data_2A7L # _model_server_result.job_id LnUj-k9M7equ-FeMJa_-MQ _model_server_result.datetime_utc '2024-11-16 05:05:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2a7l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 2A7L # _exptl.entry_id 2A7L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2A7L _cell.length_a 38.595 _cell.length_b 60.655 _cell.length_c 133.52 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2A7L _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 86 A ASP 67 1_555 C NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? metalc ? metalc2 A O SER 87 A SER 68 1_555 C NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? metalc ? metalc3 A OG SER 87 A SER 68 1_555 C NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.666 ? metalc ? metalc4 C NA NA . A NA 201 1_555 E O HOH . A HOH 233 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc5 C NA NA . A NA 201 1_555 E O HOH . A HOH 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc6 B OD1 ASP 86 B ASP 67 1_555 D NA NA . B NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc7 B O SER 87 B SER 68 1_555 D NA NA . B NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? metalc ? metalc8 B OG SER 87 B SER 68 1_555 D NA NA . B NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.751 ? metalc ? metalc9 D NA NA . B NA 202 1_555 F O HOH . B HOH 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc10 D NA NA . B NA 202 1_555 F O HOH . B HOH 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.761 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2A7L _atom_sites.fract_transf_matrix[1][1] 0.02591 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016487 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00749 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NA A 1 201 200 NA NA . D 2 NA B 1 202 200 NA NA . E 3 HOH A 1 202 2 HOH HOH . E 3 HOH A 2 203 3 HOH HOH . E 3 HOH A 3 204 5 HOH HOH . E 3 HOH A 4 205 7 HOH HOH . E 3 HOH A 5 206 9 HOH HOH . E 3 HOH A 6 207 11 HOH HOH . E 3 HOH A 7 208 13 HOH HOH . E 3 HOH A 8 209 15 HOH HOH . E 3 HOH A 9 210 17 HOH HOH . E 3 HOH A 10 211 18 HOH HOH . E 3 HOH A 11 212 20 HOH HOH . E 3 HOH A 12 213 24 HOH HOH . E 3 HOH A 13 214 26 HOH HOH . E 3 HOH A 14 215 27 HOH HOH . E 3 HOH A 15 216 28 HOH HOH . E 3 HOH A 16 217 29 HOH HOH . E 3 HOH A 17 218 33 HOH HOH . E 3 HOH A 18 219 34 HOH HOH . E 3 HOH A 19 220 37 HOH HOH . E 3 HOH A 20 221 39 HOH HOH . E 3 HOH A 21 222 41 HOH HOH . E 3 HOH A 22 223 43 HOH HOH . E 3 HOH A 23 224 44 HOH HOH . E 3 HOH A 24 225 45 HOH HOH . E 3 HOH A 25 226 46 HOH HOH . E 3 HOH A 26 227 47 HOH HOH . E 3 HOH A 27 228 48 HOH HOH . E 3 HOH A 28 229 49 HOH HOH . E 3 HOH A 29 230 52 HOH HOH . E 3 HOH A 30 231 53 HOH HOH . E 3 HOH A 31 232 55 HOH HOH . E 3 HOH A 32 233 56 HOH HOH . E 3 HOH A 33 234 57 HOH HOH . E 3 HOH A 34 235 58 HOH HOH . E 3 HOH A 35 236 61 HOH HOH . E 3 HOH A 36 237 62 HOH HOH . E 3 HOH A 37 238 69 HOH HOH . E 3 HOH A 38 239 72 HOH HOH . E 3 HOH A 39 240 75 HOH HOH . E 3 HOH A 40 241 76 HOH HOH . E 3 HOH A 41 242 77 HOH HOH . E 3 HOH A 42 243 78 HOH HOH . E 3 HOH A 43 244 80 HOH HOH . E 3 HOH A 44 245 81 HOH HOH . E 3 HOH A 45 246 82 HOH HOH . E 3 HOH A 46 247 85 HOH HOH . E 3 HOH A 47 248 89 HOH HOH . E 3 HOH A 48 249 90 HOH HOH . E 3 HOH A 49 250 91 HOH HOH . E 3 HOH A 50 251 92 HOH HOH . E 3 HOH A 51 252 94 HOH HOH . E 3 HOH A 52 253 96 HOH HOH . E 3 HOH A 53 254 97 HOH HOH . E 3 HOH A 54 255 98 HOH HOH . E 3 HOH A 55 256 102 HOH HOH . E 3 HOH A 56 257 105 HOH HOH . E 3 HOH A 57 258 108 HOH HOH . E 3 HOH A 58 259 110 HOH HOH . E 3 HOH A 59 260 111 HOH HOH . E 3 HOH A 60 261 113 HOH HOH . E 3 HOH A 61 262 115 HOH HOH . E 3 HOH A 62 263 116 HOH HOH . E 3 HOH A 63 264 119 HOH HOH . E 3 HOH A 64 265 123 HOH HOH . E 3 HOH A 65 266 124 HOH HOH . E 3 HOH A 66 267 125 HOH HOH . E 3 HOH A 67 268 127 HOH HOH . E 3 HOH A 68 269 128 HOH HOH . E 3 HOH A 69 270 129 HOH HOH . E 3 HOH A 70 271 131 HOH HOH . E 3 HOH A 71 272 134 HOH HOH . E 3 HOH A 72 273 135 HOH HOH . E 3 HOH A 73 274 136 HOH HOH . E 3 HOH A 74 275 139 HOH HOH . E 3 HOH A 75 276 140 HOH HOH . E 3 HOH A 76 277 141 HOH HOH . E 3 HOH A 77 278 143 HOH HOH . E 3 HOH A 78 279 145 HOH HOH . E 3 HOH A 79 280 146 HOH HOH . E 3 HOH A 80 281 147 HOH HOH . E 3 HOH A 81 282 148 HOH HOH . E 3 HOH A 82 283 149 HOH HOH . E 3 HOH A 83 284 150 HOH HOH . E 3 HOH A 84 285 157 HOH HOH . E 3 HOH A 85 286 159 HOH HOH . E 3 HOH A 86 287 164 HOH HOH . E 3 HOH A 87 288 168 HOH HOH . E 3 HOH A 88 289 170 HOH HOH . E 3 HOH A 89 290 174 HOH HOH . E 3 HOH A 90 291 175 HOH HOH . E 3 HOH A 91 292 183 HOH HOH . E 3 HOH A 92 293 186 HOH HOH . E 3 HOH A 93 294 189 HOH HOH . E 3 HOH A 94 295 190 HOH HOH . E 3 HOH A 95 296 191 HOH HOH . E 3 HOH A 96 297 192 HOH HOH . E 3 HOH A 97 298 194 HOH HOH . E 3 HOH A 98 299 195 HOH HOH . E 3 HOH A 99 300 198 HOH HOH . E 3 HOH A 100 301 199 HOH HOH . F 3 HOH B 1 203 1 HOH HOH . F 3 HOH B 2 204 4 HOH HOH . F 3 HOH B 3 205 6 HOH HOH . F 3 HOH B 4 206 8 HOH HOH . F 3 HOH B 5 207 10 HOH HOH . F 3 HOH B 6 208 12 HOH HOH . F 3 HOH B 7 209 14 HOH HOH . F 3 HOH B 8 210 16 HOH HOH . F 3 HOH B 9 211 19 HOH HOH . F 3 HOH B 10 212 21 HOH HOH . F 3 HOH B 11 213 22 HOH HOH . F 3 HOH B 12 214 23 HOH HOH . F 3 HOH B 13 215 25 HOH HOH . F 3 HOH B 14 216 30 HOH HOH . F 3 HOH B 15 217 31 HOH HOH . F 3 HOH B 16 218 32 HOH HOH . F 3 HOH B 17 219 35 HOH HOH . F 3 HOH B 18 220 36 HOH HOH . F 3 HOH B 19 221 38 HOH HOH . F 3 HOH B 20 222 40 HOH HOH . F 3 HOH B 21 223 42 HOH HOH . F 3 HOH B 22 224 50 HOH HOH . F 3 HOH B 23 225 51 HOH HOH . F 3 HOH B 24 226 54 HOH HOH . F 3 HOH B 25 227 59 HOH HOH . F 3 HOH B 26 228 60 HOH HOH . F 3 HOH B 27 229 63 HOH HOH . F 3 HOH B 28 230 64 HOH HOH . F 3 HOH B 29 231 65 HOH HOH . F 3 HOH B 30 232 66 HOH HOH . F 3 HOH B 31 233 67 HOH HOH . F 3 HOH B 32 234 68 HOH HOH . F 3 HOH B 33 235 70 HOH HOH . F 3 HOH B 34 236 71 HOH HOH . F 3 HOH B 35 237 73 HOH HOH . F 3 HOH B 36 238 74 HOH HOH . F 3 HOH B 37 239 79 HOH HOH . F 3 HOH B 38 240 83 HOH HOH . F 3 HOH B 39 241 84 HOH HOH . F 3 HOH B 40 242 86 HOH HOH . F 3 HOH B 41 243 87 HOH HOH . F 3 HOH B 42 244 88 HOH HOH . F 3 HOH B 43 245 93 HOH HOH . F 3 HOH B 44 246 95 HOH HOH . F 3 HOH B 45 247 99 HOH HOH . F 3 HOH B 46 248 100 HOH HOH . F 3 HOH B 47 249 101 HOH HOH . F 3 HOH B 48 250 103 HOH HOH . F 3 HOH B 49 251 104 HOH HOH . F 3 HOH B 50 252 106 HOH HOH . F 3 HOH B 51 253 107 HOH HOH . F 3 HOH B 52 254 109 HOH HOH . F 3 HOH B 53 255 112 HOH HOH . F 3 HOH B 54 256 114 HOH HOH . F 3 HOH B 55 257 117 HOH HOH . F 3 HOH B 56 258 118 HOH HOH . F 3 HOH B 57 259 120 HOH HOH . F 3 HOH B 58 260 121 HOH HOH . F 3 HOH B 59 261 122 HOH HOH . F 3 HOH B 60 262 126 HOH HOH . F 3 HOH B 61 263 130 HOH HOH . F 3 HOH B 62 264 132 HOH HOH . F 3 HOH B 63 265 133 HOH HOH . F 3 HOH B 64 266 137 HOH HOH . F 3 HOH B 65 267 138 HOH HOH . F 3 HOH B 66 268 142 HOH HOH . F 3 HOH B 67 269 144 HOH HOH . F 3 HOH B 68 270 151 HOH HOH . F 3 HOH B 69 271 152 HOH HOH . F 3 HOH B 70 272 153 HOH HOH . F 3 HOH B 71 273 154 HOH HOH . F 3 HOH B 72 274 155 HOH HOH . F 3 HOH B 73 275 156 HOH HOH . F 3 HOH B 74 276 158 HOH HOH . F 3 HOH B 75 277 160 HOH HOH . F 3 HOH B 76 278 161 HOH HOH . F 3 HOH B 77 279 162 HOH HOH . F 3 HOH B 78 280 163 HOH HOH . F 3 HOH B 79 281 165 HOH HOH . F 3 HOH B 80 282 166 HOH HOH . F 3 HOH B 81 283 167 HOH HOH . F 3 HOH B 82 284 169 HOH HOH . F 3 HOH B 83 285 171 HOH HOH . F 3 HOH B 84 286 172 HOH HOH . F 3 HOH B 85 287 173 HOH HOH . F 3 HOH B 86 288 176 HOH HOH . F 3 HOH B 87 289 177 HOH HOH . F 3 HOH B 88 290 178 HOH HOH . F 3 HOH B 89 291 179 HOH HOH . F 3 HOH B 90 292 180 HOH HOH . F 3 HOH B 91 293 181 HOH HOH . F 3 HOH B 92 294 182 HOH HOH . F 3 HOH B 93 295 184 HOH HOH . F 3 HOH B 94 296 185 HOH HOH . F 3 HOH B 95 297 187 HOH HOH . F 3 HOH B 96 298 188 HOH HOH . F 3 HOH B 97 299 193 HOH HOH . F 3 HOH B 98 300 196 HOH HOH . F 3 HOH B 99 301 197 HOH HOH . F 3 HOH B 100 302 200 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 30.046 _atom_site.Cartn_y 7.901 _atom_site.Cartn_z 77.1 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 39.64 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 17 _model_server_stats.element_count 1 #