data_2ACL
#
_model_server_result.job_id            2bKNFq1C_cAzL6kwEhvZWw 
_model_server_result.datetime_utc      '2024-10-24 12:11:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2acl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":501}' 
#
_entry.id    2ACL 
#
_exptl.entry_id    2ACL 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              300.435 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'RETINOIC ACID' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         88.98 
_cell.angle_beta          75.2 
_cell.angle_gamma         78.27 
_cell.entry_id            2ACL 
_cell.length_a            60.77 
_cell.length_b            81.95 
_cell.length_c            111.44 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2ACL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
PISA dimeric 2 author_and_software_defined_assembly 4 
PISA tetrameric 4 software_defined_assembly 5 
PISA tetrameric 4 software_defined_assembly 6 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,I,J,Q,R 1 1 
C,D,K,L,S,T 2 1 
E,F,M,N,U,V 3 1 
G,H,O,P,W,X 4 1 
C,D,G,H,K,L,O,P,S,T,W,X 5 1 
A,B,E,F,I,J,M,N,Q,R,U,V 6 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 I N N 
? 3 K N N 
? 3 M N N 
? 3 O N N 
#
_chem_comp.formula           'C20 H28 O2' 
_chem_comp.formula_weight    300.435 
_chem_comp.id                REA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'RETINOIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 REA sing 329 n n 
C1 C6 REA sing 330 n n 
C1 C16 REA sing 331 n n 
C1 C17 REA sing 332 n n 
C2 C3 REA sing 333 n n 
C2 H21 REA sing 334 n n 
C2 H22 REA sing 335 n n 
C3 C4 REA sing 336 n n 
C3 H31 REA sing 337 n n 
C3 H32 REA sing 338 n n 
C4 C5 REA sing 339 n n 
C4 H41 REA sing 340 n n 
C4 H42 REA sing 341 n n 
C5 C6 REA doub 342 n n 
C5 C18 REA sing 343 n n 
C6 C7 REA sing 344 n n 
C7 C8 REA doub 345 e n 
C7 H7 REA sing 346 n n 
C8 C9 REA sing 347 n n 
C8 H8 REA sing 348 n n 
C9 C10 REA doub 349 e n 
C9 C19 REA sing 350 n n 
C10 C11 REA sing 351 n n 
C10 H10 REA sing 352 n n 
C11 C12 REA doub 353 e n 
C11 H11 REA sing 354 n n 
C12 C13 REA sing 355 n n 
C12 H12 REA sing 356 n n 
C13 C14 REA doub 357 e n 
C13 C20 REA sing 358 n n 
C14 C15 REA sing 359 n n 
C14 H14 REA sing 360 n n 
C15 O1 REA doub 361 n n 
C15 O2 REA sing 362 n n 
C16 H161 REA sing 363 n n 
C16 H162 REA sing 364 n n 
C16 H163 REA sing 365 n n 
C17 H171 REA sing 366 n n 
C17 H172 REA sing 367 n n 
C17 H173 REA sing 368 n n 
C18 H181 REA sing 369 n n 
C18 H182 REA sing 370 n n 
C18 H183 REA sing 371 n n 
C19 H191 REA sing 372 n n 
C19 H192 REA sing 373 n n 
C19 H193 REA sing 374 n n 
C20 H201 REA sing 375 n n 
C20 H202 REA sing 376 n n 
C20 H203 REA sing 377 n n 
O2 HO2 REA sing 378 n n 
#
_atom_sites.entry_id                     2ACL 
_atom_sites.fract_transf_matrix[1][1]    0.016455 
_atom_sites.fract_transf_matrix[1][2]    -0.003417 
_atom_sites.fract_transf_matrix[1][3]    -0.004474 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012463 
_atom_sites.fract_transf_matrix[2][3]    0.00045 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009287 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 REA A 1 502 501 REA REA . 
J 4 L05 B 1 101 1 L05 L05 . 
K 3 REA C 1 503 501 REA REA . 
L 4 L05 D 1 102 1 L05 L05 . 
M 3 REA E 1 504 501 REA REA . 
N 4 L05 F 1 103 1 L05 L05 . 
O 3 REA G 1 501 501 REA REA . 
P 4 L05 H 1 104 1 L05 L05 . 
Q 5 HOH A 1 12 12 HOH HOH . 
Q 5 HOH A 2 21 21 HOH HOH . 
Q 5 HOH A 3 25 25 HOH HOH . 
Q 5 HOH A 4 30 30 HOH HOH . 
Q 5 HOH A 5 33 33 HOH HOH . 
R 5 HOH B 1 11 11 HOH HOH . 
R 5 HOH B 2 14 14 HOH HOH . 
R 5 HOH B 3 16 16 HOH HOH . 
R 5 HOH B 4 36 36 HOH HOH . 
S 5 HOH C 1 1 1 HOH HOH . 
S 5 HOH C 2 23 23 HOH HOH . 
S 5 HOH C 3 32 32 HOH HOH . 
T 5 HOH D 1 4 4 HOH HOH . 
T 5 HOH D 2 13 13 HOH HOH . 
T 5 HOH D 3 15 15 HOH HOH . 
T 5 HOH D 4 20 20 HOH HOH . 
T 5 HOH D 5 27 27 HOH HOH . 
T 5 HOH D 6 31 31 HOH HOH . 
T 5 HOH D 7 35 35 HOH HOH . 
U 5 HOH E 1 10 10 HOH HOH . 
U 5 HOH E 2 26 26 HOH HOH . 
U 5 HOH E 3 34 34 HOH HOH . 
U 5 HOH E 4 38 38 HOH HOH . 
V 5 HOH F 1 2 2 HOH HOH . 
V 5 HOH F 2 5 5 HOH HOH . 
V 5 HOH F 3 7 7 HOH HOH . 
V 5 HOH F 4 9 9 HOH HOH . 
V 5 HOH F 5 24 24 HOH HOH . 
V 5 HOH F 6 29 29 HOH HOH . 
W 5 HOH G 1 3 3 HOH HOH . 
W 5 HOH G 2 17 17 HOH HOH . 
W 5 HOH G 3 18 18 HOH HOH . 
W 5 HOH G 4 22 22 HOH HOH . 
W 5 HOH G 5 28 28 HOH HOH . 
X 5 HOH H 1 19 19 HOH HOH . 
X 5 HOH H 2 37 37 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 REA . . . O 3 35.146 17.762 40.322 1 18.4 ? C1 REA 501 G 1 
HETATM 2 C C2 REA . . . O 3 33.728 17.272 40.767 1 17.42 ? C2 REA 501 G 1 
HETATM 3 C C3 REA . . . O 3 32.66 17.259 39.705 1 16.16 ? C3 REA 501 G 1 
HETATM 4 C C4 REA . . . O 3 32.483 18.589 39.047 1 15.48 ? C4 REA 501 G 1 
HETATM 5 C C5 REA . . . O 3 33.802 19.309 38.712 1 11.74 ? C5 REA 501 G 1 
HETATM 6 C C6 REA . . . O 3 35.025 18.956 39.275 1 15.65 ? C6 REA 501 G 1 
HETATM 7 C C7 REA . . . O 3 36.344 19.611 38.989 1 15.99 ? C7 REA 501 G 1 
HETATM 8 C C8 REA . . . O 3 36.918 19.798 37.799 1 19.05 ? C8 REA 501 G 1 
HETATM 9 C C9 REA . . . O 3 38.189 20.416 37.475 1 20.32 ? C9 REA 501 G 1 
HETATM 10 C C10 REA . . . O 3 38.546 20.499 36.161 1 21.52 ? C10 REA 501 G 1 
HETATM 11 C C11 REA . . . O 3 37.765 20.001 35.027 1 21.32 ? C11 REA 501 G 1 
HETATM 12 C C12 REA . . . O 3 38.227 20.204 33.782 1 21.19 ? C12 REA 501 G 1 
HETATM 13 C C13 REA . . . O 3 37.543 19.766 32.573 1 21 ? C13 REA 501 G 1 
HETATM 14 C C14 REA . . . O 3 38.118 20.091 31.381 1 22.23 ? C14 REA 501 G 1 
HETATM 15 C C15 REA . . . O 3 37.677 19.846 29.986 1 25.73 ? C15 REA 501 G 1 
HETATM 16 C C16 REA . . . O 3 35.876 16.562 39.678 1 20.97 ? C16 REA 501 G 1 
HETATM 17 C C17 REA . . . O 3 35.938 18.226 41.586 1 16.27 ? C17 REA 501 G 1 
HETATM 18 C C18 REA . . . O 3 33.51 20.413 37.708 1 12.98 ? C18 REA 501 G 1 
HETATM 19 C C19 REA . . . O 3 39.105 20.97 38.583 1 21.9 ? C19 REA 501 G 1 
HETATM 20 C C20 REA . . . O 3 36.203 18.995 32.695 1 24.78 ? C20 REA 501 G 1 
HETATM 21 O O1 REA . . . O 3 38.057 20.651 29.099 1 26.36 ? O1 REA 501 G 1 
HETATM 22 O O2 REA . . . O 3 36.922 18.882 29.706 1 26.4 ? O2 REA 501 G 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    42 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           22 
#