data_2AEK # _model_server_result.job_id e3KnZvNdHPc-ZXtW_twv5w _model_server_result.datetime_utc '2025-05-21 02:32:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2aek # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":804}' # _entry.id 2AEK # _exptl.entry_id 2AEK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2AEK _cell.length_a 122.28 _cell.length_b 122.28 _cell.length_c 151.5 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2AEK _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 A,C,D,E,I 3 1 B,F,G,H,J 3 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_655 -x+1,-x+y,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 122.28 0 50.5 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 239 A ASP 239 1_555 C MG MG . A MG 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.936 ? metalc ? metalc2 A OD2 ASP 239 A ASP 239 1_555 C MG MG . A MG 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.65 ? metalc ? metalc3 A O ILE 241 A ILE 241 1_555 C MG MG . A MG 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.618 ? metalc ? metalc4 C MG MG . A MG 804 1_555 I O HOH . A HOH 825 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc5 B O ASP 100 B ASP 100 1_555 F MG MG . B MG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? metalc ? metalc6 B OD1 ASP 100 B ASP 100 1_555 F MG MG . B MG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? metalc ? metalc7 B OE1 GLU 164 B GLU 164 1_555 F MG MG . B MG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.838 ? metalc ? metalc8 F MG MG . B MG 803 1_555 J O HOH . B HOH 816 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.832 ? metalc ? metalc9 F MG MG . B MG 803 1_555 J O HOH . B HOH 819 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.596 ? metalc ? metalc10 F MG MG . B MG 803 1_555 J O HOH . B HOH 821 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.952 ? metalc ? metalc11 F MG MG . B MG 803 1_555 J O HOH . B HOH 822 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.936 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2AEK _atom_sites.fract_transf_matrix[1][1] 0.008178 _atom_sites.fract_transf_matrix[1][2] 0.004721 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009443 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006601 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 804 804 MG MG2 . D 3 EDO A 1 700 700 EDO EDO . E 3 EDO A 1 702 702 EDO EDO . F 2 MG B 1 803 803 MG MG2 . G 3 EDO B 1 703 703 EDO EDO . H 3 EDO B 1 701 701 EDO EDO . I 4 HOH A 1 805 2 HOH WAT . I 4 HOH A 2 806 5 HOH WAT . I 4 HOH A 3 807 6 HOH WAT . I 4 HOH A 4 808 8 HOH WAT . I 4 HOH A 5 809 9 HOH WAT . I 4 HOH A 6 810 10 HOH WAT . I 4 HOH A 7 811 11 HOH WAT . I 4 HOH A 8 812 12 HOH WAT . I 4 HOH A 9 813 13 HOH WAT . I 4 HOH A 10 814 14 HOH WAT . I 4 HOH A 11 815 15 HOH WAT . I 4 HOH A 12 816 16 HOH WAT . I 4 HOH A 13 817 17 HOH WAT . I 4 HOH A 14 818 18 HOH WAT . I 4 HOH A 15 819 19 HOH WAT . I 4 HOH A 16 820 20 HOH WAT . I 4 HOH A 17 821 21 HOH WAT . I 4 HOH A 18 822 22 HOH WAT . I 4 HOH A 19 823 23 HOH WAT . I 4 HOH A 20 824 24 HOH WAT . I 4 HOH A 21 825 35 HOH WAT . I 4 HOH A 22 826 36 HOH WAT . I 4 HOH A 23 827 38 HOH WAT . J 4 HOH B 1 804 1 HOH WAT . J 4 HOH B 2 805 3 HOH WAT . J 4 HOH B 3 806 4 HOH WAT . J 4 HOH B 4 807 7 HOH WAT . J 4 HOH B 5 808 25 HOH WAT . J 4 HOH B 6 809 26 HOH WAT . J 4 HOH B 7 810 27 HOH WAT . J 4 HOH B 8 811 28 HOH WAT . J 4 HOH B 9 812 29 HOH WAT . J 4 HOH B 10 813 30 HOH WAT . J 4 HOH B 11 814 31 HOH WAT . J 4 HOH B 12 815 32 HOH WAT . J 4 HOH B 13 816 33 HOH WAT . J 4 HOH B 14 817 34 HOH WAT . J 4 HOH B 15 818 37 HOH WAT . J 4 HOH B 16 819 39 HOH WAT . J 4 HOH B 17 820 40 HOH WAT . J 4 HOH B 18 821 41 HOH WAT . J 4 HOH B 19 822 42 HOH WAT . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 46.543 _atom_site.Cartn_y 61.813 _atom_site.Cartn_z 5.114 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 52.05 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 804 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 338 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #