data_2A5X # _model_server_result.job_id yoS5zarBMakmEWEzlWKgvw _model_server_result.datetime_utc '2024-11-15 20:27:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2a5x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":377}' # _entry.id 2A5X # _exptl.entry_id 2A5X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.62 _cell.angle_gamma 90 _cell.entry_id 2A5X _cell.length_a 207.377 _cell.length_b 54.372 _cell.length_c 36.2 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2A5X _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -5.425673 0 35.791089 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLN 263 A GLN 263 1_555 C CA CA . A CA 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc2 A OG SER 265 A SER 265 1_555 C CA CA . A CA 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? metalc ? metalc3 B CA CA . A CA 376 1_555 D O2G ANP . A ANP 378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc4 B CA CA . A CA 376 1_555 D O1B ANP . A ANP 378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc5 B CA CA . A CA 376 1_555 I O HOH . A HOH 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc6 C CA CA . A CA 377 1_555 I O HOH . A HOH 383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc7 C CA CA . A CA 377 1_555 I O HOH . A HOH 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc8 C CA CA . A CA 377 1_555 I O HOH . A HOH 385 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.678 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2A5X _atom_sites.fract_transf_matrix[1][1] 0.004822 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000731 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018392 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02794 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 376 1 CA CA . C 2 CA A 1 377 7 CA CA . D 3 ANP A 1 378 2 ANP ANP . E 4 LAR A 1 379 3 LAR LAR . F 5 NSB A 1 380 6 NSB NSB . G 6 MPD A 1 381 4 MPD MPD . H 6 MPD A 1 382 5 MPD MPD . I 7 HOH A 1 383 8 HOH HOH . I 7 HOH A 2 384 9 HOH HOH . I 7 HOH A 3 385 10 HOH HOH . I 7 HOH A 4 386 11 HOH HOH . I 7 HOH A 5 387 12 HOH HOH . I 7 HOH A 6 388 13 HOH HOH . I 7 HOH A 7 389 14 HOH HOH . I 7 HOH A 8 390 15 HOH HOH . I 7 HOH A 9 391 16 HOH HOH . I 7 HOH A 10 392 17 HOH HOH . I 7 HOH A 11 393 18 HOH HOH . I 7 HOH A 12 394 19 HOH HOH . I 7 HOH A 13 395 20 HOH HOH . I 7 HOH A 14 396 22 HOH HOH . I 7 HOH A 15 397 23 HOH HOH . I 7 HOH A 16 398 24 HOH HOH . I 7 HOH A 17 399 25 HOH HOH . I 7 HOH A 18 400 26 HOH HOH . I 7 HOH A 19 401 27 HOH HOH . I 7 HOH A 20 402 28 HOH HOH . I 7 HOH A 21 403 29 HOH HOH . I 7 HOH A 22 404 30 HOH HOH . I 7 HOH A 23 405 31 HOH HOH . I 7 HOH A 24 406 32 HOH HOH . I 7 HOH A 25 407 33 HOH HOH . I 7 HOH A 26 408 34 HOH HOH . I 7 HOH A 27 409 35 HOH HOH . I 7 HOH A 28 410 36 HOH HOH . I 7 HOH A 29 411 37 HOH HOH . I 7 HOH A 30 412 38 HOH HOH . I 7 HOH A 31 413 39 HOH HOH . I 7 HOH A 32 414 40 HOH HOH . I 7 HOH A 33 415 41 HOH HOH . I 7 HOH A 34 416 42 HOH HOH . I 7 HOH A 35 417 43 HOH HOH . I 7 HOH A 36 418 44 HOH HOH . I 7 HOH A 37 419 45 HOH HOH . I 7 HOH A 38 420 46 HOH HOH . I 7 HOH A 39 421 47 HOH HOH . I 7 HOH A 40 422 48 HOH HOH . I 7 HOH A 41 423 49 HOH HOH . I 7 HOH A 42 424 50 HOH HOH . I 7 HOH A 43 425 51 HOH HOH . I 7 HOH A 44 426 52 HOH HOH . I 7 HOH A 45 427 53 HOH HOH . I 7 HOH A 46 428 54 HOH HOH . I 7 HOH A 47 429 55 HOH HOH . I 7 HOH A 48 430 56 HOH HOH . I 7 HOH A 49 431 57 HOH HOH . I 7 HOH A 50 432 58 HOH HOH . I 7 HOH A 51 433 59 HOH HOH . I 7 HOH A 52 434 60 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 7.08 _atom_site.Cartn_y 64.122 _atom_site.Cartn_z 10.228 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 44.63 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 377 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #