data_2A91 # _model_server_result.job_id vznuEqCciu83slfhadjQPg _model_server_result.datetime_utc '2024-12-21 16:49:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2a91 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":911}' # _entry.id 2A91 # _exptl.entry_id 2A91 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2A91 _cell.length_a 75.957 _cell.length_b 82.243 _cell.length_c 110.063 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2A91 _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B NAG 1 B 1 NAG ? 951 NAG 2 n B NAG 2 B 2 NAG ? 952 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 5 A CYS 5 1_555 A SG CYS 32 A CYS 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf2 A SG CYS 141 A CYS 141 1_555 A SG CYS 171 A CYS 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 A SG CYS 174 A CYS 174 1_555 A SG CYS 183 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf4 A SG CYS 178 A CYS 178 1_555 A SG CYS 191 A CYS 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf5 A SG CYS 199 A CYS 199 1_555 A SG CYS 206 A CYS 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf6 A SG CYS 203 A CYS 203 1_555 A SG CYS 214 A CYS 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf7 A SG CYS 215 A CYS 215 1_555 A SG CYS 223 A CYS 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf8 A SG CYS 219 A CYS 219 1_555 A SG CYS 231 A CYS 231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf9 A SG CYS 234 A CYS 234 1_555 A SG CYS 243 A CYS 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf10 A SG CYS 247 A CYS 247 1_555 A SG CYS 274 A CYS 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf11 A SG CYS 278 A CYS 278 1_555 A SG CYS 290 A CYS 290 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf12 A SG CYS 294 A CYS 294 1_555 A SG CYS 310 A CYS 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf13 A SG CYS 313 A CYS 313 1_555 A SG CYS 317 A CYS 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf14 A SG CYS 321 A CYS 321 1_555 A SG CYS 346 A CYS 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf15 A SG CYS 454 A CYS 454 1_555 A SG CYS 483 A CYS 483 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf16 A SG CYS 490 A CYS 490 1_555 A SG CYS 499 A CYS 499 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf17 A SG CYS 494 A CYS 494 1_555 A SG CYS 507 A CYS 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? covale ? covale1 A ND2 ASN 47 A ASN 47 1_555 C C1 NAG . A NAG 911 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? covale ? covale2 A ND2 ASN 166 A ASN 166 1_555 D C1 NAG . A NAG 941 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? covale ? covale3 A ND2 ASN 238 A ASN 238 1_555 B C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale4 B O4 NAG . B NAG 1 1_555 B C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.388 ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NAG sing 237 n n C1 O1 NAG sing 238 n n C1 O5 NAG sing 239 n n C1 H1 NAG sing 240 n n C2 C3 NAG sing 241 n n C2 N2 NAG sing 242 n n C2 H2 NAG sing 243 n n C3 C4 NAG sing 244 n n C3 O3 NAG sing 245 n n C3 H3 NAG sing 246 n n C4 C5 NAG sing 247 n n C4 O4 NAG sing 248 n n C4 H4 NAG sing 249 n n C5 C6 NAG sing 250 n n C5 O5 NAG sing 251 n n C5 H5 NAG sing 252 n n C6 O6 NAG sing 253 n n C6 H61 NAG sing 254 n n C6 H62 NAG sing 255 n n C7 C8 NAG sing 256 n n C7 N2 NAG sing 257 n n C7 O7 NAG doub 258 n n C8 H81 NAG sing 259 n n C8 H82 NAG sing 260 n n C8 H83 NAG sing 261 n n N2 HN2 NAG sing 262 n n O1 HO1 NAG sing 263 n n O3 HO3 NAG sing 264 n n O4 HO4 NAG sing 265 n n O6 HO6 NAG sing 266 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 2A91 _atom_sites.fract_transf_matrix[1][1] 0.013165 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012159 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009086 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG A 1 911 911 NAG NAG . D 3 NAG A 1 941 941 NAG NAG . E 4 HOH A 1 601 601 HOH HOH . E 4 HOH A 2 602 602 HOH HOH . E 4 HOH A 3 603 603 HOH HOH . E 4 HOH A 4 604 604 HOH HOH . E 4 HOH A 5 605 605 HOH HOH . E 4 HOH A 6 606 606 HOH HOH . E 4 HOH A 7 607 607 HOH HOH . E 4 HOH A 8 608 608 HOH HOH . E 4 HOH A 9 609 609 HOH HOH . E 4 HOH A 10 610 610 HOH HOH . E 4 HOH A 11 611 611 HOH HOH . E 4 HOH A 12 612 612 HOH HOH . E 4 HOH A 13 613 613 HOH HOH . E 4 HOH A 14 614 614 HOH HOH . E 4 HOH A 15 615 615 HOH HOH . E 4 HOH A 16 616 616 HOH HOH . E 4 HOH A 17 617 617 HOH HOH . E 4 HOH A 18 618 618 HOH HOH . E 4 HOH A 19 619 619 HOH HOH . E 4 HOH A 20 620 620 HOH HOH . E 4 HOH A 21 621 621 HOH HOH . E 4 HOH A 22 622 622 HOH HOH . E 4 HOH A 23 623 623 HOH HOH . E 4 HOH A 24 624 624 HOH HOH . E 4 HOH A 25 625 625 HOH HOH . E 4 HOH A 26 626 626 HOH HOH . E 4 HOH A 27 627 627 HOH HOH . E 4 HOH A 28 628 628 HOH HOH . E 4 HOH A 29 629 629 HOH HOH . E 4 HOH A 30 630 630 HOH HOH . E 4 HOH A 31 631 631 HOH HOH . E 4 HOH A 32 632 632 HOH HOH . E 4 HOH A 33 633 633 HOH HOH . E 4 HOH A 34 634 634 HOH HOH . E 4 HOH A 35 635 635 HOH HOH . E 4 HOH A 36 636 636 HOH HOH . E 4 HOH A 37 637 637 HOH HOH . E 4 HOH A 38 638 638 HOH HOH . E 4 HOH A 39 639 639 HOH HOH . E 4 HOH A 40 640 640 HOH HOH . E 4 HOH A 41 641 641 HOH HOH . E 4 HOH A 42 642 642 HOH HOH . E 4 HOH A 43 643 643 HOH HOH . E 4 HOH A 44 644 644 HOH HOH . E 4 HOH A 45 645 645 HOH HOH . E 4 HOH A 46 646 646 HOH HOH . E 4 HOH A 47 647 647 HOH HOH . E 4 HOH A 48 648 648 HOH HOH . E 4 HOH A 49 649 649 HOH HOH . E 4 HOH A 50 650 650 HOH HOH . E 4 HOH A 51 651 651 HOH HOH . E 4 HOH A 52 652 652 HOH HOH . E 4 HOH A 53 653 653 HOH HOH . E 4 HOH A 54 654 654 HOH HOH . E 4 HOH A 55 655 655 HOH HOH . E 4 HOH A 56 656 656 HOH HOH . E 4 HOH A 57 657 657 HOH HOH . E 4 HOH A 58 658 658 HOH HOH . E 4 HOH A 59 659 659 HOH HOH . E 4 HOH A 60 660 660 HOH HOH . E 4 HOH A 61 661 661 HOH HOH . E 4 HOH A 62 662 662 HOH HOH . E 4 HOH A 63 663 663 HOH HOH . E 4 HOH A 64 664 664 HOH HOH . E 4 HOH A 65 665 665 HOH HOH . E 4 HOH A 66 666 666 HOH HOH . E 4 HOH A 67 667 667 HOH HOH . E 4 HOH A 68 668 668 HOH HOH . E 4 HOH A 69 669 669 HOH HOH . E 4 HOH A 70 670 670 HOH HOH . E 4 HOH A 71 671 671 HOH HOH . E 4 HOH A 72 672 672 HOH HOH . E 4 HOH A 73 673 673 HOH HOH . E 4 HOH A 74 674 674 HOH HOH . E 4 HOH A 75 675 675 HOH HOH . E 4 HOH A 76 676 676 HOH HOH . E 4 HOH A 77 677 677 HOH HOH . E 4 HOH A 78 678 678 HOH HOH . E 4 HOH A 79 679 679 HOH HOH . E 4 HOH A 80 680 680 HOH HOH . E 4 HOH A 81 681 681 HOH HOH . E 4 HOH A 82 682 682 HOH HOH . E 4 HOH A 83 683 683 HOH HOH . E 4 HOH A 84 684 684 HOH HOH . E 4 HOH A 85 685 685 HOH HOH . E 4 HOH A 86 686 686 HOH HOH . E 4 HOH A 87 687 687 HOH HOH . E 4 HOH A 88 688 688 HOH HOH . E 4 HOH A 89 689 689 HOH HOH . E 4 HOH A 90 690 690 HOH HOH . E 4 HOH A 91 691 691 HOH HOH . E 4 HOH A 92 692 692 HOH HOH . E 4 HOH A 93 693 693 HOH HOH . E 4 HOH A 94 694 694 HOH HOH . E 4 HOH A 95 695 695 HOH HOH . E 4 HOH A 96 696 696 HOH HOH . E 4 HOH A 97 697 697 HOH HOH . E 4 HOH A 98 698 698 HOH HOH . E 4 HOH A 99 699 699 HOH HOH . E 4 HOH A 100 700 700 HOH HOH . E 4 HOH A 101 701 701 HOH HOH . E 4 HOH A 102 702 702 HOH HOH . E 4 HOH A 103 703 703 HOH HOH . E 4 HOH A 104 704 704 HOH HOH . E 4 HOH A 105 705 705 HOH HOH . E 4 HOH A 106 706 706 HOH HOH . E 4 HOH A 107 707 707 HOH HOH . E 4 HOH A 108 708 708 HOH HOH . E 4 HOH A 109 709 709 HOH HOH . E 4 HOH A 110 710 710 HOH HOH . E 4 HOH A 111 711 711 HOH HOH . E 4 HOH A 112 712 712 HOH HOH . E 4 HOH A 113 713 713 HOH HOH . E 4 HOH A 114 714 714 HOH HOH . E 4 HOH A 115 715 715 HOH HOH . E 4 HOH A 116 716 716 HOH HOH . E 4 HOH A 117 717 717 HOH HOH . E 4 HOH A 118 718 718 HOH HOH . E 4 HOH A 119 719 719 HOH HOH . E 4 HOH A 120 720 720 HOH HOH . E 4 HOH A 121 721 721 HOH HOH . E 4 HOH A 122 722 722 HOH HOH . E 4 HOH A 123 723 723 HOH HOH . E 4 HOH A 124 724 724 HOH HOH . E 4 HOH A 125 725 725 HOH HOH . E 4 HOH A 126 726 726 HOH HOH . E 4 HOH A 127 727 727 HOH HOH . E 4 HOH A 128 728 728 HOH HOH . E 4 HOH A 129 729 729 HOH HOH . E 4 HOH A 130 731 731 HOH HOH . E 4 HOH A 131 732 732 HOH HOH . E 4 HOH A 132 733 733 HOH HOH . E 4 HOH A 133 734 734 HOH HOH . E 4 HOH A 134 735 735 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . C 3 72.132 24.58 59.897 1 88.45 ? C1 NAG 911 A 1 HETATM 2 C C2 NAG . . . C 3 71.432 23.893 61.092 1 90.78 ? C2 NAG 911 A 1 HETATM 3 C C3 NAG . . . C 3 70.831 24.939 62.047 1 91.07 ? C3 NAG 911 A 1 HETATM 4 C C4 NAG . . . C 3 71.879 25.985 62.436 1 91.28 ? C4 NAG 911 A 1 HETATM 5 C C5 NAG . . . C 3 72.494 26.594 61.17 1 91.2 ? C5 NAG 911 A 1 HETATM 6 C C6 NAG . . . C 3 73.588 27.607 61.477 1 91.15 ? C6 NAG 911 A 1 HETATM 7 C C7 NAG . . . C 3 70.502 21.689 60.728 1 93.5 ? C7 NAG 911 A 1 HETATM 8 C C8 NAG . . . C 3 69.801 20.845 59.672 1 93.63 ? C8 NAG 911 A 1 HETATM 9 N N2 NAG . . . C 3 70.376 23.011 60.624 1 92.23 ? N2 NAG 911 A 1 HETATM 10 O O3 NAG . . . C 3 70.344 24.295 63.218 1 90.85 ? O3 NAG 911 A 1 HETATM 11 O O4 NAG . . . C 3 71.274 27.004 63.221 1 91.82 ? O4 NAG 911 A 1 HETATM 12 O O5 NAG . . . C 3 73.089 25.551 60.36 1 90.01 ? O5 NAG 911 A 1 HETATM 13 O O6 NAG . . . C 3 73.105 28.667 62.292 1 89.63 ? O6 NAG 911 A 1 HETATM 14 O O7 NAG . . . C 3 71.152 21.141 61.623 1 93.42 ? O7 NAG 911 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #