data_2A7A # _model_server_result.job_id 572QHmM_LNwHUceNHZg0Hw _model_server_result.datetime_utc '2024-11-15 00:28:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2a7a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":307}' # _entry.id 2A7A # _exptl.entry_id 2A7A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 131.293 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description XENON _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2A7A _cell.length_a 61.968 _cell.length_b 85.059 _cell.length_c 88.367 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2A7A _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_765 -x+2,-y+1,z -1 0 0 0 -1 0 0 0 1 123.936 85.059 0 3 'crystal symmetry operation' 3_756 -x+2,y,-z+1 -1 0 0 0 1 0 0 0 -1 123.936 0 88.367 4 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1 0 0 0 -1 0 0 0 -1 0 85.059 88.367 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 8 A GLU 8 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc2 A OD2 ASP 10 A ASP 10 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc3 A OD1 ASP 10 A ASP 10 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? metalc ? metalc4 A OD2 ASP 10 A ASP 10 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? metalc ? metalc5 A O TYR 12 A TYR 12 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc6 A OD1 ASN 14 A ASN 14 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc7 A OD1 ASP 19 A ASP 19 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc8 A OD2 ASP 19 A ASP 19 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc9 A NE2 HIS 24 A HIS 24 1_555 B MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc10 B MN MN . A MN 301 1_555 I O HOH . A HOH 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc11 B MN MN . A MN 301 1_555 I O HOH . A HOH 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc12 C CA CA . A CA 302 1_555 I O HOH . A HOH 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc13 C CA CA . A CA 302 1_555 I O HOH . A HOH 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? # _chem_comp.formula Xe _chem_comp.formula_weight 131.293 _chem_comp.id XE _chem_comp.mon_nstd_flag . _chem_comp.name XENON _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2A7A _atom_sites.fract_transf_matrix[1][1] 0.016137 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011757 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011316 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 301 301 MN MN . C 3 CA A 1 302 302 CA CA . D 4 XE A 1 303 303 XE XE . E 4 XE A 1 304 304 XE XE . F 4 XE A 1 305 305 XE XE . G 4 XE A 1 306 306 XE XE . H 4 XE A 1 307 307 XE XE . I 5 HOH A 1 308 6 HOH HOH . I 5 HOH A 2 309 7 HOH HOH . I 5 HOH A 3 310 8 HOH HOH . I 5 HOH A 4 311 9 HOH HOH . I 5 HOH A 5 312 10 HOH HOH . I 5 HOH A 6 313 11 HOH HOH . I 5 HOH A 7 314 12 HOH HOH . I 5 HOH A 8 315 13 HOH HOH . I 5 HOH A 9 316 14 HOH HOH . I 5 HOH A 10 317 15 HOH HOH . I 5 HOH A 11 318 16 HOH HOH . I 5 HOH A 12 319 17 HOH HOH . I 5 HOH A 13 320 18 HOH HOH . I 5 HOH A 14 321 19 HOH HOH . I 5 HOH A 15 322 20 HOH HOH . I 5 HOH A 16 323 21 HOH HOH . I 5 HOH A 17 324 22 HOH HOH . I 5 HOH A 18 325 23 HOH HOH . I 5 HOH A 19 326 24 HOH HOH . I 5 HOH A 20 327 25 HOH HOH . I 5 HOH A 21 328 26 HOH HOH . I 5 HOH A 22 329 27 HOH HOH . I 5 HOH A 23 330 28 HOH HOH . I 5 HOH A 24 331 29 HOH HOH . I 5 HOH A 25 332 30 HOH HOH . I 5 HOH A 26 333 31 HOH HOH . I 5 HOH A 27 334 32 HOH HOH . I 5 HOH A 28 335 33 HOH HOH . I 5 HOH A 29 336 34 HOH HOH . I 5 HOH A 30 337 36 HOH HOH . I 5 HOH A 31 338 37 HOH HOH . I 5 HOH A 32 339 38 HOH HOH . I 5 HOH A 33 340 39 HOH HOH . I 5 HOH A 34 341 41 HOH HOH . I 5 HOH A 35 342 42 HOH HOH . I 5 HOH A 36 343 43 HOH HOH . I 5 HOH A 37 344 44 HOH HOH . I 5 HOH A 38 345 45 HOH HOH . I 5 HOH A 39 346 46 HOH HOH . I 5 HOH A 40 347 47 HOH HOH . I 5 HOH A 41 348 48 HOH HOH . I 5 HOH A 42 349 49 HOH HOH . I 5 HOH A 43 350 50 HOH HOH . I 5 HOH A 44 351 51 HOH HOH . I 5 HOH A 45 352 52 HOH HOH . I 5 HOH A 46 353 53 HOH HOH . I 5 HOH A 47 354 54 HOH HOH . I 5 HOH A 48 355 55 HOH HOH . I 5 HOH A 49 356 56 HOH HOH . I 5 HOH A 50 357 57 HOH HOH . I 5 HOH A 51 358 58 HOH HOH . I 5 HOH A 52 359 59 HOH HOH . I 5 HOH A 53 360 60 HOH HOH . I 5 HOH A 54 361 61 HOH HOH . I 5 HOH A 55 362 62 HOH HOH . I 5 HOH A 56 363 64 HOH HOH . I 5 HOH A 57 364 65 HOH HOH . I 5 HOH A 58 365 66 HOH HOH . I 5 HOH A 59 366 67 HOH HOH . I 5 HOH A 60 367 68 HOH HOH . I 5 HOH A 61 368 69 HOH HOH . I 5 HOH A 62 369 70 HOH HOH . I 5 HOH A 63 370 71 HOH HOH . I 5 HOH A 64 371 72 HOH HOH . I 5 HOH A 65 372 73 HOH HOH . I 5 HOH A 66 373 74 HOH HOH . I 5 HOH A 67 374 76 HOH HOH . I 5 HOH A 68 375 77 HOH HOH . I 5 HOH A 69 376 78 HOH HOH . I 5 HOH A 70 377 79 HOH HOH . I 5 HOH A 71 378 80 HOH HOH . I 5 HOH A 72 379 81 HOH HOH . I 5 HOH A 73 380 82 HOH HOH . I 5 HOH A 74 381 83 HOH HOH . I 5 HOH A 75 382 84 HOH HOH . I 5 HOH A 76 383 86 HOH HOH . I 5 HOH A 77 384 87 HOH HOH . I 5 HOH A 78 385 88 HOH HOH . I 5 HOH A 79 386 89 HOH HOH . I 5 HOH A 80 387 90 HOH HOH . I 5 HOH A 81 388 91 HOH HOH . I 5 HOH A 82 389 92 HOH HOH . I 5 HOH A 83 390 93 HOH HOH . I 5 HOH A 84 391 94 HOH HOH . I 5 HOH A 85 392 96 HOH HOH . I 5 HOH A 86 393 97 HOH HOH . I 5 HOH A 87 394 98 HOH HOH . I 5 HOH A 88 395 99 HOH HOH . I 5 HOH A 89 396 100 HOH HOH . I 5 HOH A 90 397 102 HOH HOH . I 5 HOH A 91 398 103 HOH HOH . I 5 HOH A 92 399 104 HOH HOH . I 5 HOH A 93 400 105 HOH HOH . I 5 HOH A 94 401 106 HOH HOH . I 5 HOH A 95 402 107 HOH HOH . I 5 HOH A 96 403 108 HOH HOH . I 5 HOH A 97 404 109 HOH HOH . I 5 HOH A 98 405 110 HOH HOH . I 5 HOH A 99 406 111 HOH HOH . I 5 HOH A 100 407 113 HOH HOH . I 5 HOH A 101 408 114 HOH HOH . I 5 HOH A 102 409 115 HOH HOH . I 5 HOH A 103 410 116 HOH HOH . I 5 HOH A 104 411 117 HOH HOH . I 5 HOH A 105 412 119 HOH HOH . I 5 HOH A 106 413 120 HOH HOH . I 5 HOH A 107 414 121 HOH HOH . I 5 HOH A 108 415 122 HOH HOH . I 5 HOH A 109 416 124 HOH HOH . I 5 HOH A 110 417 125 HOH HOH . I 5 HOH A 111 418 126 HOH HOH . I 5 HOH A 112 419 127 HOH HOH . I 5 HOH A 113 420 128 HOH HOH . I 5 HOH A 114 421 129 HOH HOH . I 5 HOH A 115 422 130 HOH HOH . I 5 HOH A 116 423 131 HOH HOH . I 5 HOH A 117 424 132 HOH HOH . I 5 HOH A 118 425 133 HOH HOH . I 5 HOH A 119 426 134 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol XE _atom_site.label_atom_id XE _atom_site.label_comp_id XE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 4 _atom_site.Cartn_x 50.425 _atom_site.Cartn_y 57.689 _atom_site.Cartn_z 45.024 _atom_site.occupancy 0.1 _atom_site.B_iso_or_equiv 2.54 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id XE _atom_site.auth_comp_id XE _atom_site.auth_seq_id 307 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #