data_2ACH
#
_model_server_result.job_id            vQdnbRevZL0whCV4tAEhVQ 
_model_server_result.datetime_utc      '2024-10-18 16:21:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2ach 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":550}' 
#
_entry.id    2ACH 
#
_exptl.entry_id    2ACH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.971 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2ACH 
_cell.length_a            75.3 
_cell.length_b            75.3 
_cell.length_c            208 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2ACH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA tetrameric 4 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G 1 1 
A,B,C,D,E,F,G 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_775 -y+2,-x+2,-z+1/2 0 -1 0 -1 0 0 0 0 -1 150.6 150.6 104 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_pdbx_entity_branch.entity_id
_pdbx_entity_branch.type
3 oligosaccharide 
4 oligosaccharide 
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.details
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.atom_stereo_config_1
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.atom_stereo_config_2
_pdbx_entity_branch_link.value_order
1 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 
2 ? 3 3 2 BMA NAG C1 O1 . O4 HO4 . sing 
3 ? 4 2 1 NAG NAG C1 O1 . O4 HO4 . sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
3 n C NAG 1 C 1 NAG ? 520 NAG 
3 n C NAG 2 C 2 NAG ? 522 NAG 
3 n C BMA 3 C 3 BMA ? 523 MAN 
4 n D NAG 1 D 1 NAG ? 540 NAG 
4 n D NAG 2 D 2 NAG ? 542 NAG 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A ND2 ASN 70 A ASN 70 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? 
covale ? covale2 A ND2 ASN 104 A ASN 104 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.402 ? 
covale ? covale3 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.395 ? 
covale ? covale4 C O4 NAG . C NAG 2 1_555 C C1 BMA . C BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? 
covale ? covale5 D O4 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
#
_chem_comp.formula           'O4 P -3' 
_chem_comp.formula_weight    94.971 
_chem_comp.id                PO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2ACH 
_atom_sites.fract_transf_matrix[1][1]    0.01328 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01328 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004808 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 PO4 A 1 550 550 PO4 PO4 . 
F 6 HOH A 1 600 600 HOH HOH . 
F 6 HOH A 2 601 602 HOH HOH . 
F 6 HOH A 3 602 607 HOH HOH . 
F 6 HOH A 4 603 608 HOH HOH . 
F 6 HOH A 5 604 609 HOH HOH . 
F 6 HOH A 6 605 610 HOH HOH . 
F 6 HOH A 7 606 611 HOH HOH . 
F 6 HOH A 8 607 612 HOH HOH . 
F 6 HOH A 9 608 618 HOH HOH . 
F 6 HOH A 10 609 619 HOH HOH . 
F 6 HOH A 11 610 620 HOH HOH . 
F 6 HOH A 12 611 629 HOH HOH . 
F 6 HOH A 13 612 630 HOH HOH . 
F 6 HOH A 14 613 631 HOH HOH . 
F 6 HOH A 15 614 632 HOH HOH . 
F 6 HOH A 16 615 637 HOH HOH . 
F 6 HOH A 17 616 639 HOH HOH . 
F 6 HOH A 18 617 640 HOH HOH . 
F 6 HOH A 19 618 646 HOH HOH . 
F 6 HOH A 20 619 650 HOH HOH . 
F 6 HOH A 21 620 657 HOH HOH . 
F 6 HOH A 22 621 667 HOH HOH . 
F 6 HOH A 23 622 671 HOH HOH . 
F 6 HOH A 24 623 673 HOH HOH . 
F 6 HOH A 25 624 692 HOH HOH . 
F 6 HOH A 26 625 727 HOH HOH . 
F 6 HOH A 27 626 749 HOH HOH . 
F 6 HOH A 28 627 769 HOH HOH . 
F 6 HOH A 29 628 773 HOH HOH . 
F 6 HOH A 30 629 777 HOH HOH . 
F 6 HOH A 31 630 778 HOH HOH . 
F 6 HOH A 32 631 785 HOH HOH . 
F 6 HOH A 33 632 792 HOH HOH . 
F 6 HOH A 34 633 806 HOH HOH . 
F 6 HOH A 35 634 819 HOH HOH . 
F 6 HOH A 36 635 836 HOH HOH . 
F 6 HOH A 37 636 840 HOH HOH . 
F 6 HOH A 38 637 900 HOH HOH . 
F 6 HOH A 39 638 907 HOH HOH . 
F 6 HOH A 40 639 918 HOH HOH . 
F 6 HOH A 41 640 919 HOH HOH . 
F 6 HOH A 42 641 924 HOH HOH . 
F 6 HOH A 43 642 925 HOH HOH . 
F 6 HOH A 44 643 929 HOH HOH . 
F 6 HOH A 45 644 934 HOH HOH . 
F 6 HOH A 46 645 950 HOH HOH . 
F 6 HOH A 47 646 94 HOH HOH . 
F 6 HOH A 48 647 99 HOH HOH . 
F 6 HOH A 49 648 115 HOH HOH . 
F 6 HOH A 50 649 229 HOH HOH . 
F 6 HOH A 51 650 261 HOH HOH . 
F 6 HOH A 52 651 271 HOH HOH . 
F 6 HOH A 53 652 567 HOH HOH . 
F 6 HOH A 54 653 936 HOH HOH . 
F 6 HOH A 55 654 989 HOH HOH . 
F 6 HOH A 56 655 107 HOH HOH . 
F 6 HOH A 57 656 1 HOH HOH . 
F 6 HOH A 58 657 2 HOH HOH . 
F 6 HOH A 59 658 7 HOH HOH . 
F 6 HOH A 60 659 8 HOH HOH . 
F 6 HOH A 61 660 10 HOH HOH . 
F 6 HOH A 62 661 11 HOH HOH . 
F 6 HOH A 63 662 15 HOH HOH . 
F 6 HOH A 64 663 17 HOH HOH . 
F 6 HOH A 65 664 23 HOH HOH . 
F 6 HOH A 66 665 25 HOH HOH . 
F 6 HOH A 67 666 31 HOH HOH . 
F 6 HOH A 68 667 32 HOH HOH . 
F 6 HOH A 69 668 34 HOH HOH . 
F 6 HOH A 70 669 40 HOH HOH . 
F 6 HOH A 71 670 43 HOH HOH . 
F 6 HOH A 72 671 47 HOH HOH . 
F 6 HOH A 73 672 52 HOH HOH . 
F 6 HOH A 74 673 65 HOH HOH . 
F 6 HOH A 75 674 66 HOH HOH . 
F 6 HOH A 76 675 67 HOH HOH . 
F 6 HOH A 77 676 69 HOH HOH . 
F 6 HOH A 78 677 71 HOH HOH . 
F 6 HOH A 79 678 98 HOH HOH . 
F 6 HOH A 80 679 106 HOH HOH . 
G 6 HOH B 1 613 613 HOH HOH . 
G 6 HOH B 2 614 622 HOH HOH . 
G 6 HOH B 3 615 761 HOH HOH . 
G 6 HOH B 4 616 484 HOH HOH . 
G 6 HOH B 5 617 581 HOH HOH . 
G 6 HOH B 6 618 107 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PO4 . . . E 5 74.24 76.348 51.983 0.5 22 ? P PO4 550 A 1 
HETATM 2 O O1 PO4 . . . E 5 73.793 77.195 50.782 0.5 22 ? O1 PO4 550 A 1 
HETATM 3 O O2 PO4 . . . E 5 73.969 74.869 51.688 0.5 22 ? O2 PO4 550 A 1 
HETATM 4 O O3 PO4 . . . E 5 75.742 76.553 52.223 0.5 22 ? O3 PO4 550 A 1 
HETATM 5 O O4 PO4 . . . E 5 73.456 76.772 53.236 0.5 22 ? O4 PO4 550 A 1 
#
_model_server_stats.io_time_ms              55 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           275 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           5 
#