data_2A5G # _model_server_result.job_id fjwHFCec7qzRh2OXjL4qrw _model_server_result.datetime_utc '2024-11-25 13:20:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2a5g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":231}' # _entry.id 2A5G # _exptl.entry_id 2A5G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 107.38 _cell.angle_beta 101.72 _cell.angle_gamma 102.94 _cell.entry_id 2A5G _cell.length_a 38.067 _cell.length_b 44.484 _cell.length_c 56.045 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2A5G _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 27 A THR 27 1_555 C MG MG . A MG 231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc2 A OG1 THR 44 A THR 44 1_555 C MG MG . A MG 231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? metalc ? metalc3 D O2B GTP . A GTP 230 1_555 C MG MG . A MG 231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? metalc ? metalc4 D O2G GTP . A GTP 230 1_555 C MG MG . A MG 231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc5 C MG MG . A MG 231 1_555 F O HOH . A HOH 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc6 B OG1 THR 91 B THR 90 1_555 E NA NA . B NA 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc7 B O THR 91 B THR 90 1_555 E NA NA . B NA 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.999 ? metalc ? metalc8 B O TYR 151 B TYR 150 1_555 E NA NA . B NA 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc9 B O LEU 154 B LEU 153 1_555 E NA NA . B NA 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2A5G _atom_sites.fract_transf_matrix[1][1] 0.026269 _atom_sites.fract_transf_matrix[1][2] 0.006036 _atom_sites.fract_transf_matrix[1][3] 0.00818 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023066 _atom_sites.fract_transf_matrix[2][3] 0.008922 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019539 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG A 1 231 231 MG MG . D 4 GTP A 1 230 230 GTP GTP . E 5 NA B 1 242 242 NA NA . F 6 HOH A 1 232 232 HOH HOH . F 6 HOH A 2 233 233 HOH HOH . F 6 HOH A 3 234 234 HOH HOH . F 6 HOH A 4 235 235 HOH HOH . F 6 HOH A 5 236 236 HOH HOH . F 6 HOH A 6 237 237 HOH HOH . F 6 HOH A 7 249 249 HOH HOH . F 6 HOH A 8 250 250 HOH HOH . F 6 HOH A 9 251 251 HOH HOH . F 6 HOH A 10 252 252 HOH HOH . F 6 HOH A 11 253 253 HOH HOH . F 6 HOH A 12 254 254 HOH HOH . F 6 HOH A 13 255 255 HOH HOH . F 6 HOH A 14 257 257 HOH HOH . F 6 HOH A 15 258 258 HOH HOH . F 6 HOH A 16 259 259 HOH HOH . F 6 HOH A 17 260 260 HOH HOH . F 6 HOH A 18 263 263 HOH HOH . F 6 HOH A 19 264 264 HOH HOH . F 6 HOH A 20 265 265 HOH HOH . F 6 HOH A 21 273 273 HOH HOH . F 6 HOH A 22 274 274 HOH HOH . F 6 HOH A 23 278 278 HOH HOH . F 6 HOH A 24 279 279 HOH HOH . F 6 HOH A 25 280 280 HOH HOH . F 6 HOH A 26 281 281 HOH HOH . F 6 HOH A 27 282 282 HOH HOH . F 6 HOH A 28 283 283 HOH HOH . F 6 HOH A 29 284 284 HOH HOH . F 6 HOH A 30 285 285 HOH HOH . F 6 HOH A 31 286 286 HOH HOH . F 6 HOH A 32 288 288 HOH HOH . F 6 HOH A 33 289 289 HOH HOH . F 6 HOH A 34 290 290 HOH HOH . G 6 HOH B 1 238 238 HOH HOH . G 6 HOH B 2 240 240 HOH HOH . G 6 HOH B 3 241 241 HOH HOH . G 6 HOH B 4 243 243 HOH HOH . G 6 HOH B 5 256 256 HOH HOH . G 6 HOH B 6 261 261 HOH HOH . G 6 HOH B 7 262 262 HOH HOH . G 6 HOH B 8 266 266 HOH HOH . G 6 HOH B 9 267 267 HOH HOH . G 6 HOH B 10 268 268 HOH HOH . G 6 HOH B 11 269 269 HOH HOH . G 6 HOH B 12 270 270 HOH HOH . G 6 HOH B 13 271 271 HOH HOH . G 6 HOH B 14 272 272 HOH HOH . G 6 HOH B 15 275 275 HOH HOH . G 6 HOH B 16 276 276 HOH HOH . G 6 HOH B 17 277 277 HOH HOH . G 6 HOH B 18 287 287 HOH HOH . G 6 HOH B 19 291 291 HOH HOH . G 6 HOH B 20 292 292 HOH HOH . G 6 HOH B 21 293 293 HOH HOH . G 6 HOH B 22 294 294 HOH HOH . G 6 HOH B 23 295 295 HOH HOH . G 6 HOH B 24 296 296 HOH HOH . G 6 HOH B 25 297 297 HOH HOH . G 6 HOH B 26 298 298 HOH HOH . G 6 HOH B 27 299 299 HOH HOH . G 6 HOH B 28 300 300 HOH HOH . G 6 HOH B 29 301 301 HOH HOH . G 6 HOH B 30 302 302 HOH HOH . G 6 HOH B 31 303 303 HOH HOH . G 6 HOH B 32 304 304 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -3.938 _atom_site.Cartn_y -5.473 _atom_site.Cartn_z 4.698 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.35 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 231 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 248 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #