data_2AGC
#
_model_server_result.job_id            G7P42FIzJf2UhDt41sKdMQ 
_model_server_result.datetime_utc      '2024-11-14 16:24:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2agc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":2057}' 
#
_entry.id    2AGC 
#
_exptl.entry_id    2AGC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              200.318 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'LAURIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2AGC 
_cell.length_a            42.98 
_cell.length_b            51.27 
_cell.length_c            92.44 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2AGC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 8 A CYS 8 1_555 A SG CYS 152 A CYS 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
disulf ? disulf2 A SG CYS 68 A CYS 68 1_555 A SG CYS 75 A CYS 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf3 A SG CYS 81 A CYS 81 1_555 A SG CYS 107 A CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf4 A SG CYS 94 A CYS 94 1_555 A SG CYS 105 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? 
#
_chem_comp.formula           'C12 H24 O2' 
_chem_comp.formula_weight    200.318 
_chem_comp.id                DAO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'LAURIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C1 DAO doub 83 n n 
O2 C1 DAO sing 84 n n 
O2 HO2 DAO sing 85 n n 
C1 C2 DAO sing 86 n n 
C2 C3 DAO sing 87 n n 
C2 H21 DAO sing 88 n n 
C2 H22 DAO sing 89 n n 
C3 C4 DAO sing 90 n n 
C3 H31 DAO sing 91 n n 
C3 H32 DAO sing 92 n n 
C4 C5 DAO sing 93 n n 
C4 H41 DAO sing 94 n n 
C4 H42 DAO sing 95 n n 
C5 C6 DAO sing 96 n n 
C5 H51 DAO sing 97 n n 
C5 H52 DAO sing 98 n n 
C6 C7 DAO sing 99 n n 
C6 H61 DAO sing 100 n n 
C6 H62 DAO sing 101 n n 
C7 C8 DAO sing 102 n n 
C7 H71 DAO sing 103 n n 
C7 H72 DAO sing 104 n n 
C8 C9 DAO sing 105 n n 
C8 H81 DAO sing 106 n n 
C8 H82 DAO sing 107 n n 
C9 C10 DAO sing 108 n n 
C9 H91 DAO sing 109 n n 
C9 H92 DAO sing 110 n n 
C10 C11 DAO sing 111 n n 
C10 H101 DAO sing 112 n n 
C10 H102 DAO sing 113 n n 
C11 C12 DAO sing 114 n n 
C11 H111 DAO sing 115 n n 
C11 H112 DAO sing 116 n n 
C12 H121 DAO sing 117 n n 
C12 H122 DAO sing 118 n n 
C12 H123 DAO sing 119 n n 
#
_atom_sites.entry_id                     2AGC 
_atom_sites.fract_transf_matrix[1][1]    0.023267 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019505 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010818 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MYR A 1 3045 3045 MYR MYR . 
C 3 DAO A 1 2055 2055 DAO DAO . 
D 3 DAO A 1 2057 2057 DAO DAO . 
E 4 HOH A 1 3046 1 HOH TIP . 
E 4 HOH A 2 3047 2 HOH TIP . 
E 4 HOH A 3 3048 3 HOH TIP . 
E 4 HOH A 4 3049 4 HOH TIP . 
E 4 HOH A 5 3050 5 HOH TIP . 
E 4 HOH A 6 3051 6 HOH TIP . 
E 4 HOH A 7 3052 7 HOH TIP . 
E 4 HOH A 8 3053 8 HOH TIP . 
E 4 HOH A 9 3054 9 HOH TIP . 
E 4 HOH A 10 3055 10 HOH TIP . 
E 4 HOH A 11 3056 11 HOH TIP . 
E 4 HOH A 12 3057 12 HOH TIP . 
E 4 HOH A 13 3058 13 HOH TIP . 
E 4 HOH A 14 3059 14 HOH TIP . 
E 4 HOH A 15 3060 15 HOH TIP . 
E 4 HOH A 16 3061 16 HOH TIP . 
E 4 HOH A 17 3062 17 HOH TIP . 
E 4 HOH A 18 3063 18 HOH TIP . 
E 4 HOH A 19 3064 19 HOH TIP . 
E 4 HOH A 20 3065 20 HOH TIP . 
E 4 HOH A 21 3066 21 HOH TIP . 
E 4 HOH A 22 3067 22 HOH TIP . 
E 4 HOH A 23 3068 23 HOH TIP . 
E 4 HOH A 24 3069 24 HOH TIP . 
E 4 HOH A 25 3070 25 HOH TIP . 
E 4 HOH A 26 3071 26 HOH TIP . 
E 4 HOH A 27 3072 27 HOH TIP . 
E 4 HOH A 28 3073 28 HOH TIP . 
E 4 HOH A 29 3074 29 HOH TIP . 
E 4 HOH A 30 3075 30 HOH TIP . 
E 4 HOH A 31 3076 31 HOH TIP . 
E 4 HOH A 32 3077 32 HOH TIP . 
E 4 HOH A 33 3078 33 HOH TIP . 
E 4 HOH A 34 3079 34 HOH TIP . 
E 4 HOH A 35 3080 35 HOH TIP . 
E 4 HOH A 36 3081 36 HOH TIP . 
E 4 HOH A 37 3082 37 HOH TIP . 
E 4 HOH A 38 3083 38 HOH TIP . 
E 4 HOH A 39 3084 39 HOH TIP . 
E 4 HOH A 40 3085 40 HOH TIP . 
E 4 HOH A 41 3086 41 HOH TIP . 
E 4 HOH A 42 3087 42 HOH TIP . 
E 4 HOH A 43 3088 43 HOH TIP . 
E 4 HOH A 44 3089 44 HOH TIP . 
E 4 HOH A 45 3090 45 HOH TIP . 
E 4 HOH A 46 3091 46 HOH TIP . 
E 4 HOH A 47 3092 47 HOH TIP . 
E 4 HOH A 48 3093 48 HOH TIP . 
E 4 HOH A 49 3094 49 HOH TIP . 
E 4 HOH A 50 3095 50 HOH TIP . 
E 4 HOH A 51 3096 51 HOH TIP . 
E 4 HOH A 52 3097 52 HOH TIP . 
E 4 HOH A 53 3098 53 HOH TIP . 
E 4 HOH A 54 3099 54 HOH TIP . 
E 4 HOH A 55 3100 55 HOH TIP . 
E 4 HOH A 56 3101 56 HOH TIP . 
E 4 HOH A 57 3102 57 HOH TIP . 
E 4 HOH A 58 3103 58 HOH TIP . 
E 4 HOH A 59 3104 59 HOH TIP . 
E 4 HOH A 60 3105 60 HOH TIP . 
E 4 HOH A 61 3106 61 HOH TIP . 
E 4 HOH A 62 3107 62 HOH TIP . 
E 4 HOH A 63 3108 63 HOH TIP . 
E 4 HOH A 64 3109 64 HOH TIP . 
E 4 HOH A 65 3110 65 HOH TIP . 
E 4 HOH A 66 3111 66 HOH TIP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 DAO . . . D 3 63.043 8.317 5.513 1 61.85 ? O1 DAO 2057 A 1 
HETATM 2 O O2 DAO . . . D 3 62.52 6.161 5.958 1 68.94 ? O2 DAO 2057 A 1 
HETATM 3 C C1 DAO . . . D 3 62.384 7.181 5.3 1 64.54 ? C1 DAO 2057 A 1 
HETATM 4 C C2 DAO . . . D 3 61.422 7.384 4.114 1 63.94 ? C2 DAO 2057 A 1 
HETATM 5 C C3 DAO . . . D 3 61.472 6.189 3.154 1 62.5 ? C3 DAO 2057 A 1 
HETATM 6 C C4 DAO . . . D 3 60.229 6.027 2.273 1 67.61 ? C4 DAO 2057 A 1 
HETATM 7 C C5 DAO . . . D 3 60.319 4.841 1.325 1 65.48 ? C5 DAO 2057 A 1 
HETATM 8 C C6 DAO . . . D 3 59.068 3.972 1.338 0.2 66.88 ? C6 DAO 2057 A 1 
HETATM 9 C C7 DAO . . . D 3 59.001 2.956 0.207 0.2 67.55 ? C7 DAO 2057 A 1 
HETATM 10 C C8 DAO . . . D 3 59.201 1.5 0.661 0.2 66.82 ? C8 DAO 2057 A 1 
HETATM 11 C C9 DAO . . . D 3 57.904 0.767 0.947 0.2 66 ? C9 DAO 2057 A 1 
HETATM 12 C C10 DAO . . . D 3 58.097 -0.665 1.392 0.8 67.07 ? C10 DAO 2057 A 1 
HETATM 13 C C11 DAO . . . D 3 57.057 -1.161 2.391 0.8 61.61 ? C11 DAO 2057 A 1 
HETATM 14 C C12 DAO . . . D 3 57.286 -2.618 2.818 0.8 62.68 ? C12 DAO 2057 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           357 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           14 
#