data_2AEQ
#
_model_server_result.job_id            LfmQuvK2Oy3-GE8-YSffQw 
_model_server_result.datetime_utc      '2024-11-25 10:46:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2aeq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":218}' 
#
_entry.id    2AEQ 
#
_exptl.entry_id    2AEQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              180.156 
_entity.id                          5 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            alpha-D-mannopyranose 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2AEQ 
_cell.length_a            159.753 
_cell.length_b            159.753 
_cell.length_c            104.113 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2AEQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        90 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 4 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dodecameric 
_pdbx_struct_assembly.oligomeric_count      12 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_765 -x+2,-y+1,z -1 0 0 0 -1 0 0 0 1 319.506 159.753 0 
3 'crystal symmetry operation' 3_645 -y+3/2,x-1/2,z 0 -1 0 1 0 0 0 0 1 239.6295 -79.8765 0 
4 'crystal symmetry operation' 4_565 y+1/2,-x+3/2,z 0 1 0 -1 0 0 0 0 1 79.8765 239.6295 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 K N N 
? 5 L N N 
? 5 M N N 
? 5 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 18 A CYS 92 1_555 A SG CYS 343 A CYS 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
disulf ? disulf2 A SG CYS 50 A CYS 124 1_555 A SG CYS 55 A CYS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? 
disulf ? disulf3 A SG CYS 101 A CYS 175 1_555 A SG CYS 119 A CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf4 A SG CYS 109 A CYS 183 1_555 A SG CYS 156 A CYS 230 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf5 A SG CYS 158 A CYS 232 1_555 A SG CYS 163 A CYS 237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? 
disulf ? disulf6 A SG CYS 204 A CYS 278 1_555 A SG CYS 217 A CYS 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf7 A SG CYS 206 A CYS 280 1_555 A SG CYS 215 A CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf8 A SG CYS 244 A CYS 318 1_555 A SG CYS 263 A CYS 337 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf9 A SG CYS 347 A CYS 421 1_555 A SG CYS 373 A CYS 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf10 B SG CYS 23 L CYS 23 1_555 B SG CYS 88 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf11 C SG CYS 22 H CYS 22 1_555 C SG CYS 98 H CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
#
_chem_comp.formula           'C6 H12 O6' 
_chem_comp.formula_weight    180.156 
_chem_comp.id                MAN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              alpha-D-mannopyranose 
_chem_comp.type              'd-saccharide, alpha linking' 
_chem_comp.pdbx_synonyms     alpha-D-mannose;D-mannose;mannose 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MAN sing 216 n n 
C1 O1 MAN sing 217 n n 
C1 O5 MAN sing 218 n n 
C1 H1 MAN sing 219 n n 
C2 C3 MAN sing 220 n n 
C2 O2 MAN sing 221 n n 
C2 H2 MAN sing 222 n n 
C3 C4 MAN sing 223 n n 
C3 O3 MAN sing 224 n n 
C3 H3 MAN sing 225 n n 
C4 C5 MAN sing 226 n n 
C4 O4 MAN sing 227 n n 
C4 H4 MAN sing 228 n n 
C5 C6 MAN sing 229 n n 
C5 O5 MAN sing 230 n n 
C5 H5 MAN sing 231 n n 
C6 O6 MAN sing 232 n n 
C6 H61 MAN sing 233 n n 
C6 H62 MAN sing 234 n n 
O1 HO1 MAN sing 235 n n 
O2 HO2 MAN sing 236 n n 
O3 HO3 MAN sing 237 n n 
O4 HO4 MAN sing 238 n n 
O6 HO6 MAN sing 239 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
MAN DManpa 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
MAN a-D-mannopyranose 'COMMON NAME' GMML 1 
MAN a-D-Manp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
MAN Man 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     2AEQ 
_atom_sites.fract_transf_matrix[1][1]    0.00626 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00626 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009605 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 NAG A 1 501 1 NAG NAG . 
E 4 NAG A 1 1 1 NAG NAG . 
F 4 NAG A 1 2 2 NAG NAG . 
G 4 NAG A 1 502 1 NAG NAG . 
H 4 NAG A 1 503 2 NAG NAG . 
I 4 NAG L 1 215 1 NAG NAG . 
J 4 NAG L 1 216 2 NAG NAG . 
K 5 MAN L 1 217 3 MAN MAN . 
L 5 MAN L 1 218 6 MAN MAN . 
M 5 MAN H 1 218 4 MAN MAN . 
N 5 MAN H 1 219 5 MAN MAN . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MAN . . . L 5 160.786 31.326 50.625 1 32.64 ? C1 MAN 218 L 1 
HETATM 2 C C2 MAN . . . L 5 160.56 31.747 52.08 1 32.64 ? C2 MAN 218 L 1 
HETATM 3 C C3 MAN . . . L 5 160.833 30.554 52.99 1 32.64 ? C3 MAN 218 L 1 
HETATM 4 C C4 MAN . . . L 5 162.249 29.984 52.749 1 32.64 ? C4 MAN 218 L 1 
HETATM 5 C C5 MAN . . . L 5 162.565 29.773 51.246 1 32.64 ? C5 MAN 218 L 1 
HETATM 6 C C6 MAN . . . L 5 161.977 28.519 50.628 1 32.64 ? C6 MAN 218 L 1 
HETATM 7 O O2 MAN . . . L 5 159.224 32.193 52.258 1 32.64 ? O2 MAN 218 L 1 
HETATM 8 O O3 MAN . . . L 5 159.852 29.546 52.761 1 32.64 ? O3 MAN 218 L 1 
HETATM 9 O O4 MAN . . . L 5 163.228 30.841 53.328 1 32.64 ? O4 MAN 218 L 1 
HETATM 10 O O5 MAN . . . L 5 162.159 30.916 50.43 1 32.64 ? O5 MAN 218 L 1 
HETATM 11 O O6 MAN . . . L 5 162.965 27.846 49.856 1 32.64 ? O6 MAN 218 L 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           256 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           11 
#