data_2ACZ
#
_model_server_result.job_id            QqiJf_WL6VkghSwQo4zGNQ 
_model_server_result.datetime_utc      '2024-11-24 14:33:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2acz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":130}' 
#
_entry.id    2ACZ 
#
_exptl.entry_id    2ACZ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              618.503 
_entity.id                          10 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'HEME B/C' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2ACZ 
_cell.length_a            138.759 
_cell.length_b            138.759 
_cell.length_c            521.873 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2ACZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3 2' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    dodecameric 
_pdbx_struct_assembly.oligomeric_count      12 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_765 -y+2,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 208.1385 120.168819 0 
3 'crystal symmetry operation' 3_675 -x+y+1,-x+2,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 240.337638 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      10 
_struct_asym.id                             J 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NE2 HIS 45 A HIS 45 1_555 F C8M FAD . A FAD 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? 
metalc ? metalc1 B SG CYS 55 B CYS 55 1_555 G FE2 FES . B FES 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? 
metalc ? metalc2 B SG CYS 60 B CYS 60 1_555 G FE2 FES . B FES 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? 
metalc ? metalc3 B OD2 ASP 63 B ASP 63 1_555 G FE1 FES . B FES 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? 
metalc ? metalc4 B OD1 ASP 63 B ASP 63 1_555 G FE1 FES . B FES 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? 
metalc ? metalc5 B SG CYS 75 B CYS 75 1_555 G FE1 FES . B FES 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.581 ? 
metalc ? metalc6 B SG CYS 149 B CYS 149 1_555 H FE2 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 4.883 ? 
metalc ? metalc7 B SG CYS 152 B CYS 152 1_555 H FE4 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? 
metalc ? metalc8 B SG CYS 155 B CYS 155 1_555 H FE1 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? 
metalc ? metalc9 B SG CYS 159 B CYS 159 1_555 I FE4 F3S . B F3S 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? 
metalc ? metalc10 B SG CYS 206 B CYS 206 1_555 I FE1 F3S . B F3S 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? 
metalc ? metalc11 B SG CYS 212 B CYS 212 1_555 I FE3 F3S . B F3S 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? 
metalc ? metalc12 B SG CYS 216 B CYS 216 1_555 H FE3 SF4 . B SF4 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 4.968 ? 
metalc ? metalc13 C NE2 HIS 84 C HIS 84 1_555 J FE HEB . C HEB 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? 
metalc ? metalc14 J FE HEB . C HEB 130 1_555 D NE2 HIS 71 D HIS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? 
#
_chem_comp.formula           'C34 H34 Fe N4 O4' 
_chem_comp.formula_weight    618.503 
_chem_comp.id                HEB 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'HEME B/C' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'HYBRID BETWEEN B AND C TYPE HEMES (PROTOPORPHYRIN IX CONTAINING FE)' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
FE NA HEB sing 473 n n 
FE NB HEB sing 474 n n 
FE NC HEB sing 475 n n 
FE ND HEB sing 476 n n 
CHA C1A HEB doub 477 n n 
CHA C4D HEB sing 478 n n 
CHA HHA HEB sing 479 n n 
CHB C4A HEB doub 480 n n 
CHB C1B HEB sing 481 n n 
CHB HHB HEB sing 482 n n 
CHC C4B HEB doub 483 n n 
CHC C1C HEB sing 484 n n 
CHC HHC HEB sing 485 n n 
CHD C4C HEB sing 486 n n 
CHD C1D HEB doub 487 n n 
CHD HHD HEB sing 488 n n 
NA C1A HEB sing 489 n n 
NA C4A HEB sing 490 n n 
C1A C2A HEB sing 491 n n 
C2A C3A HEB doub 492 n n 
C2A CAA HEB sing 493 n n 
C3A C4A HEB sing 494 n n 
C3A CMA HEB sing 495 n n 
CMA HMA1 HEB sing 496 n n 
CMA HMA2 HEB sing 497 n n 
CMA HMA3 HEB sing 498 n n 
CAA CBA HEB sing 499 n n 
CAA HAA1 HEB sing 500 n n 
CAA HAA2 HEB sing 501 n n 
CBA CGA HEB sing 502 n n 
CBA HBA1 HEB sing 503 n n 
CBA HBA2 HEB sing 504 n n 
CGA O1A HEB doub 505 n n 
CGA O2A HEB sing 506 n n 
O2A H2A HEB sing 507 n n 
NB C1B HEB doub 508 n n 
NB C4B HEB sing 509 n n 
C1B C2B HEB sing 510 n n 
C2B C3B HEB doub 511 n n 
C2B CMB HEB sing 512 n n 
C3B C4B HEB sing 513 n n 
C3B CAB HEB sing 514 n n 
CMB HMB1 HEB sing 515 n n 
CMB HMB2 HEB sing 516 n n 
CMB HMB3 HEB sing 517 n n 
CAB CBB HEB sing 518 n n 
CAB HAB HEB sing 519 n n 
CAB HAB2 HEB sing 520 n n 
CBB HBB1 HEB sing 521 n n 
CBB HBB2 HEB sing 522 n n 
CBB HBB3 HEB sing 523 n n 
NC C1C HEB sing 524 n y 
NC C4C HEB sing 525 n y 
C1C C2C HEB doub 526 n y 
C2C C3C HEB sing 527 n y 
C2C CMC HEB sing 528 n n 
C3C C4C HEB doub 529 n y 
C3C CAC HEB sing 530 n n 
CMC HMC1 HEB sing 531 n n 
CMC HMC2 HEB sing 532 n n 
CMC HMC3 HEB sing 533 n n 
CAC CBC HEB doub 534 n n 
CAC HAC HEB sing 535 n n 
CBC HBC1 HEB sing 536 n n 
CBC HBC2 HEB sing 537 n n 
ND C1D HEB sing 538 n n 
ND C4D HEB doub 539 n n 
C1D C2D HEB sing 540 n n 
C2D C3D HEB doub 541 n n 
C2D CMD HEB sing 542 n n 
C3D C4D HEB sing 543 n n 
C3D CAD HEB sing 544 n n 
CMD HMD1 HEB sing 545 n n 
CMD HMD2 HEB sing 546 n n 
CMD HMD3 HEB sing 547 n n 
CAD CBD HEB sing 548 n n 
CAD HAD1 HEB sing 549 n n 
CAD HAD2 HEB sing 550 n n 
CBD CGD HEB sing 551 n n 
CBD HBD1 HEB sing 552 n n 
CBD HBD2 HEB sing 553 n n 
CGD O1D HEB doub 554 n n 
CGD O2D HEB sing 555 n n 
O2D H2D HEB sing 556 n n 
#
_atom_sites.entry_id                     2ACZ 
_atom_sites.fract_transf_matrix[1][1]    0.007207 
_atom_sites.fract_transf_matrix[1][2]    0.004161 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008322 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.001916 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 OAA A 1 589 7 OAA OAA . 
F 6 FAD A 1 601 601 FAD FAD . 
G 7 FES B 1 302 302 FES FES . 
H 8 SF4 B 1 303 303 SF4 FS4 . 
I 9 F3S B 1 304 304 F3S F3S . 
J 10 HEB C 1 130 5 HEB HEB . 
K 11 AT5 C 1 131 1 AT5 AT5 . 
L 12 CDN C 1 132 8 CDN CDN . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 FE FE HEB . . . J 10 74.898 101.051 96.442 1 28.21 ? FE HEB 130 C 1 
HETATM 2 C CHA HEB . . . J 10 75.848 101.123 99.727 1 24.41 ? CHA HEB 130 C 1 
HETATM 3 C CHB HEB . . . J 10 77.802 102.741 95.554 1 22.57 ? CHB HEB 130 C 1 
HETATM 4 C CHC HEB . . . J 10 73.917 100.941 93.229 1 27.73 ? CHC HEB 130 C 1 
HETATM 5 C CHD HEB . . . J 10 71.974 99.323 97.371 1 28.97 ? CHD HEB 130 C 1 
HETATM 6 N NA HEB . . . J 10 76.528 101.773 97.466 1 22.43 ? NA HEB 130 C 1 
HETATM 7 C C1A HEB . . . J 10 76.691 101.678 98.793 1 22.97 ? C1A HEB 130 C 1 
HETATM 8 C C2A HEB . . . J 10 77.953 102.255 99.142 1 25.32 ? C2A HEB 130 C 1 
HETATM 9 C C3A HEB . . . J 10 78.532 102.73 97.979 1 24.64 ? C3A HEB 130 C 1 
HETATM 10 C C4A HEB . . . J 10 77.601 102.423 96.905 1 23.49 ? C4A HEB 130 C 1 
HETATM 11 C CMA HEB . . . J 10 79.878 103.435 97.829 1 22.46 ? CMA HEB 130 C 1 
HETATM 12 C CAA HEB . . . J 10 78.486 102.301 100.553 1 30.6 ? CAA HEB 130 C 1 
HETATM 13 C CBA HEB . . . J 10 79.57 101.245 100.873 1 35.48 ? CBA HEB 130 C 1 
HETATM 14 C CGA HEB . . . J 10 79.439 100.697 102.288 1 40.64 ? CGA HEB 130 C 1 
HETATM 15 O O1A HEB . . . J 10 79.111 99.49 102.412 1 44.73 ? O1A HEB 130 C 1 
HETATM 16 O O2A HEB . . . J 10 79.681 101.493 103.215 1 38.57 ? O2A HEB 130 C 1 
HETATM 17 N NB HEB . . . J 10 75.692 101.735 94.715 1 26.74 ? NB HEB 130 C 1 
HETATM 18 C C1B HEB . . . J 10 76.891 102.41 94.557 1 26.5 ? C1B HEB 130 C 1 
HETATM 19 C C2B HEB . . . J 10 77.041 102.721 93.132 1 26.71 ? C2B HEB 130 C 1 
HETATM 20 C C3B HEB . . . J 10 75.933 102.204 92.49 1 29.64 ? C3B HEB 130 C 1 
HETATM 21 C C4B HEB . . . J 10 75.1 101.576 93.509 1 28.53 ? C4B HEB 130 C 1 
HETATM 22 C CMB HEB . . . J 10 78.19 103.454 92.493 1 25.94 ? CMB HEB 130 C 1 
HETATM 23 C CAB HEB . . . J 10 75.594 102.232 91.009 1 32.83 ? CAB HEB 130 C 1 
HETATM 24 C CBB HEB . . . J 10 74.796 103.424 90.562 1 39.94 ? CBB HEB 130 C 1 
HETATM 25 N NC HEB . . . J 10 73.267 100.26 95.487 1 25.67 ? NC HEB 130 C 1 
HETATM 26 C C1C HEB . . . J 10 73.103 100.339 94.15 1 28.94 ? C1C HEB 130 C 1 
HETATM 27 C C2C HEB . . . J 10 71.874 99.679 93.764 1 30.89 ? C2C HEB 130 C 1 
HETATM 28 C C3C HEB . . . J 10 71.329 99.227 94.947 1 32.12 ? C3C HEB 130 C 1 
HETATM 29 C C4C HEB . . . J 10 72.205 99.598 96.03 1 29.2 ? C4C HEB 130 C 1 
HETATM 30 C CMC HEB . . . J 10 71.355 99.558 92.329 1 29.21 ? CMC HEB 130 C 1 
HETATM 31 C CAC HEB . . . J 10 70.011 98.471 95.093 1 36.68 ? CAC HEB 130 C 1 
HETATM 32 C CBC HEB . . . J 10 69.872 97.213 94.64 1 42.05 ? CBC HEB 130 C 1 
HETATM 33 N ND HEB . . . J 10 74.05 100.37 98.237 1 26.7 ? ND HEB 130 C 1 
HETATM 34 C C1D HEB . . . J 10 72.854 99.704 98.381 1 27.26 ? C1D HEB 130 C 1 
HETATM 35 C C2D HEB . . . J 10 72.654 99.454 99.797 1 24.35 ? C2D HEB 130 C 1 
HETATM 36 C C3D HEB . . . J 10 73.738 99.967 100.478 1 26.48 ? C3D HEB 130 C 1 
HETATM 37 C C4D HEB . . . J 10 74.631 100.536 99.461 1 26.94 ? C4D HEB 130 C 1 
HETATM 38 C CMD HEB . . . J 10 71.479 98.76 100.427 1 22.17 ? CMD HEB 130 C 1 
HETATM 39 C CAD HEB . . . J 10 73.912 99.922 102.001 1 29.96 ? CAD HEB 130 C 1 
HETATM 40 C CBD HEB . . . J 10 75.311 99.703 102.593 1 38.86 ? CBD HEB 130 C 1 
HETATM 41 C CGD HEB . . . J 10 75.312 99.727 104.139 1 43.96 ? CGD HEB 130 C 1 
HETATM 42 O O1D HEB . . . J 10 74.218 99.895 104.73 1 42.92 ? O1D HEB 130 C 1 
HETATM 43 O O2D HEB . . . J 10 76.417 99.563 104.703 1 46.67 ? O2D HEB 130 C 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           337 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           43 
#