data_2ADM
#
_model_server_result.job_id            XDhfGHEemaYRPnWpge0wCQ 
_model_server_result.datetime_utc      '2025-01-03 00:35:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2adm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":500}' 
#
_entry.id    2ADM 
#
_exptl.entry_id    2ADM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              398.437 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            S-ADENOSYLMETHIONINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2ADM 
_cell.length_a            130.66 
_cell.length_b            141.83 
_cell.length_c            53.15 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2ADM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C15 H22 N6 O5 S' 
_chem_comp.formula_weight    398.437 
_chem_comp.id                SAM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              S-ADENOSYLMETHIONINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA SAM sing 277 n n 
N HN1 SAM sing 278 n n 
N HN2 SAM sing 279 n n 
CA C SAM sing 280 n n 
CA CB SAM sing 281 n n 
CA HA SAM sing 282 n n 
C O SAM doub 283 n n 
C OXT SAM sing 284 n n 
CB CG SAM sing 285 n n 
CB HB1 SAM sing 286 n n 
CB HB2 SAM sing 287 n n 
CG SD SAM sing 288 n n 
CG HG1 SAM sing 289 n n 
CG HG2 SAM sing 290 n n 
SD CE SAM sing 291 n n 
SD C5' SAM sing 292 n n 
CE HE1 SAM sing 293 n n 
CE HE2 SAM sing 294 n n 
CE HE3 SAM sing 295 n n 
C5' C4' SAM sing 296 n n 
C5' "H5'1" SAM sing 297 n n 
C5' "H5'2" SAM sing 298 n n 
C4' O4' SAM sing 299 n n 
C4' C3' SAM sing 300 n n 
C4' H4' SAM sing 301 n n 
O4' C1' SAM sing 302 n n 
C3' O3' SAM sing 303 n n 
C3' C2' SAM sing 304 n n 
C3' H3' SAM sing 305 n n 
O3' HO3' SAM sing 306 n n 
C2' O2' SAM sing 307 n n 
C2' C1' SAM sing 308 n n 
C2' H2' SAM sing 309 n n 
O2' HO2' SAM sing 310 n n 
C1' N9 SAM sing 311 n n 
C1' H1' SAM sing 312 n n 
N9 C8 SAM sing 313 n y 
N9 C4 SAM sing 314 n y 
C8 N7 SAM doub 315 n y 
C8 H8 SAM sing 316 n n 
N7 C5 SAM sing 317 n y 
C5 C6 SAM sing 318 n y 
C5 C4 SAM doub 319 n y 
C6 N6 SAM sing 320 n n 
C6 N1 SAM doub 321 n y 
N6 HN61 SAM sing 322 n n 
N6 HN62 SAM sing 323 n n 
N1 C2 SAM sing 324 n y 
C2 N3 SAM doub 325 n y 
C2 H2 SAM sing 326 n n 
N3 C4 SAM sing 327 n y 
#
_atom_sites.entry_id                     2ADM 
_atom_sites.fract_transf_matrix[1][1]    0.007653 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007051 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018815 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SAM A 1 500 500 SAM SAM . 
D 2 SAM B 1 500 500 SAM SAM . 
E 3 HOH A 1 1600 1600 HOH HOH . 
E 3 HOH A 2 1601 1601 HOH HOH . 
E 3 HOH A 3 1602 1602 HOH HOH . 
E 3 HOH A 4 1603 1603 HOH HOH . 
E 3 HOH A 5 1605 1605 HOH HOH . 
E 3 HOH A 6 1607 1607 HOH HOH . 
E 3 HOH A 7 1608 1608 HOH HOH . 
E 3 HOH A 8 1612 1612 HOH HOH . 
E 3 HOH A 9 1614 1614 HOH HOH . 
E 3 HOH A 10 1615 1615 HOH HOH . 
E 3 HOH A 11 1618 1618 HOH HOH . 
E 3 HOH A 12 1620 1620 HOH HOH . 
E 3 HOH A 13 1622 1622 HOH HOH . 
E 3 HOH A 14 1624 1624 HOH HOH . 
E 3 HOH A 15 1627 1627 HOH HOH . 
E 3 HOH A 16 1628 1628 HOH HOH . 
E 3 HOH A 17 1630 1630 HOH HOH . 
E 3 HOH A 18 1632 1632 HOH HOH . 
E 3 HOH A 19 1635 1635 HOH HOH . 
E 3 HOH A 20 1636 1636 HOH HOH . 
E 3 HOH A 21 1637 1637 HOH HOH . 
E 3 HOH A 22 1638 1638 HOH HOH . 
E 3 HOH A 23 1639 1639 HOH HOH . 
E 3 HOH A 24 1640 1640 HOH HOH . 
E 3 HOH A 25 1643 1643 HOH HOH . 
E 3 HOH A 26 1644 1644 HOH HOH . 
E 3 HOH A 27 1647 1647 HOH HOH . 
E 3 HOH A 28 1648 1648 HOH HOH . 
E 3 HOH A 29 1649 1649 HOH HOH . 
E 3 HOH A 30 1652 1652 HOH HOH . 
E 3 HOH A 31 1653 1653 HOH HOH . 
E 3 HOH A 32 1654 1654 HOH HOH . 
E 3 HOH A 33 1661 1661 HOH HOH . 
E 3 HOH A 34 1665 1665 HOH HOH . 
E 3 HOH A 35 1671 1671 HOH HOH . 
E 3 HOH A 36 1675 1675 HOH HOH . 
E 3 HOH A 37 1676 1676 HOH HOH . 
E 3 HOH A 38 1678 1678 HOH HOH . 
E 3 HOH A 39 1679 1679 HOH HOH . 
E 3 HOH A 40 1680 1680 HOH HOH . 
E 3 HOH A 41 1682 1682 HOH HOH . 
E 3 HOH A 42 1683 1683 HOH HOH . 
E 3 HOH A 43 1684 1684 HOH HOH . 
E 3 HOH A 44 1685 1685 HOH HOH . 
E 3 HOH A 45 1688 1688 HOH HOH . 
E 3 HOH A 46 1690 1690 HOH HOH . 
E 3 HOH A 47 1691 1691 HOH HOH . 
F 3 HOH B 1 1604 1604 HOH HOH . 
F 3 HOH B 2 1606 1606 HOH HOH . 
F 3 HOH B 3 1609 1609 HOH HOH . 
F 3 HOH B 4 1610 1610 HOH HOH . 
F 3 HOH B 5 1611 1611 HOH HOH . 
F 3 HOH B 6 1613 1613 HOH HOH . 
F 3 HOH B 7 1616 1616 HOH HOH . 
F 3 HOH B 8 1617 1617 HOH HOH . 
F 3 HOH B 9 1619 1619 HOH HOH . 
F 3 HOH B 10 1621 1621 HOH HOH . 
F 3 HOH B 11 1623 1623 HOH HOH . 
F 3 HOH B 12 1625 1625 HOH HOH . 
F 3 HOH B 13 1626 1626 HOH HOH . 
F 3 HOH B 14 1629 1629 HOH HOH . 
F 3 HOH B 15 1631 1631 HOH HOH . 
F 3 HOH B 16 1633 1633 HOH HOH . 
F 3 HOH B 17 1634 1634 HOH HOH . 
F 3 HOH B 18 1641 1641 HOH HOH . 
F 3 HOH B 19 1642 1642 HOH HOH . 
F 3 HOH B 20 1645 1645 HOH HOH . 
F 3 HOH B 21 1646 1646 HOH HOH . 
F 3 HOH B 22 1650 1650 HOH HOH . 
F 3 HOH B 23 1651 1651 HOH HOH . 
F 3 HOH B 24 1655 1655 HOH HOH . 
F 3 HOH B 25 1656 1656 HOH HOH . 
F 3 HOH B 26 1657 1657 HOH HOH . 
F 3 HOH B 27 1658 1658 HOH HOH . 
F 3 HOH B 28 1659 1659 HOH HOH . 
F 3 HOH B 29 1660 1660 HOH HOH . 
F 3 HOH B 30 1662 1662 HOH HOH . 
F 3 HOH B 31 1663 1663 HOH HOH . 
F 3 HOH B 32 1664 1664 HOH HOH . 
F 3 HOH B 33 1666 1666 HOH HOH . 
F 3 HOH B 34 1667 1667 HOH HOH . 
F 3 HOH B 35 1668 1668 HOH HOH . 
F 3 HOH B 36 1669 1669 HOH HOH . 
F 3 HOH B 37 1670 1670 HOH HOH . 
F 3 HOH B 38 1672 1672 HOH HOH . 
F 3 HOH B 39 1673 1673 HOH HOH . 
F 3 HOH B 40 1674 1674 HOH HOH . 
F 3 HOH B 41 1677 1677 HOH HOH . 
F 3 HOH B 42 1681 1681 HOH HOH . 
F 3 HOH B 43 1686 1686 HOH HOH . 
F 3 HOH B 44 1687 1687 HOH HOH . 
F 3 HOH B 45 1689 1689 HOH HOH . 
F 3 HOH B 46 1692 1692 HOH HOH . 
F 3 HOH B 47 1693 1693 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N SAM . . . D 2 2.432 34.575 46.075 1 72.92 ? N SAM 500 B 1 
HETATM 2 C CA SAM . . . D 2 3.006 34.086 44.824 1 75.34 ? CA SAM 500 B 1 
HETATM 3 C C SAM . . . D 2 4.516 33.817 44.928 1 76.06 ? C SAM 500 B 1 
HETATM 4 O O SAM . . . D 2 5.106 34.146 45.981 1 73.6 ? O SAM 500 B 1 
HETATM 5 O OXT SAM . . . D 2 5.094 33.278 43.956 1 78.33 ? OXT SAM 500 B 1 
HETATM 6 C CB SAM . . . D 2 2.713 35.066 43.676 1 72.21 ? CB SAM 500 B 1 
HETATM 7 C CG SAM . . . D 2 2.809 36.541 44.057 1 70.56 ? CG SAM 500 B 1 
HETATM 8 S SD SAM . . . D 2 2.78 37.613 42.611 1 73.89 ? SD SAM 500 B 1 
HETATM 9 C CE SAM . . . D 2 4.013 38.814 43.047 1 68.22 ? CE SAM 500 B 1 
HETATM 10 C C5' SAM . . . D 2 1.203 38.468 42.593 1 67.05 ? C5' SAM 500 B 1 
HETATM 11 C C4' SAM . . . D 2 0.018 37.554 42.309 1 66.35 ? C4' SAM 500 B 1 
HETATM 12 O O4' SAM . . . D 2 -1.188 38.096 42.871 1 64.27 ? O4' SAM 500 B 1 
HETATM 13 C C3' SAM . . . D 2 -0.188 37.378 40.821 1 67.21 ? C3' SAM 500 B 1 
HETATM 14 O O3' SAM . . . D 2 0.095 36.023 40.439 1 69.38 ? O3' SAM 500 B 1 
HETATM 15 C C2' SAM . . . D 2 -1.638 37.728 40.555 1 63.87 ? C2' SAM 500 B 1 
HETATM 16 O O2' SAM . . . D 2 -2.385 36.55 40.223 1 67.48 ? O2' SAM 500 B 1 
HETATM 17 C C1' SAM . . . D 2 -2.165 38.327 41.845 1 58.44 ? C1' SAM 500 B 1 
HETATM 18 N N9 SAM . . . D 2 -2.409 39.778 41.695 1 48.3 ? N9 SAM 500 B 1 
HETATM 19 C C8 SAM . . . D 2 -1.894 40.648 40.793 1 42.73 ? C8 SAM 500 B 1 
HETATM 20 N N7 SAM . . . D 2 -2.297 41.869 40.861 1 39.74 ? N7 SAM 500 B 1 
HETATM 21 C C5 SAM . . . D 2 -3.189 41.828 41.936 1 38.06 ? C5 SAM 500 B 1 
HETATM 22 C C6 SAM . . . D 2 -4.082 42.779 42.461 1 38.71 ? C6 SAM 500 B 1 
HETATM 23 N N6 SAM . . . D 2 -4.119 44.047 42.038 1 40.56 ? N6 SAM 500 B 1 
HETATM 24 N N1 SAM . . . D 2 -4.929 42.368 43.431 1 37.57 ? N1 SAM 500 B 1 
HETATM 25 C C2 SAM . . . D 2 -4.888 41.102 43.836 1 29.91 ? C2 SAM 500 B 1 
HETATM 26 N N3 SAM . . . D 2 -4.102 40.116 43.424 1 38.38 ? N3 SAM 500 B 1 
HETATM 27 C C4 SAM . . . D 2 -3.263 40.552 42.453 1 40.73 ? C4 SAM 500 B 1 
#
_model_server_stats.io_time_ms              60 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           27 
#