HOH HOH . H 8 HOH A 28 1082 82 HOH HOH . H 8 HOH A 29 1094 94 HOH HOH . H 8 HOH A 30 1101 101 HOH HOH . H 8 HOH A 31 1105 105 HOH HOH . H 8 HOH A 32 1108 108 HOH HOH . H 8 HOH A 33 1113 113 HOH HOH . H 8 HOH A 34 1119 119 HOH HOH . H 8 HOH A 35 1123 123 HOH HOH . H 8 HOH A 36 1127 127 HOH HOH . H 8 HOH A 37 1131 131 HOH HOH . H 8 HOH A 38 1133 133 HOH HOH . H 8 HOH A 39 1134 134 HOH HOH . H 8 HOH A 40 1136 136 HOH HOH . H 8 HOH A 41 1269 269 HOH HOH . H 8 HOH A 42 1537 537 HOH HOH . H 8 HOH A 43 1538 538 HOH HOH . H 8 HOH A 44 1542 542 HOH HOH . H 8 HOH A 45 1543 543 HOH HOH . H 8 HOH A 46 1544 544 HOH HOH . H 8 HOH A 47 1547 547 HOH HOH . H 8 HOH A 48 1550 550 HOH HOH . H 8 HOH A 49 1551 551 HOH HOH . H 8 HOH A 50 1552 552 HOH HOH . H 8 HOH A 51 1553 553 HOH HOH . H 8 HOH A 52 1566 566 HOH HOH . H 8 HOH A 53 1567 567 HOH HOH . H 8 HOH A 54 1568 568 HOH HOH . H 8 HOH A 55 1569 569 HOH HOH . H 8 HOH A 56 1577 577 HOH HOH . H 8 HOH A 57 1579 579 HOH HOH . H 8 HOH A 58 1591 591 HOH HOH . H 8 HOH A 59 1593 593 HOH HOH . H 8 HOH A 60 1594 594 HOH HOH . H 8 HOH A 61 1606 606 HOH HOH . H 8 HOH A 62 1611 611 HOH HOH . H 8 HOH A 63 1613 613 HOH HOH . H 8 HOH A 64 1615 615 HOH HOH . H 8 HOH A 65 1616 616 HOH HOH . H 8 HOH A 66 1618 618 HOH HOH . H 8 HOH A 67 1619 619 HOH HOH . H 8 HOH A 68 1620 620 HOH HOH . H 8 HOH A 69 1621 621 HOH HOH . H 8 HOH A 70 1623 623 HOH HOH . H 8 HOH A 71 1629 629 HOH HOH . H 8 HOH A 72 1630 630 HOH HOH . I 8 HOH B 1 237 237 HOH HOH . I 8 HOH B 2 238 238 HOH HOH . I 8 HOH B 3 239 239 HOH HOH . I 8 HOH B 4 242 242 HOH HOH . I 8 HOH B 5 243 243 HOH HOH . I 8 HOH B 6 246 246 HOH HOH . I 8 HOH B 7 247 247 HOH HOH . I 8 HOH B 8 248 248 HOH HOH . I 8 HOH B 9 250 250 HOH HOH . I 8 HOH B 10 251 251 HOH HOH . I 8 HOH B 11 256 256 HOH HOH . I 8 HOH B 12 257 257 HOH HOH . I 8 HOH B 13 259 259 HOH HOH . I 8 HOH B 14 260 260 HOH HOH . I 8 HOH B 15 261 261 HOH HOH . I 8 HOH B 16 263 263 HOH HOH . I 8 HOH B 17 264 264 HOH HOH . I 8 HOH B 18 266 266 HOH HOH . I 8 HOH B 19 267 267 HOH HOH . I 8 HOH B 20 268 268 HOH HOH . I 8 HOH B 21 272 272 HOH HOH . I 8 HOH B 22 279 279 HOH HOH . I 8 HOH B 23 280 280 HOH HOH . I 8 HOH B 24 283 283 HOH HOH . I 8 HOH B 25 284 284 HOH HOH . I 8 HOH B 26 285 285 HOH HOH . I 8 HOH B 27 286 286 HOH HOH . I 8 HOH B 28 287 287 HOH HOH . I 8 HOH B 29 288 288 HOH HOH . I 8 HOH B 30 289 289 HOH HOH . I 8 HOH B 31 292 292 HOH HOH . I 8 HOH B 32 293 293 HOH HOH . I 8 HOH B 33 295 295 HOH HOH . I 8 HOH B 34 296 296 HOH HOH . I 8 HOH B 35 297 297 HOH HOH . I 8 HOH B 36 298 298 HOH HOH . I 8 HOH B 37 299 299 HOH HOH . I 8 HOH B 38 304 304 HOH HOH . I 8 HOH B 39 305 305 HOH HOH . I 8 HOH B 40 307 307 HOH HOH . I 8 HOH B 41 308 308 HOH HOH . I 8 HOH B 42 309 309 HOH HOH . I 8 HOH B 43 1005 5 HOH HOH . I 8 HOH B 44 1017 17 HOH HOH . I 8 HOH B 45 1018 18 HOH HOH . I 8 HOH B 46 1029 29 HOH HOH . I 8 HOH B 47 1035 35 HOH HOH . I 8 HOH B 48 1049 49 HOH HOH . I 8 HOH B 49 1052 52 HOH HOH . I 8 HOH B 50 1070 70 HOH HOH . I 8 HOH B 51 1071 71 HOH HOH . I 8 HOH B 52 1091 91 HOH HOH . I 8 HOH B 53 1095 95 HOH HOH . I 8 HOH B 54 1097 97 HOH HOH . I 8 HOH B 55 1102 102 HOH HOH . I 8 HOH B 56 1109 109 HOH HOH . I 8 HOH B 57 1116 116 HOH HOH . I 8 HOH B 58 1118 118 HOH HOH . I 8 HOH B 59 1120 120 HOH HOH . I 8 HOH B 60 1121 121 HOH HOH . I 8 HOH B 61 1122 122 HOH HOH . I 8 HOH B 62 1125 125 HOH HOH . I 8 HOH B 63 1128 128 HOH HOH . I 8 HOH B 64 1130 130 HOH HOH . I 8 HOH B 65 1132 132 HOH HOH . I 8 HOH B 66 1135 135 HOH HOH . I 8 HOH B 67 1540 540 HOH HOH . I 8 HOH B 68 1546 546 HOH HOH . I 8 HOH B 69 1548 548 HOH HOH . I 8 HOH B 70 1561 561 HOH HOH . I 8 HOH B 71 1575 575 HOH HOH . I 8 HOH B 72 1576 576 HOH HOH . I 8 HOH B 73 1583 583 HOH HOH . I 8 HOH B 74 1584 584 HOH HOH . I 8 HOH B 75 1585 585 HOH HOH . I 8 HOH B 76 1587 587 HOH HOH . I 8 HOH B 77 1589 589 HOH HOH . I 8 HOH B 78 1596 596 HOH HOH . I 8 HOH B 79 1597 597 HOH HOH . I 8 HOH B 80 1602 602 HOH HOH . I 8 HOH B 81 1604 604 HOH HOH . I 8 HOH B 82 1605 605 HOH HOH . I 8 HOH B 83 1607 607 HOH HOH . I 8 HOH B 84 1608 608 HOH HOH . I 8 HOH B 85 1609 609 HOH HOH . I 8 HOH B 86 1610 610 HOH HOH . I 8 HOH B 87 1612 612 HOH HOH . I 8 HOH B 88 1617 617 HOH HOH . I 8 HOH B 89 1625 625 HOH HOH . I 8 HOH B 90 1626 626 HOH HOH . I 8 HOH B 91 1628 628 HOH HOH . I 8 HOH B 92 1632 632 HOH HOH . I 8 HOH B 93 1634 634 HOH HOH . I 8 HOH B 94 1635 635 HOH HOH . I 8 HOH B 95 1638 638 HOH HOH . I 8 HOH B 96 1639 639 HOH HOH . I 8 HOH B 97 1641 641 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 8.87 _atom_site.Cartn_y 37.452 _atom_site.Cartn_z 39.641 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.85 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 231 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #