data_2A8U
#
_model_server_result.job_id            Hy03Dux8FnrYlZBB8fARag 
_model_server_result.datetime_utc      '2024-11-02 14:30:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2a8u 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":405}' 
#
_entry.id    2A8U 
#
_exptl.entry_id    2A8U 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              200.59 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MERCURY (II) ION' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2A8U 
_cell.length_a            52.48 
_cell.length_b            150.69 
_cell.length_c            79.25 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2A8U 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA,PQS dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K 1 1 
A,B,C,D,E,F,G,H,I,J,K 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 52.48 0 39.625 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 H N N 
#
_pdbx_entity_branch.entity_id    2 
_pdbx_entity_branch.type         oligosaccharide 
#
_pdbx_entity_branch_link.link_id                     1 
_pdbx_entity_branch_link.details                     ? 
_pdbx_entity_branch_link.entity_id                   2 
_pdbx_entity_branch_link.entity_branch_list_num_1    2 
_pdbx_entity_branch_link.entity_branch_list_num_2    1 
_pdbx_entity_branch_link.comp_id_1                   GAL 
_pdbx_entity_branch_link.comp_id_2                   MGL 
_pdbx_entity_branch_link.atom_id_1                   C1 
_pdbx_entity_branch_link.leaving_atom_id_1           O1 
_pdbx_entity_branch_link.atom_stereo_config_1        . 
_pdbx_entity_branch_link.atom_id_2                   O4 
_pdbx_entity_branch_link.leaving_atom_id_2           HO4 
_pdbx_entity_branch_link.atom_stereo_config_2        . 
_pdbx_entity_branch_link.value_order                 sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
2 n B MGL 1 B 1 MGL ? 2 DRG 
2 n B GAL 2 B 2 GAL ? 2 DRG 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B O4 MGL . B MGL 1 1_555 B C1 GAL . B GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 sing 
metalc ? metalc1 C O1A UDP . A UDP 1 1_555 J MN MN . A MN 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? 
metalc ? metalc2 C O1B UDP . A UDP 1 1_555 J MN MN . A MN 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? 
metalc ? metalc3 A SG CYS 19 A CYS 80 1_555 G HG HG . A HG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.746 ? 
metalc ? metalc4 A O GLY 37 A GLY 98 1_555 G HG HG . A HG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.65 ? 
metalc ? metalc5 A OG1 THR 58 A THR 119 1_555 E HG HG . A HG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.878 ? 
metalc ? metalc6 A OG1 THR 58 A THR 119 1_555 H HG HG . A HG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.848 ? 
metalc ? metalc7 A SG CYS 148 A CYS 209 1_555 E HG HG . A HG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? 
metalc ? metalc8 A OD1 ASP 150 A ASP 211 1_555 J MN MN . A MN 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? 
metalc ? metalc9 A OD1 ASP 152 A ASP 213 1_555 J MN MN . A MN 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.437 ? 
metalc ? metalc10 A OD2 ASP 152 A ASP 213 1_555 J MN MN . A MN 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.774 ? 
metalc ? metalc11 A SG CYS 223 A CYS 284 1_555 D HG HG . A HG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? 
metalc ? metalc12 A SG CYS 223 A CYS 284 1_555 F HG HG . A HG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? 
metalc ? metalc13 A N CYS 223 A CYS 284 1_555 F HG HG . A HG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.419 ? 
metalc ? metalc14 A O HIS 244 A HIS 305 1_555 F HG HG . A HG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.204 ? 
metalc ? metalc15 D HG HG . A HG 401 1_555 K O HOH . A HOH 672 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? 
metalc ? metalc16 E HG HG . A HG 402 1_555 H HG HG . A HG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.49 ? 
metalc ? metalc17 E HG HG . A HG 402 1_555 K O HOH . A HOH 666 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? 
metalc ? metalc18 F HG HG . A HG 403 1_555 K O HOH . A HOH 668 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.633 ? 
metalc ? metalc19 F HG HG . A HG 403 1_555 K O HOH . A HOH 669 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.534 ? 
metalc ? metalc20 H HG HG . A HG 405 1_555 I CL CL . A CL 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.905 ? 
#
_chem_comp.formula           'Hg 2' 
_chem_comp.formula_weight    200.59 
_chem_comp.id                HG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MERCURY (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2A8U 
_atom_sites.fract_transf_matrix[1][1]    0.019055 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006636 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012618 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 UDP A 1 1 1 UDP UDP . 
D 4 HG A 1 401 401 HG HG . 
E 4 HG A 1 402 402 HG HG . 
F 4 HG A 1 403 403 HG HG . 
G 4 HG A 1 404 404 HG HG . 
H 4 HG A 1 405 405 HG HG . 
I 5 CL A 1 406 406 CL CL . 
J 6 MN A 1 450 450 MN MN . 
K 7 HOH A 1 501 501 HOH TIP . 
K 7 HOH A 2 502 502 HOH TIP . 
K 7 HOH A 3 503 503 HOH TIP . 
K 7 HOH A 4 504 504 HOH TIP . 
K 7 HOH A 5 505 505 HOH TIP . 
K 7 HOH A 6 506 506 HOH TIP . 
K 7 HOH A 7 507 507 HOH TIP . 
K 7 HOH A 8 508 508 HOH TIP . 
K 7 HOH A 9 509 509 HOH TIP . 
K 7 HOH A 10 510 510 HOH TIP . 
K 7 HOH A 11 511 511 HOH TIP . 
K 7 HOH A 12 512 512 HOH TIP . 
K 7 HOH A 13 513 513 HOH TIP . 
K 7 HOH A 14 514 514 HOH TIP . 
K 7 HOH A 15 515 515 HOH TIP . 
K 7 HOH A 16 516 516 HOH TIP . 
K 7 HOH A 17 517 517 HOH TIP . 
K 7 HOH A 18 518 518 HOH TIP . 
K 7 HOH A 19 519 519 HOH TIP . 
K 7 HOH A 20 520 520 HOH TIP . 
K 7 HOH A 21 521 521 HOH TIP . 
K 7 HOH A 22 522 522 HOH TIP . 
K 7 HOH A 23 523 523 HOH TIP . 
K 7 HOH A 24 524 524 HOH TIP . 
K 7 HOH A 25 525 525 HOH TIP . 
K 7 HOH A 26 526 526 HOH TIP . 
K 7 HOH A 27 527 527 HOH TIP . 
K 7 HOH A 28 528 528 HOH TIP . 
K 7 HOH A 29 529 529 HOH TIP . 
K 7 HOH A 30 530 530 HOH TIP . 
K 7 HOH A 31 531 531 HOH TIP . 
K 7 HOH A 32 532 532 HOH TIP . 
K 7 HOH A 33 533 533 HOH TIP . 
K 7 HOH A 34 534 534 HOH TIP . 
K 7 HOH A 35 535 535 HOH TIP . 
K 7 HOH A 36 536 536 HOH TIP . 
K 7 HOH A 37 537 537 HOH TIP . 
K 7 HOH A 38 538 538 HOH TIP . 
K 7 HOH A 39 539 539 HOH TIP . 
K 7 HOH A 40 540 540 HOH TIP . 
K 7 HOH A 41 541 541 HOH TIP . 
K 7 HOH A 42 542 542 HOH TIP . 
K 7 HOH A 43 543 543 HOH TIP . 
K 7 HOH A 44 544 544 HOH TIP . 
K 7 HOH A 45 545 545 HOH TIP . 
K 7 HOH A 46 546 546 HOH TIP . 
K 7 HOH A 47 547 547 HOH TIP . 
K 7 HOH A 48 548 548 HOH TIP . 
K 7 HOH A 49 549 549 HOH TIP . 
K 7 HOH A 50 550 550 HOH TIP . 
K 7 HOH A 51 551 551 HOH TIP . 
K 7 HOH A 52 552 552 HOH TIP . 
K 7 HOH A 53 553 553 HOH TIP . 
K 7 HOH A 54 554 554 HOH TIP . 
K 7 HOH A 55 555 555 HOH TIP . 
K 7 HOH A 56 556 556 HOH TIP . 
K 7 HOH A 57 557 557 HOH TIP . 
K 7 HOH A 58 558 558 HOH TIP . 
K 7 HOH A 59 559 559 HOH TIP . 
K 7 HOH A 60 560 560 HOH TIP . 
K 7 HOH A 61 561 561 HOH TIP . 
K 7 HOH A 62 562 562 HOH TIP . 
K 7 HOH A 63 563 563 HOH TIP . 
K 7 HOH A 64 564 564 HOH TIP . 
K 7 HOH A 65 565 565 HOH TIP . 
K 7 HOH A 66 566 566 HOH TIP . 
K 7 HOH A 67 567 567 HOH TIP . 
K 7 HOH A 68 568 568 HOH TIP . 
K 7 HOH A 69 569 569 HOH TIP . 
K 7 HOH A 70 570 570 HOH TIP . 
K 7 HOH A 71 571 571 HOH TIP . 
K 7 HOH A 72 572 572 HOH TIP . 
K 7 HOH A 73 573 573 HOH TIP . 
K 7 HOH A 74 574 574 HOH TIP . 
K 7 HOH A 75 575 575 HOH TIP . 
K 7 HOH A 76 576 576 HOH TIP . 
K 7 HOH A 77 577 577 HOH TIP . 
K 7 HOH A 78 578 578 HOH TIP . 
K 7 HOH A 79 579 579 HOH TIP . 
K 7 HOH A 80 580 580 HOH TIP . 
K 7 HOH A 81 581 581 HOH TIP . 
K 7 HOH A 82 582 582 HOH TIP . 
K 7 HOH A 83 583 583 HOH TIP . 
K 7 HOH A 84 584 584 HOH TIP . 
K 7 HOH A 85 585 585 HOH TIP . 
K 7 HOH A 86 586 586 HOH TIP . 
K 7 HOH A 87 587 587 HOH TIP . 
K 7 HOH A 88 588 588 HOH TIP . 
K 7 HOH A 89 589 589 HOH TIP . 
K 7 HOH A 90 590 590 HOH TIP . 
K 7 HOH A 91 591 591 HOH TIP . 
K 7 HOH A 92 592 592 HOH TIP . 
K 7 HOH A 93 593 593 HOH TIP . 
K 7 HOH A 94 594 594 HOH TIP . 
K 7 HOH A 95 595 595 HOH TIP . 
K 7 HOH A 96 596 596 HOH TIP . 
K 7 HOH A 97 597 597 HOH TIP . 
K 7 HOH A 98 598 598 HOH TIP . 
K 7 HOH A 99 599 599 HOH TIP . 
K 7 HOH A 100 600 600 HOH TIP . 
K 7 HOH A 101 601 601 HOH TIP . 
K 7 HOH A 102 602 602 HOH TIP . 
K 7 HOH A 103 603 603 HOH TIP . 
K 7 HOH A 104 604 604 HOH TIP . 
K 7 HOH A 105 605 605 HOH TIP . 
K 7 HOH A 106 606 606 HOH TIP . 
K 7 HOH A 107 607 607 HOH TIP . 
K 7 HOH A 108 608 608 HOH TIP . 
K 7 HOH A 109 609 609 HOH TIP . 
K 7 HOH A 110 610 610 HOH TIP . 
K 7 HOH A 111 611 611 HOH TIP . 
K 7 HOH A 112 612 612 HOH TIP . 
K 7 HOH A 113 613 613 HOH TIP . 
K 7 HOH A 114 614 614 HOH TIP . 
K 7 HOH A 115 615 615 HOH TIP . 
K 7 HOH A 116 616 616 HOH TIP . 
K 7 HOH A 117 617 617 HOH TIP . 
K 7 HOH A 118 618 618 HOH TIP . 
K 7 HOH A 119 619 619 HOH TIP . 
K 7 HOH A 120 620 620 HOH TIP . 
K 7 HOH A 121 621 621 HOH TIP . 
K 7 HOH A 122 622 622 HOH TIP . 
K 7 HOH A 123 623 623 HOH TIP . 
K 7 HOH A 124 624 624 HOH TIP . 
K 7 HOH A 125 625 625 HOH TIP . 
K 7 HOH A 126 626 626 HOH TIP . 
K 7 HOH A 127 627 627 HOH TIP . 
K 7 HOH A 128 628 628 HOH TIP . 
K 7 HOH A 129 629 629 HOH TIP . 
K 7 HOH A 130 630 630 HOH TIP . 
K 7 HOH A 131 631 631 HOH TIP . 
K 7 HOH A 132 632 632 HOH TIP . 
K 7 HOH A 133 633 633 HOH TIP . 
K 7 HOH A 134 634 634 HOH TIP . 
K 7 HOH A 135 635 635 HOH TIP . 
K 7 HOH A 136 636 636 HOH TIP . 
K 7 HOH A 137 637 637 HOH TIP . 
K 7 HOH A 138 638 638 HOH TIP . 
K 7 HOH A 139 639 639 HOH TIP . 
K 7 HOH A 140 640 640 HOH TIP . 
K 7 HOH A 141 641 641 HOH TIP . 
K 7 HOH A 142 642 642 HOH TIP . 
K 7 HOH A 143 643 643 HOH TIP . 
K 7 HOH A 144 644 644 HOH TIP . 
K 7 HOH A 145 645 645 HOH TIP . 
K 7 HOH A 146 646 646 HOH TIP . 
K 7 HOH A 147 647 647 HOH TIP . 
K 7 HOH A 148 648 648 HOH TIP . 
K 7 HOH A 149 649 649 HOH TIP . 
K 7 HOH A 150 650 650 HOH TIP . 
K 7 HOH A 151 651 651 HOH TIP . 
K 7 HOH A 152 652 652 HOH TIP . 
K 7 HOH A 153 653 653 HOH TIP . 
K 7 HOH A 154 654 654 HOH TIP . 
K 7 HOH A 155 655 655 HOH TIP . 
K 7 HOH A 156 656 656 HOH TIP . 
K 7 HOH A 157 657 657 HOH TIP . 
K 7 HOH A 158 658 658 HOH TIP . 
K 7 HOH A 159 659 659 HOH TIP . 
K 7 HOH A 160 660 660 HOH TIP . 
K 7 HOH A 161 661 661 HOH TIP . 
K 7 HOH A 162 662 662 HOH TIP . 
K 7 HOH A 163 663 663 HOH TIP . 
K 7 HOH A 164 664 664 HOH TIP . 
K 7 HOH A 165 665 665 HOH TIP . 
K 7 HOH A 166 666 666 HOH TIP . 
K 7 HOH A 167 667 667 HOH TIP . 
K 7 HOH A 168 668 668 HOH TIP . 
K 7 HOH A 169 669 669 HOH TIP . 
K 7 HOH A 170 670 670 HOH TIP . 
K 7 HOH A 171 671 671 HOH TIP . 
K 7 HOH A 172 672 672 HOH TIP . 
K 7 HOH A 173 673 673 HOH TIP . 
K 7 HOH A 174 674 674 HOH TIP . 
K 7 HOH A 175 675 675 HOH TIP . 
K 7 HOH A 176 676 676 HOH TIP . 
K 7 HOH A 177 677 677 HOH TIP . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           HG 
_atom_site.label_atom_id         HG 
_atom_site.label_comp_id         HG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         H 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               13.325 
_atom_site.Cartn_y               48.113 
_atom_site.Cartn_z               38.998 
_atom_site.occupancy             0.2 
_atom_site.B_iso_or_equiv        33.81 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          HG 
_atom_site.auth_comp_id          HG 
_atom_site.auth_seq_id           405 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#