data_2A8T
#
_model_server_result.job_id            n5bbrO7nFI3S87oDdIjWfw 
_model_server_result.datetime_utc      '2025-02-26 23:21:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2a8t 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":304}' 
#
_entry.id    2A8T 
#
_exptl.entry_id    2A8T 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2A8T 
_cell.length_a            50.702 
_cell.length_b            81.71 
_cell.length_c            111.706 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2A8T 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 G PG MGT . A MGT 251 1_555 H O5' ADN . A ADN 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.624 ? 
covale ? covale2 L PG MGT . B MGT 251 1_555 M O5' ADN . B ADN 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.616 ? 
metalc ? metalc1 A O GLY 72 A GLY 72 1_555 C MN MN . A MN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
metalc ? metalc2 A OE2 GLU 89 A GLU 89 1_555 D MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? 
metalc ? metalc3 A OE1 GLU 89 A GLU 89 1_555 E MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? 
metalc ? metalc4 A OE2 GLU 93 A GLU 93 1_555 C MN MN . A MN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? 
metalc ? metalc5 A OE2 GLU 93 A GLU 93 1_555 D MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? 
metalc ? metalc6 A OE1 GLU 150 A GLU 150 1_555 D MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? 
metalc ? metalc7 A OE2 GLU 150 A GLU 150 1_555 F MN MN . A MN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
metalc ? metalc8 G O3G MGT . A MGT 251 1_555 C MN MN . A MN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
metalc ? metalc9 G O2B MGT . A MGT 251 1_555 C MN MN . A MN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? 
metalc ? metalc10 G O2B MGT . A MGT 251 1_555 D MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? 
metalc ? metalc11 G O1B MGT . A MGT 251 1_555 E MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? 
metalc ? metalc12 G O3A MGT . A MGT 251 1_555 F MN MN . A MN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? 
metalc ? metalc13 C MN MN . A MN 300 1_555 N O HOH . A HOH 633 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? 
metalc ? metalc14 D MN MN . A MN 301 1_555 N O HOH . A HOH 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? 
metalc ? metalc15 B O GLY 72 B GLY 72 1_555 I MN MN . B MN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? 
metalc ? metalc16 B OE2 GLU 89 B GLU 89 1_555 J MN MN . B MN 305 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.455 ? 
metalc ? metalc17 B OE2 GLU 89 B GLU 89 1_555 J MN MN . B MN 305 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.009 ? 
metalc ? metalc18 B OE2 GLU 93 B GLU 93 1_555 I MN MN . B MN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
metalc ? metalc19 B OE2 GLU 93 B GLU 93 1_555 J MN MN . B MN 305 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.104 ? 
metalc ? metalc20 B OD2 ASP 146 B ASP 146 1_555 J MN MN . B MN 305 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.5 ? 
metalc ? metalc21 B OE1 GLU 150 B GLU 150 1_555 J MN MN . B MN 305 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.396 ? 
metalc ? metalc22 B OE2 GLU 150 B GLU 150 1_555 K MN MN . B MN 306 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.274 ? 
metalc ? metalc23 L O2B MGT . B MGT 251 1_555 I MN MN . B MN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? 
metalc ? metalc24 L O3G MGT . B MGT 251 1_555 I MN MN . B MN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? 
metalc ? metalc25 L O2B MGT . B MGT 251 1_555 J MN MN . B MN 305 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.218 ? 
metalc ? metalc26 L O3A MGT . B MGT 251 1_555 K MN MN . B MN 306 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.285 ? 
metalc ? metalc27 L O1B MGT . B MGT 251 1_555 K MN MN . B MN 306 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.309 ? 
metalc ? metalc28 I MN MN . B MN 304 1_555 O O HOH . B HOH 635 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.957 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2A8T 
_atom_sites.fract_transf_matrix[1][1]    0.019723 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012238 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008952 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MN A 1 300 300 MN MN . 
D 2 MN A 1 301 301 MN MN . 
E 2 MN A 1 302 302 MN MN . 
F 2 MN A 1 303 303 MN MN . 
G 3 MGT A 1 251 251 MGT MGT . 
H 4 ADN A 1 252 252 ADN ADN . 
I 2 MN B 1 304 304 MN MN . 
J 2 MN B 1 305 305 MN MN . 
K 2 MN B 1 306 306 MN MN . 
L 3 MGT B 1 251 251 MGT MGT . 
M 4 ADN B 1 252 252 ADN ADN . 
N 5 HOH A 1 502 502 HOH HOH . 
N 5 HOH A 2 505 505 HOH HOH . 
N 5 HOH A 3 506 506 HOH HOH . 
N 5 HOH A 4 507 507 HOH HOH . 
N 5 HOH A 5 510 510 HOH HOH . 
N 5 HOH A 6 511 511 HOH HOH . 
N 5 HOH A 7 517 517 HOH HOH . 
N 5 HOH A 8 521 521 HOH HOH . 
N 5 HOH A 9 523 523 HOH HOH . 
N 5 HOH A 10 533 533 HOH HOH . 
N 5 HOH A 11 535 535 HOH HOH . 
N 5 HOH A 12 538 538 HOH HOH . 
N 5 HOH A 13 543 543 HOH HOH . 
N 5 HOH A 14 551 551 HOH HOH . 
N 5 HOH A 15 553 553 HOH HOH . 
N 5 HOH A 16 556 556 HOH HOH . 
N 5 HOH A 17 562 562 HOH HOH . 
N 5 HOH A 18 581 581 HOH HOH . 
N 5 HOH A 19 601 601 HOH HOH . 
N 5 HOH A 20 604 604 HOH HOH . 
N 5 HOH A 21 620 620 HOH HOH . 
N 5 HOH A 22 626 626 HOH HOH . 
N 5 HOH A 23 627 627 HOH HOH . 
N 5 HOH A 24 633 633 HOH HOH . 
N 5 HOH A 25 637 637 HOH HOH . 
N 5 HOH A 26 638 638 HOH HOH . 
N 5 HOH A 27 639 639 HOH HOH . 
N 5 HOH A 28 640 640 HOH HOH . 
N 5 HOH A 29 641 641 HOH HOH . 
N 5 HOH A 30 642 642 HOH HOH . 
O 5 HOH B 1 500 500 HOH HOH . 
O 5 HOH B 2 501 501 HOH HOH . 
O 5 HOH B 3 503 503 HOH HOH . 
O 5 HOH B 4 508 508 HOH HOH . 
O 5 HOH B 5 509 509 HOH HOH . 
O 5 HOH B 6 512 512 HOH HOH . 
O 5 HOH B 7 513 513 HOH HOH . 
O 5 HOH B 8 514 514 HOH HOH . 
O 5 HOH B 9 515 515 HOH HOH . 
O 5 HOH B 10 516 516 HOH HOH . 
O 5 HOH B 11 518 518 HOH HOH . 
O 5 HOH B 12 519 519 HOH HOH . 
O 5 HOH B 13 522 522 HOH HOH . 
O 5 HOH B 14 524 524 HOH HOH . 
O 5 HOH B 15 525 525 HOH HOH . 
O 5 HOH B 16 526 526 HOH HOH . 
O 5 HOH B 17 527 527 HOH HOH . 
O 5 HOH B 18 528 528 HOH HOH . 
O 5 HOH B 19 529 529 HOH HOH . 
O 5 HOH B 20 531 531 HOH HOH . 
O 5 HOH B 21 532 532 HOH HOH . 
O 5 HOH B 22 536 536 HOH HOH . 
O 5 HOH B 23 539 539 HOH HOH . 
O 5 HOH B 24 540 540 HOH HOH . 
O 5 HOH B 25 541 541 HOH HOH . 
O 5 HOH B 26 545 545 HOH HOH . 
O 5 HOH B 27 546 546 HOH HOH . 
O 5 HOH B 28 547 547 HOH HOH . 
O 5 HOH B 29 549 549 HOH HOH . 
O 5 HOH B 30 550 550 HOH HOH . 
O 5 HOH B 31 552 552 HOH HOH . 
O 5 HOH B 32 554 554 HOH HOH . 
O 5 HOH B 33 555 555 HOH HOH . 
O 5 HOH B 34 558 558 HOH HOH . 
O 5 HOH B 35 563 563 HOH HOH . 
O 5 HOH B 36 564 564 HOH HOH . 
O 5 HOH B 37 568 568 HOH HOH . 
O 5 HOH B 38 574 574 HOH HOH . 
O 5 HOH B 39 576 576 HOH HOH . 
O 5 HOH B 40 583 583 HOH HOH . 
O 5 HOH B 41 589 589 HOH HOH . 
O 5 HOH B 42 594 594 HOH HOH . 
O 5 HOH B 43 602 602 HOH HOH . 
O 5 HOH B 44 606 606 HOH HOH . 
O 5 HOH B 45 607 607 HOH HOH . 
O 5 HOH B 46 609 609 HOH HOH . 
O 5 HOH B 47 615 615 HOH HOH . 
O 5 HOH B 48 618 618 HOH HOH . 
O 5 HOH B 49 619 619 HOH HOH . 
O 5 HOH B 50 623 623 HOH HOH . 
O 5 HOH B 51 628 628 HOH HOH . 
O 5 HOH B 52 629 629 HOH HOH . 
O 5 HOH B 53 630 630 HOH HOH . 
O 5 HOH B 54 631 631 HOH HOH . 
O 5 HOH B 55 632 632 HOH HOH . 
O 5 HOH B 56 635 635 HOH HOH . 
O 5 HOH B 57 636 636 HOH HOH . 
O 5 HOH B 58 643 643 HOH HOH . 
O 5 HOH B 59 644 644 HOH HOH . 
O 5 HOH B 60 645 645 HOH HOH . 
O 5 HOH B 61 646 646 HOH HOH . 
O 5 HOH B 62 647 647 HOH HOH . 
O 5 HOH B 63 648 648 HOH HOH . 
O 5 HOH B 64 649 649 HOH HOH . 
O 5 HOH B 65 650 650 HOH HOH . 
O 5 HOH B 66 651 651 HOH HOH . 
O 5 HOH B 67 652 652 HOH HOH . 
O 5 HOH B 68 653 653 HOH HOH . 
O 5 HOH B 69 654 654 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         I 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               25.521 
_atom_site.Cartn_y               24.365 
_atom_site.Cartn_z               -12.29 
_atom_site.occupancy             0.8 
_atom_site.B_iso_or_equiv        64.07 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           304 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              46 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           476 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           1 
#