data_2A7X # _model_server_result.job_id qzJ6ene7YXr890LH2d8kJQ _model_server_result.datetime_utc '2024-11-08 12:04:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2a7x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":602}' # _entry.id 2A7X # _exptl.entry_id 2A7X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 125.56 _cell.angle_gamma 90 _cell.entry_id 2A7X _cell.length_a 120.262 _cell.length_b 44.944 _cell.length_c 82.236 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2A7X _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -47.824772 0 66.899558 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 155 n n C1 C2 GOL sing 156 n n C1 H11 GOL sing 157 n n C1 H12 GOL sing 158 n n O1 HO1 GOL sing 159 n n C2 O2 GOL sing 160 n n C2 C3 GOL sing 161 n n C2 H2 GOL sing 162 n n O2 HO2 GOL sing 163 n n C3 O3 GOL sing 164 n n C3 H31 GOL sing 165 n n C3 H32 GOL sing 166 n n O3 HO3 GOL sing 167 n n # _atom_sites.entry_id 2A7X _atom_sites.fract_transf_matrix[1][1] 0.008315 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005945 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02225 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014948 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 701 1 SO4 SO4 . C 3 AMP A 1 501 1 AMP AMP . D 4 GOL A 1 601 1 GOL GOL . E 4 GOL A 1 602 2 GOL GOL . F 5 HOH A 1 702 1 HOH HOH . F 5 HOH A 2 703 2 HOH HOH . F 5 HOH A 3 704 3 HOH HOH . F 5 HOH A 4 705 4 HOH HOH . F 5 HOH A 5 706 5 HOH HOH . F 5 HOH A 6 707 6 HOH HOH . F 5 HOH A 7 708 7 HOH HOH . F 5 HOH A 8 709 8 HOH HOH . F 5 HOH A 9 710 9 HOH HOH . F 5 HOH A 10 711 10 HOH HOH . F 5 HOH A 11 712 11 HOH HOH . F 5 HOH A 12 713 12 HOH HOH . F 5 HOH A 13 714 13 HOH HOH . F 5 HOH A 14 715 14 HOH HOH . F 5 HOH A 15 716 15 HOH HOH . F 5 HOH A 16 717 16 HOH HOH . F 5 HOH A 17 718 17 HOH HOH . F 5 HOH A 18 719 18 HOH HOH . F 5 HOH A 19 720 19 HOH HOH . F 5 HOH A 20 721 20 HOH HOH . F 5 HOH A 21 722 21 HOH HOH . F 5 HOH A 22 723 22 HOH HOH . F 5 HOH A 23 724 23 HOH HOH . F 5 HOH A 24 725 24 HOH HOH . F 5 HOH A 25 726 25 HOH HOH . F 5 HOH A 26 727 26 HOH HOH . F 5 HOH A 27 728 27 HOH HOH . F 5 HOH A 28 729 28 HOH HOH . F 5 HOH A 29 730 29 HOH HOH . F 5 HOH A 30 731 30 HOH HOH . F 5 HOH A 31 732 31 HOH HOH . F 5 HOH A 32 733 32 HOH HOH . F 5 HOH A 33 734 33 HOH HOH . F 5 HOH A 34 735 34 HOH HOH . F 5 HOH A 35 736 35 HOH HOH . F 5 HOH A 36 737 36 HOH HOH . F 5 HOH A 37 738 37 HOH HOH . F 5 HOH A 38 739 38 HOH HOH . F 5 HOH A 39 740 39 HOH HOH . F 5 HOH A 40 741 40 HOH HOH . F 5 HOH A 41 742 41 HOH HOH . F 5 HOH A 42 743 42 HOH HOH . F 5 HOH A 43 744 43 HOH HOH . F 5 HOH A 44 745 44 HOH HOH . F 5 HOH A 45 746 45 HOH HOH . F 5 HOH A 46 747 46 HOH HOH . F 5 HOH A 47 748 47 HOH HOH . F 5 HOH A 48 749 48 HOH HOH . F 5 HOH A 49 750 49 HOH HOH . F 5 HOH A 50 751 50 HOH HOH . F 5 HOH A 51 752 51 HOH HOH . F 5 HOH A 52 753 52 HOH HOH . F 5 HOH A 53 754 53 HOH HOH . F 5 HOH A 54 755 54 HOH HOH . F 5 HOH A 55 756 55 HOH HOH . F 5 HOH A 56 757 56 HOH HOH . F 5 HOH A 57 758 57 HOH HOH . F 5 HOH A 58 759 58 HOH HOH . F 5 HOH A 59 760 59 HOH HOH . F 5 HOH A 60 761 60 HOH HOH . F 5 HOH A 61 762 61 HOH HOH . F 5 HOH A 62 763 62 HOH HOH . F 5 HOH A 63 764 63 HOH HOH . F 5 HOH A 64 765 64 HOH HOH . F 5 HOH A 65 766 65 HOH HOH . F 5 HOH A 66 767 66 HOH HOH . F 5 HOH A 67 768 67 HOH HOH . F 5 HOH A 68 769 68 HOH HOH . F 5 HOH A 69 770 69 HOH HOH . F 5 HOH A 70 771 70 HOH HOH . F 5 HOH A 71 772 71 HOH HOH . F 5 HOH A 72 773 72 HOH HOH . F 5 HOH A 73 774 73 HOH HOH . F 5 HOH A 74 775 74 HOH HOH . F 5 HOH A 75 776 75 HOH HOH . F 5 HOH A 76 777 76 HOH HOH . F 5 HOH A 77 778 77 HOH HOH . F 5 HOH A 78 779 78 HOH HOH . F 5 HOH A 79 780 79 HOH HOH . F 5 HOH A 80 781 80 HOH HOH . F 5 HOH A 81 782 81 HOH HOH . F 5 HOH A 82 783 82 HOH HOH . F 5 HOH A 83 784 83 HOH HOH . F 5 HOH A 84 785 84 HOH HOH . F 5 HOH A 85 786 85 HOH HOH . F 5 HOH A 86 787 86 HOH HOH . F 5 HOH A 87 788 87 HOH HOH . F 5 HOH A 88 789 88 HOH HOH . F 5 HOH A 89 790 89 HOH HOH . F 5 HOH A 90 791 90 HOH HOH . F 5 HOH A 91 792 91 HOH HOH . F 5 HOH A 92 793 92 HOH HOH . F 5 HOH A 93 794 93 HOH HOH . F 5 HOH A 94 795 94 HOH HOH . F 5 HOH A 95 796 95 HOH HOH . F 5 HOH A 96 797 96 HOH HOH . F 5 HOH A 97 798 97 HOH HOH . F 5 HOH A 98 799 98 HOH HOH . F 5 HOH A 99 800 99 HOH HOH . F 5 HOH A 100 801 100 HOH HOH . F 5 HOH A 101 802 101 HOH HOH . F 5 HOH A 102 803 102 HOH HOH . F 5 HOH A 103 804 103 HOH HOH . F 5 HOH A 104 805 104 HOH HOH . F 5 HOH A 105 806 105 HOH HOH . F 5 HOH A 106 807 106 HOH HOH . F 5 HOH A 107 808 107 HOH HOH . F 5 HOH A 108 809 108 HOH HOH . F 5 HOH A 109 810 109 HOH HOH . F 5 HOH A 110 811 110 HOH HOH . F 5 HOH A 111 812 111 HOH HOH . F 5 HOH A 112 813 112 HOH HOH . F 5 HOH A 113 814 113 HOH HOH . F 5 HOH A 114 815 114 HOH HOH . F 5 HOH A 115 816 115 HOH HOH . F 5 HOH A 116 817 116 HOH HOH . F 5 HOH A 117 818 117 HOH HOH . F 5 HOH A 118 819 118 HOH HOH . F 5 HOH A 119 820 119 HOH HOH . F 5 HOH A 120 821 120 HOH HOH . F 5 HOH A 121 822 121 HOH HOH . F 5 HOH A 122 823 122 HOH HOH . F 5 HOH A 123 824 123 HOH HOH . F 5 HOH A 124 825 124 HOH HOH . F 5 HOH A 125 826 125 HOH HOH . F 5 HOH A 126 827 126 HOH HOH . F 5 HOH A 127 828 127 HOH HOH . F 5 HOH A 128 829 128 HOH HOH . F 5 HOH A 129 830 129 HOH HOH . F 5 HOH A 130 831 130 HOH HOH . F 5 HOH A 131 832 131 HOH HOH . F 5 HOH A 132 833 132 HOH HOH . F 5 HOH A 133 834 133 HOH HOH . F 5 HOH A 134 835 134 HOH HOH . F 5 HOH A 135 836 135 HOH HOH . F 5 HOH A 136 837 136 HOH HOH . F 5 HOH A 137 838 137 HOH HOH . F 5 HOH A 138 839 138 HOH HOH . F 5 HOH A 139 840 139 HOH HOH . F 5 HOH A 140 841 140 HOH HOH . F 5 HOH A 141 842 141 HOH HOH . F 5 HOH A 142 843 142 HOH HOH . F 5 HOH A 143 844 143 HOH HOH . F 5 HOH A 144 845 144 HOH HOH . F 5 HOH A 145 846 145 HOH HOH . F 5 HOH A 146 847 146 HOH HOH . F 5 HOH A 147 848 147 HOH HOH . F 5 HOH A 148 849 148 HOH HOH . F 5 HOH A 149 850 149 HOH HOH . F 5 HOH A 150 851 150 HOH HOH . F 5 HOH A 151 852 151 HOH HOH . F 5 HOH A 152 853 152 HOH HOH . F 5 HOH A 153 854 153 HOH HOH . F 5 HOH A 154 855 154 HOH HOH . F 5 HOH A 155 856 155 HOH HOH . F 5 HOH A 156 857 156 HOH HOH . F 5 HOH A 157 858 157 HOH HOH . F 5 HOH A 158 859 158 HOH HOH . F 5 HOH A 159 860 159 HOH HOH . F 5 HOH A 160 861 160 HOH HOH . F 5 HOH A 161 862 161 HOH HOH . F 5 HOH A 162 863 162 HOH HOH . F 5 HOH A 163 864 163 HOH HOH . F 5 HOH A 164 865 164 HOH HOH . F 5 HOH A 165 866 165 HOH HOH . F 5 HOH A 166 867 166 HOH HOH . F 5 HOH A 167 868 167 HOH HOH . F 5 HOH A 168 869 168 HOH HOH . F 5 HOH A 169 870 169 HOH HOH . F 5 HOH A 170 871 170 HOH HOH . F 5 HOH A 171 872 171 HOH HOH . F 5 HOH A 172 873 172 HOH HOH . F 5 HOH A 173 874 173 HOH HOH . F 5 HOH A 174 875 174 HOH HOH . F 5 HOH A 175 876 175 HOH HOH . F 5 HOH A 176 877 176 HOH HOH . F 5 HOH A 177 878 177 HOH HOH . F 5 HOH A 178 879 178 HOH HOH . F 5 HOH A 179 880 179 HOH HOH . F 5 HOH A 180 881 180 HOH HOH . F 5 HOH A 181 882 181 HOH HOH . F 5 HOH A 182 883 182 HOH HOH . F 5 HOH A 183 884 183 HOH HOH . F 5 HOH A 184 885 184 HOH HOH . F 5 HOH A 185 886 185 HOH HOH . F 5 HOH A 186 887 186 HOH HOH . F 5 HOH A 187 888 187 HOH HOH . F 5 HOH A 188 889 188 HOH HOH . F 5 HOH A 189 890 189 HOH HOH . F 5 HOH A 190 891 190 HOH HOH . F 5 HOH A 191 892 191 HOH HOH . F 5 HOH A 192 893 192 HOH HOH . F 5 HOH A 193 894 193 HOH HOH . F 5 HOH A 194 895 194 HOH HOH . F 5 HOH A 195 896 195 HOH HOH . F 5 HOH A 196 897 196 HOH HOH . F 5 HOH A 197 898 197 HOH HOH . F 5 HOH A 198 899 198 HOH HOH . F 5 HOH A 199 900 199 HOH HOH . F 5 HOH A 200 901 200 HOH HOH . F 5 HOH A 201 902 201 HOH HOH . F 5 HOH A 202 903 202 HOH HOH . F 5 HOH A 203 904 203 HOH HOH . F 5 HOH A 204 905 204 HOH HOH . F 5 HOH A 205 906 205 HOH HOH . F 5 HOH A 206 907 206 HOH HOH . F 5 HOH A 207 908 207 HOH HOH . F 5 HOH A 208 909 208 HOH HOH . F 5 HOH A 209 910 209 HOH HOH . F 5 HOH A 210 911 210 HOH HOH . F 5 HOH A 211 912 211 HOH HOH . F 5 HOH A 212 913 212 HOH HOH . F 5 HOH A 213 914 213 HOH HOH . F 5 HOH A 214 915 214 HOH HOH . F 5 HOH A 215 916 215 HOH HOH . F 5 HOH A 216 917 216 HOH HOH . F 5 HOH A 217 918 217 HOH HOH . F 5 HOH A 218 919 218 HOH HOH . F 5 HOH A 219 920 219 HOH HOH . F 5 HOH A 220 921 220 HOH HOH . F 5 HOH A 221 922 221 HOH HOH . F 5 HOH A 222 923 222 HOH HOH . F 5 HOH A 223 924 223 HOH HOH . F 5 HOH A 224 925 224 HOH HOH . F 5 HOH A 225 926 225 HOH HOH . F 5 HOH A 226 927 226 HOH HOH . F 5 HOH A 227 928 227 HOH HOH . F 5 HOH A 228 929 228 HOH HOH . F 5 HOH A 229 930 229 HOH HOH . F 5 HOH A 230 931 230 HOH HOH . F 5 HOH A 231 932 231 HOH HOH . F 5 HOH A 232 933 232 HOH HOH . F 5 HOH A 233 934 233 HOH HOH . F 5 HOH A 234 935 234 HOH HOH . F 5 HOH A 235 936 235 HOH HOH . F 5 HOH A 236 937 236 HOH HOH . F 5 HOH A 237 938 237 HOH HOH . F 5 HOH A 238 939 238 HOH HOH . F 5 HOH A 239 940 239 HOH HOH . F 5 HOH A 240 941 240 HOH HOH . F 5 HOH A 241 942 241 HOH HOH . F 5 HOH A 242 943 242 HOH HOH . F 5 HOH A 243 944 243 HOH HOH . F 5 HOH A 244 945 244 HOH HOH . F 5 HOH A 245 946 245 HOH HOH . F 5 HOH A 246 947 246 HOH HOH . F 5 HOH A 247 948 247 HOH HOH . F 5 HOH A 248 949 248 HOH HOH . F 5 HOH A 249 950 249 HOH HOH . F 5 HOH A 250 951 250 HOH HOH . F 5 HOH A 251 952 251 HOH HOH . F 5 HOH A 252 953 252 HOH HOH . F 5 HOH A 253 954 253 HOH HOH . F 5 HOH A 254 955 254 HOH HOH . F 5 HOH A 255 956 255 HOH HOH . F 5 HOH A 256 957 256 HOH HOH . F 5 HOH A 257 958 257 HOH HOH . F 5 HOH A 258 959 258 HOH HOH . F 5 HOH A 259 960 259 HOH HOH . F 5 HOH A 260 961 260 HOH HOH . F 5 HOH A 261 962 261 HOH HOH . F 5 HOH A 262 963 262 HOH HOH . F 5 HOH A 263 964 263 HOH HOH . F 5 HOH A 264 965 264 HOH HOH . F 5 HOH A 265 966 265 HOH HOH . F 5 HOH A 266 967 266 HOH HOH . F 5 HOH A 267 968 267 HOH HOH . F 5 HOH A 268 969 268 HOH HOH . F 5 HOH A 269 970 269 HOH HOH . F 5 HOH A 270 971 270 HOH HOH . F 5 HOH A 271 972 271 HOH HOH . F 5 HOH A 272 973 272 HOH HOH . F 5 HOH A 273 974 273 HOH HOH . F 5 HOH A 274 975 274 HOH HOH . F 5 HOH A 275 976 275 HOH HOH . F 5 HOH A 276 977 276 HOH HOH . F 5 HOH A 277 978 277 HOH HOH . F 5 HOH A 278 979 278 HOH HOH . F 5 HOH A 279 980 279 HOH HOH . F 5 HOH A 280 981 280 HOH HOH . F 5 HOH A 281 982 281 HOH HOH . F 5 HOH A 282 983 282 HOH HOH . F 5 HOH A 283 984 283 HOH HOH . F 5 HOH A 284 985 284 HOH HOH . F 5 HOH A 285 986 285 HOH HOH . F 5 HOH A 286 987 286 HOH HOH . F 5 HOH A 287 988 287 HOH HOH . F 5 HOH A 288 989 288 HOH HOH . F 5 HOH A 289 990 289 HOH HOH . F 5 HOH A 290 991 290 HOH HOH . F 5 HOH A 291 992 291 HOH HOH . F 5 HOH A 292 993 292 HOH HOH . F 5 HOH A 293 994 293 HOH HOH . F 5 HOH A 294 995 294 HOH HOH . F 5 HOH A 295 996 295 HOH HOH . F 5 HOH A 296 997 296 HOH HOH . F 5 HOH A 297 998 297 HOH HOH . F 5 HOH A 298 999 298 HOH HOH . F 5 HOH A 299 1000 299 HOH HOH . F 5 HOH A 300 1001 300 HOH HOH . F 5 HOH A 301 1002 301 HOH HOH . F 5 HOH A 302 1003 302 HOH HOH . F 5 HOH A 303 1004 303 HOH HOH . F 5 HOH A 304 1005 304 HOH HOH . F 5 HOH A 305 1006 305 HOH HOH . F 5 HOH A 306 1007 306 HOH HOH . F 5 HOH A 307 1008 307 HOH HOH . F 5 HOH A 308 1009 308 HOH HOH . F 5 HOH A 309 1010 309 HOH HOH . F 5 HOH A 310 1011 310 HOH HOH . F 5 HOH A 311 1012 311 HOH HOH . F 5 HOH A 312 1013 312 HOH HOH . F 5 HOH A 313 1014 313 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 4 -21.869 8.496 30.497 1 55.19 ? C1 GOL 602 A 1 HETATM 2 O O1 GOL . . . E 4 -22.462 7.657 31.469 1 36.28 ? O1 GOL 602 A 1 HETATM 3 C C2 GOL . . . E 4 -20.627 9.001 31.199 1 41.31 ? C2 GOL 602 A 1 HETATM 4 O O2 GOL . . . E 4 -21.035 9.601 32.426 1 46.87 ? O2 GOL 602 A 1 HETATM 5 C C3 GOL . . . E 4 -19.761 9.874 30.288 1 43.47 ? C3 GOL 602 A 1 HETATM 6 O O3 GOL . . . E 4 -20.342 11.14 30.138 1 38.45 ? O3 GOL 602 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 6 #