data_2AD5 # _model_server_result.job_id J6Ft7AAexV4RTTKCZpAO_A _model_server_result.datetime_utc '2024-11-22 12:59:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ad5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 2AD5 # _exptl.entry_id 2AD5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2AD5 _cell.length_a 163.27 _cell.length_b 106.38 _cell.length_c 130.47 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2AD5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PQS dimeric 2 software_defined_assembly 2 PQS dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J 1 1,2 A,C,D,E,I 2 1,2 B,F,G,H,J 3 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 261 A CYS 261 1_555 A SG CYS 268 A CYS 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf2 B SG CYS 261 B CYS 261 1_555 B SG CYS 268 B CYS 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc1 A OD2 ASP 72 A ASP 72 1_555 C MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc2 A OE2 GLU 140 A GLU 140 1_555 C MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? metalc ? metalc3 D O1B ADP . A ADP 601 1_555 C MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc4 B OD2 ASP 72 B ASP 72 1_555 F MG MG . B MG 1701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? metalc ? metalc5 B OE2 GLU 140 B GLU 140 1_555 F MG MG . B MG 1701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.914 ? metalc ? metalc6 G O1B ADP . B ADP 1601 1_555 F MG MG . B MG 1701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2AD5 _atom_sites.fract_transf_matrix[1][1] 0.006125 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0094 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007665 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 701 701 MG MG . D 3 ADP A 1 601 601 ADP ADP . E 4 CTP A 1 602 602 CTP CTP . F 2 MG B 1 1701 1701 MG MG . G 3 ADP B 1 1601 1601 ADP ADP . H 4 CTP B 1 1602 1602 CTP CTP . I 5 HOH A 1 702 1 HOH HOH . I 5 HOH A 2 703 2 HOH HOH . I 5 HOH A 3 704 3 HOH HOH . I 5 HOH A 4 705 4 HOH HOH . I 5 HOH A 5 706 5 HOH HOH . I 5 HOH A 6 707 6 HOH HOH . I 5 HOH A 7 708 7 HOH HOH . I 5 HOH A 8 709 8 HOH HOH . I 5 HOH A 9 710 9 HOH HOH . I 5 HOH A 10 711 10 HOH HOH . I 5 HOH A 11 712 11 HOH HOH . I 5 HOH A 12 713 12 HOH HOH . I 5 HOH A 13 714 13 HOH HOH . I 5 HOH A 14 715 14 HOH HOH . I 5 HOH A 15 716 15 HOH HOH . I 5 HOH A 16 717 16 HOH HOH . I 5 HOH A 17 718 23 HOH HOH . I 5 HOH A 18 719 24 HOH HOH . I 5 HOH A 19 720 25 HOH HOH . I 5 HOH A 20 721 26 HOH HOH . I 5 HOH A 21 722 27 HOH HOH . I 5 HOH A 22 723 28 HOH HOH . I 5 HOH A 23 724 29 HOH HOH . I 5 HOH A 24 725 30 HOH HOH . I 5 HOH A 25 726 31 HOH HOH . I 5 HOH A 26 727 32 HOH HOH . I 5 HOH A 27 728 33 HOH HOH . I 5 HOH A 28 729 34 HOH HOH . I 5 HOH A 29 730 35 HOH HOH . I 5 HOH A 30 731 36 HOH HOH . I 5 HOH A 31 732 37 HOH HOH . I 5 HOH A 32 733 38 HOH HOH . I 5 HOH A 33 734 39 HOH HOH . I 5 HOH A 34 735 40 HOH HOH . I 5 HOH A 35 736 41 HOH HOH . I 5 HOH A 36 737 42 HOH HOH . I 5 HOH A 37 738 43 HOH HOH . I 5 HOH A 38 739 44 HOH HOH . I 5 HOH A 39 740 45 HOH HOH . I 5 HOH A 40 741 54 HOH HOH . I 5 HOH A 41 742 55 HOH HOH . I 5 HOH A 42 743 83 HOH HOH . I 5 HOH A 43 744 86 HOH HOH . I 5 HOH A 44 745 89 HOH HOH . I 5 HOH A 45 746 90 HOH HOH . I 5 HOH A 46 747 96 HOH HOH . I 5 HOH A 47 748 97 HOH HOH . I 5 HOH A 48 749 98 HOH HOH . I 5 HOH A 49 750 99 HOH HOH . I 5 HOH A 50 751 100 HOH HOH . I 5 HOH A 51 752 101 HOH HOH . I 5 HOH A 52 753 102 HOH HOH . I 5 HOH A 53 754 103 HOH HOH . I 5 HOH A 54 755 104 HOH HOH . I 5 HOH A 55 756 105 HOH HOH . I 5 HOH A 56 757 106 HOH HOH . I 5 HOH A 57 758 107 HOH HOH . I 5 HOH A 58 759 110 HOH HOH . I 5 HOH A 59 760 113 HOH HOH . I 5 HOH A 60 761 114 HOH HOH . I 5 HOH A 61 762 120 HOH HOH . I 5 HOH A 62 763 121 HOH HOH . I 5 HOH A 63 764 122 HOH HOH . I 5 HOH A 64 765 123 HOH HOH . I 5 HOH A 65 766 124 HOH HOH . I 5 HOH A 66 767 125 HOH HOH . I 5 HOH A 67 768 126 HOH HOH . I 5 HOH A 68 769 127 HOH HOH . I 5 HOH A 69 770 128 HOH HOH . I 5 HOH A 70 771 129 HOH HOH . I 5 HOH A 71 772 130 HOH HOH . I 5 HOH A 72 773 131 HOH HOH . I 5 HOH A 73 774 132 HOH HOH . I 5 HOH A 74 775 133 HOH HOH . I 5 HOH A 75 776 134 HOH HOH . I 5 HOH A 76 777 135 HOH HOH . I 5 HOH A 77 778 136 HOH HOH . I 5 HOH A 78 779 137 HOH HOH . I 5 HOH A 79 780 138 HOH HOH . I 5 HOH A 80 781 139 HOH HOH . I 5 HOH A 81 782 140 HOH HOH . I 5 HOH A 82 783 154 HOH HOH . I 5 HOH A 83 784 156 HOH HOH . I 5 HOH A 84 785 163 HOH HOH . I 5 HOH A 85 786 164 HOH HOH . I 5 HOH A 86 787 167 HOH HOH . I 5 HOH A 87 788 168 HOH HOH . I 5 HOH A 88 789 172 HOH HOH . I 5 HOH A 89 790 173 HOH HOH . I 5 HOH A 90 791 174 HOH HOH . I 5 HOH A 91 792 175 HOH HOH . I 5 HOH A 92 793 176 HOH HOH . I 5 HOH A 93 794 177 HOH HOH . I 5 HOH A 94 795 178 HOH HOH . I 5 HOH A 95 796 179 HOH HOH . I 5 HOH A 96 797 180 HOH HOH . I 5 HOH A 97 798 181 HOH HOH . I 5 HOH A 98 799 182 HOH HOH . I 5 HOH A 99 800 183 HOH HOH . I 5 HOH A 100 801 185 HOH HOH . I 5 HOH A 101 802 186 HOH HOH . I 5 HOH A 102 803 197 HOH HOH . I 5 HOH A 103 804 198 HOH HOH . I 5 HOH A 104 805 200 HOH HOH . I 5 HOH A 105 806 205 HOH HOH . I 5 HOH A 106 807 206 HOH HOH . I 5 HOH A 107 808 207 HOH HOH . I 5 HOH A 108 809 212 HOH HOH . I 5 HOH A 109 810 213 HOH HOH . I 5 HOH A 110 811 214 HOH HOH . I 5 HOH A 111 812 215 HOH HOH . I 5 HOH A 112 813 216 HOH HOH . I 5 HOH A 113 814 217 HOH HOH . I 5 HOH A 114 815 219 HOH HOH . I 5 HOH A 115 816 221 HOH HOH . I 5 HOH A 116 817 222 HOH HOH . I 5 HOH A 117 818 223 HOH HOH . I 5 HOH A 118 819 224 HOH HOH . I 5 HOH A 119 820 225 HOH HOH . I 5 HOH A 120 821 226 HOH HOH . I 5 HOH A 121 822 227 HOH HOH . I 5 HOH A 122 823 231 HOH HOH . I 5 HOH A 123 824 232 HOH HOH . I 5 HOH A 124 825 233 HOH HOH . I 5 HOH A 125 826 245 HOH HOH . I 5 HOH A 126 827 247 HOH HOH . I 5 HOH A 127 828 248 HOH HOH . I 5 HOH A 128 829 249 HOH HOH . I 5 HOH A 129 830 250 HOH HOH . I 5 HOH A 130 831 251 HOH HOH . J 5 HOH B 1 1702 17 HOH HOH . J 5 HOH B 2 1703 18 HOH HOH . J 5 HOH B 3 1704 19 HOH HOH . J 5 HOH B 4 1705 20 HOH HOH . J 5 HOH B 5 1706 21 HOH HOH . J 5 HOH B 6 1707 22 HOH HOH . J 5 HOH B 7 1708 46 HOH HOH . J 5 HOH B 8 1709 47 HOH HOH . J 5 HOH B 9 1710 48 HOH HOH . J 5 HOH B 10 1711 49 HOH HOH . J 5 HOH B 11 1712 50 HOH HOH . J 5 HOH B 12 1713 51 HOH HOH . J 5 HOH B 13 1714 52 HOH HOH . J 5 HOH B 14 1715 53 HOH HOH . J 5 HOH B 15 1716 56 HOH HOH . J 5 HOH B 16 1717 57 HOH HOH . J 5 HOH B 17 1718 58 HOH HOH . J 5 HOH B 18 1719 59 HOH HOH . J 5 HOH B 19 1720 60 HOH HOH . J 5 HOH B 20 1721 61 HOH HOH . J 5 HOH B 21 1722 62 HOH HOH . J 5 HOH B 22 1723 63 HOH HOH . J 5 HOH B 23 1724 64 HOH HOH . J 5 HOH B 24 1725 65 HOH HOH . J 5 HOH B 25 1726 66 HOH HOH . J 5 HOH B 26 1727 67 HOH HOH . J 5 HOH B 27 1728 68 HOH HOH . J 5 HOH B 28 1729 69 HOH HOH . J 5 HOH B 29 1730 70 HOH HOH . J 5 HOH B 30 1731 71 HOH HOH . J 5 HOH B 31 1732 72 HOH HOH . J 5 HOH B 32 1733 73 HOH HOH . J 5 HOH B 33 1734 74 HOH HOH . J 5 HOH B 34 1735 75 HOH HOH . J 5 HOH B 35 1736 76 HOH HOH . J 5 HOH B 36 1737 77 HOH HOH . J 5 HOH B 37 1738 78 HOH HOH . J 5 HOH B 38 1739 79 HOH HOH . J 5 HOH B 39 1740 80 HOH HOH . J 5 HOH B 40 1741 81 HOH HOH . J 5 HOH B 41 1742 82 HOH HOH . J 5 HOH B 42 1743 84 HOH HOH . J 5 HOH B 43 1744 85 HOH HOH . J 5 HOH B 44 1745 87 HOH HOH . J 5 HOH B 45 1746 88 HOH HOH . J 5 HOH B 46 1747 91 HOH HOH . J 5 HOH B 47 1748 92 HOH HOH . J 5 HOH B 48 1749 93 HOH HOH . J 5 HOH B 49 1750 94 HOH HOH . J 5 HOH B 50 1751 95 HOH HOH . J 5 HOH B 51 1752 108 HOH HOH . J 5 HOH B 52 1753 109 HOH HOH . J 5 HOH B 53 1754 111 HOH HOH . J 5 HOH B 54 1755 112 HOH HOH . J 5 HOH B 55 1756 115 HOH HOH . J 5 HOH B 56 1757 116 HOH HOH . J 5 HOH B 57 1758 117 HOH HOH . J 5 HOH B 58 1759 118 HOH HOH . J 5 HOH B 59 1760 119 HOH HOH . J 5 HOH B 60 1761 141 HOH HOH . J 5 HOH B 61 1762 142 HOH HOH . J 5 HOH B 62 1763 143 HOH HOH . J 5 HOH B 63 1764 144 HOH HOH . J 5 HOH B 64 1765 145 HOH HOH . J 5 HOH B 65 1766 146 HOH HOH . J 5 HOH B 66 1767 147 HOH HOH . J 5 HOH B 67 1768 148 HOH HOH . J 5 HOH B 68 1769 149 HOH HOH . J 5 HOH B 69 1770 150 HOH HOH . J 5 HOH B 70 1771 151 HOH HOH . J 5 HOH B 71 1772 152 HOH HOH . J 5 HOH B 72 1773 153 HOH HOH . J 5 HOH B 73 1774 155 HOH HOH . J 5 HOH B 74 1775 157 HOH HOH . J 5 HOH B 75 1776 158 HOH HOH . J 5 HOH B 76 1777 159 HOH HOH . J 5 HOH B 77 1778 160 HOH HOH . J 5 HOH B 78 1779 161 HOH HOH . J 5 HOH B 79 1780 162 HOH HOH . J 5 HOH B 80 1781 165 HOH HOH . J 5 HOH B 81 1782 166 HOH HOH . J 5 HOH B 82 1783 169 HOH HOH . J 5 HOH B 83 1784 170 HOH HOH . J 5 HOH B 84 1785 171 HOH HOH . J 5 HOH B 85 1786 184 HOH HOH . J 5 HOH B 86 1787 187 HOH HOH . J 5 HOH B 87 1788 188 HOH HOH . J 5 HOH B 88 1789 189 HOH HOH . J 5 HOH B 89 1790 190 HOH HOH . J 5 HOH B 90 1791 191 HOH HOH . J 5 HOH B 91 1792 192 HOH HOH . J 5 HOH B 92 1793 193 HOH HOH . J 5 HOH B 93 1794 194 HOH HOH . J 5 HOH B 94 1795 195 HOH HOH . J 5 HOH B 95 1796 196 HOH HOH . J 5 HOH B 96 1797 199 HOH HOH . J 5 HOH B 97 1798 201 HOH HOH . J 5 HOH B 98 1799 202 HOH HOH . J 5 HOH B 99 1800 203 HOH HOH . J 5 HOH B 100 1801 204 HOH HOH . J 5 HOH B 101 1802 208 HOH HOH . J 5 HOH B 102 1803 209 HOH HOH . J 5 HOH B 103 1804 210 HOH HOH . J 5 HOH B 104 1805 211 HOH HOH . J 5 HOH B 105 1806 218 HOH HOH . J 5 HOH B 106 1807 220 HOH HOH . J 5 HOH B 107 1808 228 HOH HOH . J 5 HOH B 108 1809 229 HOH HOH . J 5 HOH B 109 1810 230 HOH HOH . J 5 HOH B 110 1811 234 HOH HOH . J 5 HOH B 111 1812 235 HOH HOH . J 5 HOH B 112 1813 236 HOH HOH . J 5 HOH B 113 1814 237 HOH HOH . J 5 HOH B 114 1815 238 HOH HOH . J 5 HOH B 115 1816 239 HOH HOH . J 5 HOH B 116 1817 240 HOH HOH . J 5 HOH B 117 1818 241 HOH HOH . J 5 HOH B 118 1819 242 HOH HOH . J 5 HOH B 119 1820 243 HOH HOH . J 5 HOH B 120 1821 244 HOH HOH . J 5 HOH B 121 1822 246 HOH HOH . J 5 HOH B 122 1823 252 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 17.308 _atom_site.Cartn_y 10.006 _atom_site.Cartn_z 19.191 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 32.84 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 701 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #