data_2A78 # _model_server_result.job_id PT4WEEpy9MNr89VRueDcFw _model_server_result.datetime_utc '2024-11-04 20:34:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2a78 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":500}' # _entry.id 2A78 # _exptl.entry_id 2A78 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.1 _cell.angle_gamma 90 _cell.entry_id 2A78 _cell.length_a 34.94 _cell.length_b 112.83 _cell.length_c 56.35 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2A78 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 32 A SER 28 1_555 C MG MG . A MG 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc2 C MG MG . A MG 400 1_555 D O3B GDP . A GDP 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? metalc ? metalc3 C MG MG . A MG 400 1_555 E O HOH . A HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc4 C MG MG . A MG 400 1_555 E O HOH . A HOH 517 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc5 C MG MG . A MG 400 1_555 E O HOH . A HOH 653 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? metalc ? metalc6 C MG MG . A MG 400 1_555 E O HOH . A HOH 657 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 83 n n PB O2B GDP sing 84 n n PB O3B GDP sing 85 n n PB O3A GDP sing 86 n n O2B HOB2 GDP sing 87 n n O3B HOB3 GDP sing 88 n n O3A PA GDP sing 89 n n PA O1A GDP doub 90 n n PA O2A GDP sing 91 n n PA O5' GDP sing 92 n n O2A HOA2 GDP sing 93 n n O5' C5' GDP sing 94 n n C5' C4' GDP sing 95 n n C5' H5' GDP sing 96 n n C5' "H5''" GDP sing 97 n n C4' O4' GDP sing 98 n n C4' C3' GDP sing 99 n n C4' H4' GDP sing 100 n n O4' C1' GDP sing 101 n n C3' O3' GDP sing 102 n n C3' C2' GDP sing 103 n n C3' H3' GDP sing 104 n n O3' HO3' GDP sing 105 n n C2' O2' GDP sing 106 n n C2' C1' GDP sing 107 n n C2' H2' GDP sing 108 n n O2' HO2' GDP sing 109 n n C1' N9 GDP sing 110 n n C1' H1' GDP sing 111 n n N9 C8 GDP sing 112 n y N9 C4 GDP sing 113 n y C8 N7 GDP doub 114 n y C8 H8 GDP sing 115 n n N7 C5 GDP sing 116 n y C5 C6 GDP sing 117 n n C5 C4 GDP doub 118 n y C6 O6 GDP doub 119 n n C6 N1 GDP sing 120 n n N1 C2 GDP sing 121 n n N1 HN1 GDP sing 122 n n C2 N2 GDP sing 123 n n C2 N3 GDP doub 124 n n N2 HN21 GDP sing 125 n n N2 HN22 GDP sing 126 n n N3 C4 GDP sing 127 n n # _atom_sites.entry_id 2A78 _atom_sites.fract_transf_matrix[1][1] 0.02862 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007722 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008863 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018381 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG A 1 400 400 MG MG . D 4 GDP A 1 500 500 GDP GDP . E 5 HOH A 1 501 1 HOH HOH . E 5 HOH A 2 502 3 HOH HOH . E 5 HOH A 3 503 4 HOH HOH . E 5 HOH A 4 504 5 HOH HOH . E 5 HOH A 5 505 8 HOH HOH . E 5 HOH A 6 506 11 HOH HOH . E 5 HOH A 7 507 13 HOH HOH . E 5 HOH A 8 508 17 HOH HOH . E 5 HOH A 9 509 21 HOH HOH . E 5 HOH A 10 510 22 HOH HOH . E 5 HOH A 11 511 26 HOH HOH . E 5 HOH A 12 512 28 HOH HOH . E 5 HOH A 13 513 30 HOH HOH . E 5 HOH A 14 514 32 HOH HOH . E 5 HOH A 15 515 33 HOH HOH . E 5 HOH A 16 516 35 HOH HOH . E 5 HOH A 17 517 38 HOH HOH . E 5 HOH A 18 518 39 HOH HOH . E 5 HOH A 19 519 40 HOH HOH . E 5 HOH A 20 520 42 HOH HOH . E 5 HOH A 21 521 43 HOH HOH . E 5 HOH A 22 522 44 HOH HOH . E 5 HOH A 23 523 46 HOH HOH . E 5 HOH A 24 524 49 HOH HOH . E 5 HOH A 25 525 51 HOH HOH . E 5 HOH A 26 526 53 HOH HOH . E 5 HOH A 27 527 55 HOH HOH . E 5 HOH A 28 528 58 HOH HOH . E 5 HOH A 29 529 60 HOH HOH . E 5 HOH A 30 530 64 HOH HOH . E 5 HOH A 31 531 66 HOH HOH . E 5 HOH A 32 532 67 HOH HOH . E 5 HOH A 33 533 68 HOH HOH . E 5 HOH A 34 534 70 HOH HOH . E 5 HOH A 35 535 72 HOH HOH . E 5 HOH A 36 536 76 HOH HOH . E 5 HOH A 37 537 78 HOH HOH . E 5 HOH A 38 538 79 HOH HOH . E 5 HOH A 39 539 82 HOH HOH . E 5 HOH A 40 540 85 HOH HOH . E 5 HOH A 41 541 86 HOH HOH . E 5 HOH A 42 542 91 HOH HOH . E 5 HOH A 43 543 93 HOH HOH . E 5 HOH A 44 544 97 HOH HOH . E 5 HOH A 45 545 98 HOH HOH . E 5 HOH A 46 546 99 HOH HOH . E 5 HOH A 47 547 100 HOH HOH . E 5 HOH A 48 548 101 HOH HOH . E 5 HOH A 49 549 103 HOH HOH . E 5 HOH A 50 550 105 HOH HOH . E 5 HOH A 51 551 106 HOH HOH . E 5 HOH A 52 552 107 HOH HOH . E 5 HOH A 53 553 108 HOH HOH . E 5 HOH A 54 554 109 HOH HOH . E 5 HOH A 55 555 111 HOH HOH . E 5 HOH A 56 556 113 HOH HOH . E 5 HOH A 57 557 120 HOH HOH . E 5 HOH A 58 558 123 HOH HOH . E 5 HOH A 59 559 124 HOH HOH . E 5 HOH A 60 560 125 HOH HOH . E 5 HOH A 61 561 126 HOH HOH . E 5 HOH A 62 562 133 HOH HOH . E 5 HOH A 63 563 135 HOH HOH . E 5 HOH A 64 564 138 HOH HOH . E 5 HOH A 65 565 139 HOH HOH . E 5 HOH A 66 566 140 HOH HOH . E 5 HOH A 67 567 144 HOH HOH . E 5 HOH A 68 568 147 HOH HOH . E 5 HOH A 69 569 148 HOH HOH . E 5 HOH A 70 570 149 HOH HOH . E 5 HOH A 71 571 150 HOH HOH . E 5 HOH A 72 572 151 HOH HOH . E 5 HOH A 73 573 152 HOH HOH . E 5 HOH A 74 574 153 HOH HOH . E 5 HOH A 75 575 154 HOH HOH . E 5 HOH A 76 576 156 HOH HOH . E 5 HOH A 77 577 157 HOH HOH . E 5 HOH A 78 578 158 HOH HOH . E 5 HOH A 79 579 162 HOH HOH . E 5 HOH A 80 580 165 HOH HOH . E 5 HOH A 81 581 166 HOH HOH . E 5 HOH A 82 582 168 HOH HOH . E 5 HOH A 83 583 169 HOH HOH . E 5 HOH A 84 584 172 HOH HOH . E 5 HOH A 85 585 173 HOH HOH . E 5 HOH A 86 586 175 HOH HOH . E 5 HOH A 87 587 179 HOH HOH . E 5 HOH A 88 588 180 HOH HOH . E 5 HOH A 89 589 181 HOH HOH . E 5 HOH A 90 590 182 HOH HOH . E 5 HOH A 91 591 183 HOH HOH . E 5 HOH A 92 592 184 HOH HOH . E 5 HOH A 93 593 185 HOH HOH . E 5 HOH A 94 594 192 HOH HOH . E 5 HOH A 95 595 193 HOH HOH . E 5 HOH A 96 596 194 HOH HOH . E 5 HOH A 97 597 195 HOH HOH . E 5 HOH A 98 598 197 HOH HOH . E 5 HOH A 99 599 198 HOH HOH . E 5 HOH A 100 600 199 HOH HOH . E 5 HOH A 101 601 201 HOH HOH . E 5 HOH A 102 602 202 HOH HOH . E 5 HOH A 103 603 203 HOH HOH . E 5 HOH A 104 604 204 HOH HOH . E 5 HOH A 105 605 205 HOH HOH . E 5 HOH A 106 606 207 HOH HOH . E 5 HOH A 107 607 211 HOH HOH . E 5 HOH A 108 608 213 HOH HOH . E 5 HOH A 109 609 217 HOH HOH . E 5 HOH A 110 610 228 HOH HOH . E 5 HOH A 111 611 230 HOH HOH . E 5 HOH A 112 612 234 HOH HOH . E 5 HOH A 113 613 235 HOH HOH . E 5 HOH A 114 614 239 HOH HOH . E 5 HOH A 115 615 240 HOH HOH . E 5 HOH A 116 616 244 HOH HOH . E 5 HOH A 117 617 246 HOH HOH . E 5 HOH A 118 618 247 HOH HOH . E 5 HOH A 119 619 251 HOH HOH . E 5 HOH A 120 620 253 HOH HOH . E 5 HOH A 121 621 254 HOH HOH . E 5 HOH A 122 622 255 HOH HOH . E 5 HOH A 123 623 256 HOH HOH . E 5 HOH A 124 624 257 HOH HOH . E 5 HOH A 125 625 258 HOH HOH . E 5 HOH A 126 626 259 HOH HOH . E 5 HOH A 127 627 262 HOH HOH . E 5 HOH A 128 628 263 HOH HOH . E 5 HOH A 129 629 265 HOH HOH . E 5 HOH A 130 630 268 HOH HOH . E 5 HOH A 131 631 269 HOH HOH . E 5 HOH A 132 632 272 HOH HOH . E 5 HOH A 133 633 274 HOH HOH . E 5 HOH A 134 634 275 HOH HOH . E 5 HOH A 135 635 276 HOH HOH . E 5 HOH A 136 636 277 HOH HOH . E 5 HOH A 137 637 281 HOH HOH . E 5 HOH A 138 638 282 HOH HOH . E 5 HOH A 139 639 283 HOH HOH . E 5 HOH A 140 640 284 HOH HOH . E 5 HOH A 141 641 285 HOH HOH . E 5 HOH A 142 642 289 HOH HOH . E 5 HOH A 143 643 295 HOH HOH . E 5 HOH A 144 644 300 HOH HOH . E 5 HOH A 145 645 301 HOH HOH . E 5 HOH A 146 646 304 HOH HOH . E 5 HOH A 147 647 310 HOH HOH . E 5 HOH A 148 648 312 HOH HOH . E 5 HOH A 149 649 313 HOH HOH . E 5 HOH A 150 650 314 HOH HOH . E 5 HOH A 151 651 315 HOH HOH . E 5 HOH A 152 652 316 HOH HOH . E 5 HOH A 153 653 317 HOH HOH . E 5 HOH A 154 654 320 HOH HOH . E 5 HOH A 155 655 325 HOH HOH . E 5 HOH A 156 656 327 HOH HOH . E 5 HOH A 157 657 332 HOH HOH . E 5 HOH A 158 658 334 HOH HOH . E 5 HOH A 159 659 335 HOH HOH . E 5 HOH A 160 660 336 HOH HOH . F 5 HOH B 1 252 2 HOH HOH . F 5 HOH B 2 253 6 HOH HOH . F 5 HOH B 3 254 7 HOH HOH . F 5 HOH B 4 255 9 HOH HOH . F 5 HOH B 5 256 10 HOH HOH . F 5 HOH B 6 257 12 HOH HOH . F 5 HOH B 7 258 14 HOH HOH . F 5 HOH B 8 259 15 HOH HOH . F 5 HOH B 9 260 16 HOH HOH . F 5 HOH B 10 261 18 HOH HOH . F 5 HOH B 11 262 19 HOH HOH . F 5 HOH B 12 263 20 HOH HOH . F 5 HOH B 13 264 23 HOH HOH . F 5 HOH B 14 265 24 HOH HOH . F 5 HOH B 15 266 25 HOH HOH . F 5 HOH B 16 267 27 HOH HOH . F 5 HOH B 17 268 29 HOH HOH . F 5 HOH B 18 269 31 HOH HOH . F 5 HOH B 19 270 34 HOH HOH . F 5 HOH B 20 271 36 HOH HOH . F 5 HOH B 21 272 37 HOH HOH . F 5 HOH B 22 273 41 HOH HOH . F 5 HOH B 23 274 45 HOH HOH . F 5 HOH B 24 275 47 HOH HOH . F 5 HOH B 25 276 48 HOH HOH . F 5 HOH B 26 277 50 HOH HOH . F 5 HOH B 27 278 52 HOH HOH . F 5 HOH B 28 279 54 HOH HOH . F 5 HOH B 29 280 56 HOH HOH . F 5 HOH B 30 281 57 HOH HOH . F 5 HOH B 31 282 59 HOH HOH . F 5 HOH B 32 283 61 HOH HOH . F 5 HOH B 33 284 62 HOH HOH . F 5 HOH B 34 285 63 HOH HOH . F 5 HOH B 35 286 65 HOH HOH . F 5 HOH B 36 287 69 HOH HOH . F 5 HOH B 37 288 71 HOH HOH . F 5 HOH B 38 289 73 HOH HOH . F 5 HOH B 39 290 74 HOH HOH . F 5 HOH B 40 291 75 HOH HOH . F 5 HOH B 41 292 77 HOH HOH . F 5 HOH B 42 293 80 HOH HOH . F 5 HOH B 43 294 81 HOH HOH . F 5 HOH B 44 295 83 HOH HOH . F 5 HOH B 45 296 84 HOH HOH . F 5 HOH B 46 297 87 HOH HOH . F 5 HOH B 47 298 88 HOH HOH . F 5 HOH B 48 299 89 HOH HOH . F 5 HOH B 49 300 90 HOH HOH . F 5 HOH B 50 301 92 HOH HOH . F 5 HOH B 51 302 94 HOH HOH . F 5 HOH B 52 303 95 HOH HOH . F 5 HOH B 53 304 96 HOH HOH . F 5 HOH B 54 305 102 HOH HOH . F 5 HOH B 55 306 104 HOH HOH . F 5 HOH B 56 307 112 HOH HOH . F 5 HOH B 57 308 114 HOH HOH . F 5 HOH B 58 309 115 HOH HOH . F 5 HOH B 59 310 116 HOH HOH . F 5 HOH B 60 311 117 HOH HOH . F 5 HOH B 61 312 118 HOH HOH . F 5 HOH B 62 313 119 HOH HOH . F 5 HOH B 63 314 121 HOH HOH . F 5 HOH B 64 315 122 HOH HOH . F 5 HOH B 65 316 127 HOH HOH . F 5 HOH B 66 317 128 HOH HOH . F 5 HOH B 67 318 129 HOH HOH . F 5 HOH B 68 319 130 HOH HOH . F 5 HOH B 69 320 131 HOH HOH . F 5 HOH B 70 321 132 HOH HOH . F 5 HOH B 71 322 136 HOH HOH . F 5 HOH B 72 323 137 HOH HOH . F 5 HOH B 73 324 141 HOH HOH . F 5 HOH B 74 325 142 HOH HOH . F 5 HOH B 75 326 143 HOH HOH . F 5 HOH B 76 327 145 HOH HOH . F 5 HOH B 77 328 146 HOH HOH . F 5 HOH B 78 329 155 HOH HOH . F 5 HOH B 79 330 160 HOH HOH . F 5 HOH B 80 331 161 HOH HOH . F 5 HOH B 81 332 163 HOH HOH . F 5 HOH B 82 333 164 HOH HOH . F 5 HOH B 83 334 167 HOH HOH . F 5 HOH B 84 335 170 HOH HOH . F 5 HOH B 85 336 171 HOH HOH . F 5 HOH B 86 337 174 HOH HOH . F 5 HOH B 87 338 176 HOH HOH . F 5 HOH B 88 339 177 HOH HOH . F 5 HOH B 89 340 178 HOH HOH . F 5 HOH B 90 341 186 HOH HOH . F 5 HOH B 91 342 187 HOH HOH . F 5 HOH B 92 343 188 HOH HOH . F 5 HOH B 93 344 189 HOH HOH . F 5 HOH B 94 345 190 HOH HOH . F 5 HOH B 95 346 191 HOH HOH . F 5 HOH B 96 347 196 HOH HOH . F 5 HOH B 97 348 200 HOH HOH . F 5 HOH B 98 349 206 HOH HOH . F 5 HOH B 99 350 208 HOH HOH . F 5 HOH B 100 351 209 HOH HOH . F 5 HOH B 101 352 210 HOH HOH . F 5 HOH B 102 353 212 HOH HOH . F 5 HOH B 103 354 214 HOH HOH . F 5 HOH B 104 355 215 HOH HOH . F 5 HOH B 105 356 216 HOH HOH . F 5 HOH B 106 357 218 HOH HOH . F 5 HOH B 107 358 219 HOH HOH . F 5 HOH B 108 359 220 HOH HOH . F 5 HOH B 109 360 221 HOH HOH . F 5 HOH B 110 361 222 HOH HOH . F 5 HOH B 111 362 223 HOH HOH . F 5 HOH B 112 363 224 HOH HOH . F 5 HOH B 113 364 225 HOH HOH . F 5 HOH B 114 365 226 HOH HOH . F 5 HOH B 115 366 229 HOH HOH . F 5 HOH B 116 367 231 HOH HOH . F 5 HOH B 117 368 232 HOH HOH . F 5 HOH B 118 369 233 HOH HOH . F 5 HOH B 119 370 236 HOH HOH . F 5 HOH B 120 371 237 HOH HOH . F 5 HOH B 121 372 238 HOH HOH . F 5 HOH B 122 373 241 HOH HOH . F 5 HOH B 123 374 242 HOH HOH . F 5 HOH B 124 375 243 HOH HOH . F 5 HOH B 125 376 245 HOH HOH . F 5 HOH B 126 377 248 HOH HOH . F 5 HOH B 127 378 249 HOH HOH . F 5 HOH B 128 379 250 HOH HOH . F 5 HOH B 129 380 252 HOH HOH . F 5 HOH B 130 381 260 HOH HOH . F 5 HOH B 131 382 261 HOH HOH . F 5 HOH B 132 383 264 HOH HOH . F 5 HOH B 133 384 266 HOH HOH . F 5 HOH B 134 385 267 HOH HOH . F 5 HOH B 135 386 270 HOH HOH . F 5 HOH B 136 387 271 HOH HOH . F 5 HOH B 137 388 273 HOH HOH . F 5 HOH B 138 389 278 HOH HOH . F 5 HOH B 139 390 279 HOH HOH . F 5 HOH B 140 391 280 HOH HOH . F 5 HOH B 141 392 286 HOH HOH . F 5 HOH B 142 393 287 HOH HOH . F 5 HOH B 143 394 288 HOH HOH . F 5 HOH B 144 395 290 HOH HOH . F 5 HOH B 145 396 292 HOH HOH . F 5 HOH B 146 397 293 HOH HOH . F 5 HOH B 147 398 294 HOH HOH . F 5 HOH B 148 399 296 HOH HOH . F 5 HOH B 149 400 297 HOH HOH . F 5 HOH B 150 401 298 HOH HOH . F 5 HOH B 151 402 299 HOH HOH . F 5 HOH B 152 403 302 HOH HOH . F 5 HOH B 153 404 303 HOH HOH . F 5 HOH B 154 405 305 HOH HOH . F 5 HOH B 155 406 306 HOH HOH . F 5 HOH B 156 407 307 HOH HOH . F 5 HOH B 157 408 308 HOH HOH . F 5 HOH B 158 409 309 HOH HOH . F 5 HOH B 159 410 311 HOH HOH . F 5 HOH B 160 411 319 HOH HOH . F 5 HOH B 161 412 321 HOH HOH . F 5 HOH B 162 413 322 HOH HOH . F 5 HOH B 163 414 323 HOH HOH . F 5 HOH B 164 415 324 HOH HOH . F 5 HOH B 165 416 326 HOH HOH . F 5 HOH B 166 417 328 HOH HOH . F 5 HOH B 167 418 329 HOH HOH . F 5 HOH B 168 419 330 HOH HOH . F 5 HOH B 169 420 331 HOH HOH . F 5 HOH B 170 421 333 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . D 4 16.743 6.859 14.987 1 8.75 ? PB GDP 500 A 1 HETATM 2 O O1B GDP . . . D 4 16.349 8.132 15.68 1 8.31 ? O1B GDP 500 A 1 HETATM 3 O O2B GDP . . . D 4 15.51 6.104 14.565 1 8.79 ? O2B GDP 500 A 1 HETATM 4 O O3B GDP . . . D 4 17.647 7.184 13.827 1 7.25 ? O3B GDP 500 A 1 HETATM 5 O O3A GDP . . . D 4 17.517 5.935 16.047 1 9.93 ? O3A GDP 500 A 1 HETATM 6 P PA GDP . . . D 4 19.096 5.979 16.321 1 11.09 ? PA GDP 500 A 1 HETATM 7 O O1A GDP . . . D 4 19.855 5.184 15.297 1 11.04 ? O1A GDP 500 A 1 HETATM 8 O O2A GDP . . . D 4 19.612 7.387 16.472 1 13.33 ? O2A GDP 500 A 1 HETATM 9 O O5' GDP . . . D 4 19.183 5.239 17.738 1 12.44 ? O5' GDP 500 A 1 HETATM 10 C C5' GDP . . . D 4 18.554 5.789 18.903 1 11.48 ? C5' GDP 500 A 1 HETATM 11 C C4' GDP . . . D 4 19.336 5.328 20.131 1 12.87 ? C4' GDP 500 A 1 HETATM 12 O O4' GDP . . . D 4 19.253 3.901 20.232 1 12.51 ? O4' GDP 500 A 1 HETATM 13 C C3' GDP . . . D 4 20.819 5.645 19.983 1 13.66 ? C3' GDP 500 A 1 HETATM 14 O O3' GDP . . . D 4 21.356 5.876 21.292 1 13.83 ? O3' GDP 500 A 1 HETATM 15 C C2' GDP . . . D 4 21.403 4.384 19.369 1 12.69 ? C2' GDP 500 A 1 HETATM 16 O O2' GDP . . . D 4 22.787 4.211 19.685 1 14.63 ? O2' GDP 500 A 1 HETATM 17 C C1' GDP . . . D 4 20.54 3.311 20.018 1 11.93 ? C1' GDP 500 A 1 HETATM 18 N N9 GDP . . . D 4 20.333 2.104 19.199 1 11.35 ? N9 GDP 500 A 1 HETATM 19 C C8 GDP . . . D 4 19.991 2.029 17.9 1 10.97 ? C8 GDP 500 A 1 HETATM 20 N N7 GDP . . . D 4 19.872 0.735 17.514 1 10.9 ? N7 GDP 500 A 1 HETATM 21 C C5 GDP . . . D 4 20.133 -0.025 18.595 1 11.46 ? C5 GDP 500 A 1 HETATM 22 C C6 GDP . . . D 4 20.174 -1.464 18.901 1 11.28 ? C6 GDP 500 A 1 HETATM 23 O O6 GDP . . . D 4 19.93 -2.29 17.994 1 11.52 ? O6 GDP 500 A 1 HETATM 24 N N1 GDP . . . D 4 20.484 -1.836 20.156 1 10.96 ? N1 GDP 500 A 1 HETATM 25 C C2 GDP . . . D 4 20.753 -0.953 21.138 1 11.87 ? C2 GDP 500 A 1 HETATM 26 N N2 GDP . . . D 4 21.051 -1.408 22.378 1 12.01 ? N2 GDP 500 A 1 HETATM 27 N N3 GDP . . . D 4 20.728 0.387 20.932 1 11.68 ? N3 GDP 500 A 1 HETATM 28 C C4 GDP . . . D 4 20.427 0.883 19.705 1 11.53 ? C4 GDP 500 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #