data_2A81 # _model_server_result.job_id 3iJKjwfvW_YNF4rJtQIkXQ _model_server_result.datetime_utc '2025-06-20 16:12:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2a81 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 2A81 # _exptl.entry_id 2A81 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 163.172 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BICINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2A81 _cell.length_a 139.605 _cell.length_b 139.605 _cell.length_c 78.546 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2A81 _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H13 N O4' _chem_comp.formula_weight 163.172 _chem_comp.id BCN _chem_comp.mon_nstd_flag . _chem_comp.name BICINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C1 BCN sing 161 n n N1 C3 BCN sing 162 n n N1 C5 BCN sing 163 n n C1 C2 BCN sing 164 n n C1 H11 BCN sing 165 n n C1 H12 BCN sing 166 n n C2 O21 BCN doub 167 n n C2 O22 BCN sing 168 n n O22 HO2 BCN sing 169 n n C3 C4 BCN sing 170 n n C3 H31 BCN sing 171 n n C3 H32 BCN sing 172 n n C4 O4 BCN sing 173 n n C4 H41 BCN sing 174 n n C4 H42 BCN sing 175 n n O4 HO4 BCN sing 176 n n C5 C6 BCN sing 177 n n C5 H51 BCN sing 178 n n C5 H52 BCN sing 179 n n C6 O6 BCN sing 180 n n C6 H61 BCN sing 181 n n C6 H62 BCN sing 182 n n O6 HO6 BCN sing 183 n n # _atom_sites.entry_id 2A81 _atom_sites.fract_transf_matrix[1][1] 0.00716 _atom_sites.fract_transf_matrix[1][2] 0.00414 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00827 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01273 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 ACO A 1 500 500 ACO ACO . E 3 BCN A 1 501 501 BCN BCN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 BCN . . . E 3 11.595 -59.587 1.004 1 39.07 ? N1 BCN 501 A 1 HETATM 2 C C1 BCN . . . E 3 12.659 -59.682 2.037 1 38.76 ? C1 BCN 501 A 1 HETATM 3 C C2 BCN . . . E 3 14.105 -59.525 1.5 1 37.9 ? C2 BCN 501 A 1 HETATM 4 O O21 BCN . . . E 3 14.845 -60.538 1.554 1 37.17 ? O21 BCN 501 A 1 HETATM 5 O O22 BCN . . . E 3 14.447 -58.393 1.075 1 37.06 ? O22 BCN 501 A 1 HETATM 6 C C3 BCN . . . E 3 11.829 -60.582 -0.054 1 39.31 ? C3 BCN 501 A 1 HETATM 7 C C4 BCN . . . E 3 11.702 -59.858 -1.388 1 39.87 ? C4 BCN 501 A 1 HETATM 8 O O4 BCN . . . E 3 13.005 -59.534 -1.899 1 40.37 ? O4 BCN 501 A 1 HETATM 9 C C5 BCN . . . E 3 10.238 -59.834 1.565 1 38.37 ? C5 BCN 501 A 1 HETATM 10 C C6 BCN . . . E 3 9.645 -58.585 2.24 1 37.67 ? C6 BCN 501 A 1 HETATM 11 O O6 BCN . . . E 3 8.536 -58.068 1.489 1 37.45 ? O6 BCN 501 A 1 # _model_server_stats.io_time_ms 89 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 62 _model_server_stats.query_time_ms 1264 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 11 #