data_2A85 # _model_server_result.job_id 6p0mKCqXzr-Z30VUDlySGw _model_server_result.datetime_utc '2024-11-25 08:53:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2a85 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":390}' # _entry.id 2A85 # _exptl.entry_id 2A85 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2A85 _cell.length_a 98.8 _cell.length_b 98.8 _cell.length_c 87.4 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2A85 _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_775 -x+2,-y+2,z -1 0 0 0 -1 0 0 0 1 197.6 197.6 0 3 'crystal symmetry operation' 3_755 -y+2,x,z 0 -1 0 1 0 0 0 0 1 197.6 0 0 4 'crystal symmetry operation' 4_575 y,-x+2,z 0 1 0 -1 0 0 0 0 1 0 197.6 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 83 n n N1 C10 FMN doub 84 n n C2 O2 FMN doub 85 n n C2 N3 FMN sing 86 n n N3 C4 FMN sing 87 n n N3 HN3 FMN sing 88 n n C4 O4 FMN doub 89 n n C4 C4A FMN sing 90 n n C4A N5 FMN doub 91 n n C4A C10 FMN sing 92 n n N5 C5A FMN sing 93 n n C5A C6 FMN doub 94 n y C5A C9A FMN sing 95 n y C6 C7 FMN sing 96 n y C6 H6 FMN sing 97 n n C7 C7M FMN sing 98 n n C7 C8 FMN doub 99 n y C7M HM71 FMN sing 100 n n C7M HM72 FMN sing 101 n n C7M HM73 FMN sing 102 n n C8 C8M FMN sing 103 n n C8 C9 FMN sing 104 n y C8M HM81 FMN sing 105 n n C8M HM82 FMN sing 106 n n C8M HM83 FMN sing 107 n n C9 C9A FMN doub 108 n y C9 H9 FMN sing 109 n n C9A N10 FMN sing 110 n n N10 C10 FMN sing 111 n n N10 C1' FMN sing 112 n n C1' C2' FMN sing 113 n n C1' "H1'1" FMN sing 114 n n C1' "H1'2" FMN sing 115 n n C2' O2' FMN sing 116 n n C2' C3' FMN sing 117 n n C2' H2' FMN sing 118 n n O2' HO2' FMN sing 119 n n C3' O3' FMN sing 120 n n C3' C4' FMN sing 121 n n C3' H3' FMN sing 122 n n O3' HO3' FMN sing 123 n n C4' O4' FMN sing 124 n n C4' C5' FMN sing 125 n n C4' H4' FMN sing 126 n n O4' HO4' FMN sing 127 n n C5' O5' FMN sing 128 n n C5' "H5'1" FMN sing 129 n n C5' "H5'2" FMN sing 130 n n O5' P FMN sing 131 n n P O1P FMN doub 132 n n P O2P FMN sing 133 n n P O3P FMN sing 134 n n O2P HOP2 FMN sing 135 n n O3P HOP3 FMN sing 136 n n # _atom_sites.entry_id 2A85 _atom_sites.fract_transf_matrix[1][1] 0.010121 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010121 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011442 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 390 390 FMN FMN . C 3 MES A 1 890 890 MES MES . D 4 HOC A 1 462 462 HOC AHA . E 5 HOH A 1 891 1 HOH WAT . E 5 HOH A 2 892 2 HOH WAT . E 5 HOH A 3 893 3 HOH WAT . E 5 HOH A 4 894 4 HOH WAT . E 5 HOH A 5 895 5 HOH WAT . E 5 HOH A 6 896 6 HOH WAT . E 5 HOH A 7 897 7 HOH WAT . E 5 HOH A 8 898 8 HOH WAT . E 5 HOH A 9 899 9 HOH WAT . E 5 HOH A 10 900 10 HOH WAT . E 5 HOH A 11 901 11 HOH WAT . E 5 HOH A 12 902 12 HOH WAT . E 5 HOH A 13 903 13 HOH WAT . E 5 HOH A 14 904 14 HOH WAT . E 5 HOH A 15 905 15 HOH WAT . E 5 HOH A 16 906 16 HOH WAT . E 5 HOH A 17 907 17 HOH WAT . E 5 HOH A 18 908 18 HOH WAT . E 5 HOH A 19 909 19 HOH WAT . E 5 HOH A 20 910 20 HOH WAT . E 5 HOH A 21 911 21 HOH WAT . E 5 HOH A 22 912 22 HOH WAT . E 5 HOH A 23 913 23 HOH WAT . E 5 HOH A 24 914 24 HOH WAT . E 5 HOH A 25 915 25 HOH WAT . E 5 HOH A 26 916 26 HOH WAT . E 5 HOH A 27 917 27 HOH WAT . E 5 HOH A 28 918 28 HOH WAT . E 5 HOH A 29 919 29 HOH WAT . E 5 HOH A 30 920 30 HOH WAT . E 5 HOH A 31 921 31 HOH WAT . E 5 HOH A 32 922 32 HOH WAT . E 5 HOH A 33 923 33 HOH WAT . E 5 HOH A 34 924 34 HOH WAT . E 5 HOH A 35 925 35 HOH WAT . E 5 HOH A 36 926 36 HOH WAT . E 5 HOH A 37 927 37 HOH WAT . E 5 HOH A 38 928 38 HOH WAT . E 5 HOH A 39 929 39 HOH WAT . E 5 HOH A 40 930 40 HOH WAT . E 5 HOH A 41 931 41 HOH WAT . E 5 HOH A 42 932 42 HOH WAT . E 5 HOH A 43 933 43 HOH WAT . E 5 HOH A 44 934 44 HOH WAT . E 5 HOH A 45 935 45 HOH WAT . E 5 HOH A 46 936 46 HOH WAT . E 5 HOH A 47 937 47 HOH WAT . E 5 HOH A 48 938 48 HOH WAT . E 5 HOH A 49 939 49 HOH WAT . E 5 HOH A 50 940 50 HOH WAT . E 5 HOH A 51 941 51 HOH WAT . E 5 HOH A 52 942 52 HOH WAT . E 5 HOH A 53 943 53 HOH WAT . E 5 HOH A 54 944 54 HOH WAT . E 5 HOH A 55 945 55 HOH WAT . E 5 HOH A 56 946 56 HOH WAT . E 5 HOH A 57 947 57 HOH WAT . E 5 HOH A 58 948 58 HOH WAT . E 5 HOH A 59 949 59 HOH WAT . E 5 HOH A 60 950 60 HOH WAT . E 5 HOH A 61 951 61 HOH WAT . E 5 HOH A 62 952 62 HOH WAT . E 5 HOH A 63 953 63 HOH WAT . E 5 HOH A 64 954 64 HOH WAT . E 5 HOH A 65 955 65 HOH WAT . E 5 HOH A 66 956 66 HOH WAT . E 5 HOH A 67 957 67 HOH WAT . E 5 HOH A 68 958 68 HOH WAT . E 5 HOH A 69 959 69 HOH WAT . E 5 HOH A 70 960 70 HOH WAT . E 5 HOH A 71 961 71 HOH WAT . E 5 HOH A 72 962 72 HOH WAT . E 5 HOH A 73 963 73 HOH WAT . E 5 HOH A 74 964 74 HOH WAT . E 5 HOH A 75 965 75 HOH WAT . E 5 HOH A 76 966 76 HOH WAT . E 5 HOH A 77 967 77 HOH WAT . E 5 HOH A 78 968 78 HOH WAT . E 5 HOH A 79 969 79 HOH WAT . E 5 HOH A 80 970 80 HOH WAT . E 5 HOH A 81 971 81 HOH WAT . E 5 HOH A 82 972 82 HOH WAT . E 5 HOH A 83 973 83 HOH WAT . E 5 HOH A 84 974 84 HOH WAT . E 5 HOH A 85 975 85 HOH WAT . E 5 HOH A 86 976 86 HOH WAT . E 5 HOH A 87 977 87 HOH WAT . E 5 HOH A 88 978 88 HOH WAT . E 5 HOH A 89 979 89 HOH WAT . E 5 HOH A 90 980 90 HOH WAT . E 5 HOH A 91 981 91 HOH WAT . E 5 HOH A 92 982 92 HOH WAT . E 5 HOH A 93 983 93 HOH WAT . E 5 HOH A 94 984 94 HOH WAT . E 5 HOH A 95 985 95 HOH WAT . E 5 HOH A 96 986 96 HOH WAT . E 5 HOH A 97 987 97 HOH WAT . E 5 HOH A 98 988 98 HOH WAT . E 5 HOH A 99 989 99 HOH WAT . E 5 HOH A 100 990 100 HOH WAT . E 5 HOH A 101 991 101 HOH WAT . E 5 HOH A 102 992 102 HOH WAT . E 5 HOH A 103 993 103 HOH WAT . E 5 HOH A 104 994 104 HOH WAT . E 5 HOH A 105 995 105 HOH WAT . E 5 HOH A 106 996 106 HOH WAT . E 5 HOH A 107 997 107 HOH WAT . E 5 HOH A 108 998 108 HOH WAT . E 5 HOH A 109 999 109 HOH WAT . E 5 HOH A 110 1000 110 HOH WAT . E 5 HOH A 111 1001 111 HOH WAT . E 5 HOH A 112 1002 112 HOH WAT . E 5 HOH A 113 1003 113 HOH WAT . E 5 HOH A 114 1004 114 HOH WAT . E 5 HOH A 115 1005 115 HOH WAT . E 5 HOH A 116 1006 116 HOH WAT . E 5 HOH A 117 1007 117 HOH WAT . E 5 HOH A 118 1008 118 HOH WAT . E 5 HOH A 119 1009 119 HOH WAT . E 5 HOH A 120 1010 120 HOH WAT . E 5 HOH A 121 1011 121 HOH WAT . E 5 HOH A 122 1012 122 HOH WAT . E 5 HOH A 123 1013 123 HOH WAT . E 5 HOH A 124 1014 124 HOH WAT . E 5 HOH A 125 1015 125 HOH WAT . E 5 HOH A 126 1016 126 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . B 2 71.956 82.079 26.131 1 31.12 ? N1 FMN 390 A 1 HETATM 2 C C2 FMN . . . B 2 70.769 81.567 26.621 1 32.66 ? C2 FMN 390 A 1 HETATM 3 O O2 FMN . . . B 2 70.587 81.394 27.763 1 34.03 ? O2 FMN 390 A 1 HETATM 4 N N3 FMN . . . B 2 69.735 81.218 25.643 1 31.54 ? N3 FMN 390 A 1 HETATM 5 C C4 FMN . . . B 2 69.833 81.388 24.224 1 30.09 ? C4 FMN 390 A 1 HETATM 6 O O4 FMN . . . B 2 68.944 81.081 23.435 1 31.41 ? O4 FMN 390 A 1 HETATM 7 C C4A FMN . . . B 2 71.13 81.944 23.721 1 30.41 ? C4A FMN 390 A 1 HETATM 8 N N5 FMN . . . B 2 71.37 82.121 22.398 1 30.57 ? N5 FMN 390 A 1 HETATM 9 C C5A FMN . . . B 2 72.624 82.526 21.916 1 30.06 ? C5A FMN 390 A 1 HETATM 10 C C6 FMN . . . B 2 72.874 82.6 20.484 1 29.65 ? C6 FMN 390 A 1 HETATM 11 C C7 FMN . . . B 2 74.196 82.9 19.916 1 26.88 ? C7 FMN 390 A 1 HETATM 12 C C7M FMN . . . B 2 74.35 82.928 18.429 1 31.23 ? C7M FMN 390 A 1 HETATM 13 C C8 FMN . . . B 2 75.37 83.162 20.876 1 27.57 ? C8 FMN 390 A 1 HETATM 14 C C8M FMN . . . B 2 76.787 83.451 20.44 1 30.21 ? C8M FMN 390 A 1 HETATM 15 C C9 FMN . . . B 2 75.102 83.119 22.278 1 29.05 ? C9 FMN 390 A 1 HETATM 16 C C9A FMN . . . B 2 73.776 82.804 22.878 1 28.53 ? C9A FMN 390 A 1 HETATM 17 N N10 FMN . . . B 2 73.441 82.666 24.315 1 28.64 ? N10 FMN 390 A 1 HETATM 18 C C10 FMN . . . B 2 72.157 82.252 24.814 1 29.27 ? C10 FMN 390 A 1 HETATM 19 C C1' FMN . . . B 2 74.541 82.852 25.288 1 27.01 ? C1' FMN 390 A 1 HETATM 20 C C2' FMN . . . B 2 75.32 81.544 25.47 1 26.09 ? C2' FMN 390 A 1 HETATM 21 O O2' FMN . . . B 2 74.605 80.596 26.159 1 27.17 ? O2' FMN 390 A 1 HETATM 22 C C3' FMN . . . B 2 76.665 81.712 26.172 1 28.15 ? C3' FMN 390 A 1 HETATM 23 O O3' FMN . . . B 2 76.463 82.434 27.455 1 27.8 ? O3' FMN 390 A 1 HETATM 24 C C4' FMN . . . B 2 77.707 82.539 25.431 1 25.99 ? C4' FMN 390 A 1 HETATM 25 O O4' FMN . . . B 2 77.803 82.198 24.071 1 26.06 ? O4' FMN 390 A 1 HETATM 26 C C5' FMN . . . B 2 79.053 82.322 26.071 1 25.34 ? C5' FMN 390 A 1 HETATM 27 O O5' FMN . . . B 2 80.137 82.983 25.338 1 25.77 ? O5' FMN 390 A 1 HETATM 28 P P FMN . . . B 2 81.062 82.468 24.214 1 27.84 ? P FMN 390 A 1 HETATM 29 O O1P FMN . . . B 2 82.274 83.361 24.083 1 28.07 ? O1P FMN 390 A 1 HETATM 30 O O2P FMN . . . B 2 80.226 82.417 22.983 1 25.67 ? O2P FMN 390 A 1 HETATM 31 O O3P FMN . . . B 2 81.422 81.078 24.686 1 25.98 ? O3P FMN 390 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 31 #