data_2AK7 # _model_server_result.job_id nqYMDolMcpSwz_x6zu1Dsg _model_server_result.datetime_utc '2024-11-08 03:53:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ak7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":4397}' # _entry.id 2AK7 # _exptl.entry_id 2AK7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2AK7 _cell.length_a 67.697 _cell.length_b 67.697 _cell.length_c 117.157 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2AK7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 67.697 0 117.157 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LYS 45 A LYS 45 1_555 A N SEP 46 A SEP 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C SEP 46 A SEP 46 1_555 A N ILE 47 A ILE 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 B C LYS 45 B LYS 45 1_555 B N SEP 46 B SEP 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 B C SEP 46 B SEP 46 1_555 B N ILE 47 B ILE 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 274 n n S O2 SO4 doub 275 n n S O3 SO4 sing 276 n n S O4 SO4 sing 277 n n # _atom_sites.entry_id 2AK7 _atom_sites.fract_transf_matrix[1][1] 0.014772 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014772 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008536 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 4396 4396 SO4 SO4 . D 2 SO4 A 1 4397 4397 SO4 SO4 . E 3 HOH A 1 4398 2 HOH HOH . E 3 HOH A 2 4399 3 HOH HOH . E 3 HOH A 3 4400 6 HOH HOH . E 3 HOH A 4 4401 7 HOH HOH . E 3 HOH A 5 4402 8 HOH HOH . E 3 HOH A 6 4403 9 HOH HOH . E 3 HOH A 7 4404 11 HOH HOH . E 3 HOH A 8 4405 12 HOH HOH . E 3 HOH A 9 4406 13 HOH HOH . E 3 HOH A 10 4407 14 HOH HOH . E 3 HOH A 11 4408 16 HOH HOH . E 3 HOH A 12 4409 17 HOH HOH . E 3 HOH A 13 4410 18 HOH HOH . E 3 HOH A 14 4411 19 HOH HOH . E 3 HOH A 15 4412 20 HOH HOH . E 3 HOH A 16 4413 23 HOH HOH . E 3 HOH A 17 4414 25 HOH HOH . E 3 HOH A 18 4415 26 HOH HOH . E 3 HOH A 19 4416 29 HOH HOH . E 3 HOH A 20 4417 30 HOH HOH . E 3 HOH A 21 4418 32 HOH HOH . E 3 HOH A 22 4419 33 HOH HOH . E 3 HOH A 23 4420 34 HOH HOH . E 3 HOH A 24 4421 35 HOH HOH . E 3 HOH A 25 4422 40 HOH HOH . E 3 HOH A 26 4423 42 HOH HOH . E 3 HOH A 27 4424 43 HOH HOH . E 3 HOH A 28 4425 44 HOH HOH . E 3 HOH A 29 4426 45 HOH HOH . E 3 HOH A 30 4427 47 HOH HOH . E 3 HOH A 31 4428 49 HOH HOH . E 3 HOH A 32 4429 50 HOH HOH . E 3 HOH A 33 4430 51 HOH HOH . E 3 HOH A 34 4431 52 HOH HOH . E 3 HOH A 35 4432 53 HOH HOH . E 3 HOH A 36 4433 57 HOH HOH . E 3 HOH A 37 4434 58 HOH HOH . E 3 HOH A 38 4435 59 HOH HOH . E 3 HOH A 39 4436 60 HOH HOH . E 3 HOH A 40 4437 62 HOH HOH . E 3 HOH A 41 4438 63 HOH HOH . E 3 HOH A 42 4439 64 HOH HOH . E 3 HOH A 43 4440 65 HOH HOH . E 3 HOH A 44 4441 66 HOH HOH . E 3 HOH A 45 4442 67 HOH HOH . E 3 HOH A 46 4443 68 HOH HOH . E 3 HOH A 47 4444 69 HOH HOH . E 3 HOH A 48 4445 84 HOH HOH . E 3 HOH A 49 4446 85 HOH HOH . E 3 HOH A 50 4447 86 HOH HOH . E 3 HOH A 51 4448 87 HOH HOH . E 3 HOH A 52 4449 88 HOH HOH . E 3 HOH A 53 4450 89 HOH HOH . E 3 HOH A 54 4451 90 HOH HOH . E 3 HOH A 55 4452 91 HOH HOH . E 3 HOH A 56 4453 92 HOH HOH . E 3 HOH A 57 4454 94 HOH HOH . E 3 HOH A 58 4455 101 HOH HOH . E 3 HOH A 59 4456 102 HOH HOH . E 3 HOH A 60 4457 103 HOH HOH . E 3 HOH A 61 4458 104 HOH HOH . E 3 HOH A 62 4459 105 HOH HOH . E 3 HOH A 63 4460 106 HOH HOH . E 3 HOH A 64 4461 107 HOH HOH . E 3 HOH A 65 4462 108 HOH HOH . E 3 HOH A 66 4463 112 HOH HOH . E 3 HOH A 67 4464 113 HOH HOH . E 3 HOH A 68 4465 114 HOH HOH . E 3 HOH A 69 4466 116 HOH HOH . E 3 HOH A 70 4467 117 HOH HOH . E 3 HOH A 71 4468 118 HOH HOH . E 3 HOH A 72 4469 120 HOH HOH . E 3 HOH A 73 4470 121 HOH HOH . E 3 HOH A 74 4471 122 HOH HOH . E 3 HOH A 75 4472 125 HOH HOH . E 3 HOH A 76 4473 126 HOH HOH . E 3 HOH A 77 4474 128 HOH HOH . E 3 HOH A 78 4475 129 HOH HOH . E 3 HOH A 79 4476 130 HOH HOH . E 3 HOH A 80 4477 131 HOH HOH . E 3 HOH A 81 4478 132 HOH HOH . E 3 HOH A 82 4479 133 HOH HOH . E 3 HOH A 83 4480 134 HOH HOH . E 3 HOH A 84 4481 136 HOH HOH . E 3 HOH A 85 4482 137 HOH HOH . E 3 HOH A 86 4483 138 HOH HOH . E 3 HOH A 87 4484 139 HOH HOH . E 3 HOH A 88 4485 140 HOH HOH . E 3 HOH A 89 4486 142 HOH HOH . E 3 HOH A 90 4487 144 HOH HOH . E 3 HOH A 91 4488 149 HOH HOH . E 3 HOH A 92 4489 154 HOH HOH . E 3 HOH A 93 4490 155 HOH HOH . E 3 HOH A 94 4491 156 HOH HOH . E 3 HOH A 95 4492 158 HOH HOH . E 3 HOH A 96 4493 159 HOH HOH . E 3 HOH A 97 4494 160 HOH HOH . E 3 HOH A 98 4495 162 HOH HOH . E 3 HOH A 99 4496 163 HOH HOH . E 3 HOH A 100 4497 165 HOH HOH . E 3 HOH A 101 4498 167 HOH HOH . E 3 HOH A 102 4499 169 HOH HOH . F 3 HOH B 1 87 1 HOH HOH . F 3 HOH B 2 88 4 HOH HOH . F 3 HOH B 3 89 5 HOH HOH . F 3 HOH B 4 90 10 HOH HOH . F 3 HOH B 5 91 15 HOH HOH . F 3 HOH B 6 92 21 HOH HOH . F 3 HOH B 7 93 22 HOH HOH . F 3 HOH B 8 94 24 HOH HOH . F 3 HOH B 9 95 27 HOH HOH . F 3 HOH B 10 96 28 HOH HOH . F 3 HOH B 11 97 31 HOH HOH . F 3 HOH B 12 98 36 HOH HOH . F 3 HOH B 13 99 37 HOH HOH . F 3 HOH B 14 100 38 HOH HOH . F 3 HOH B 15 101 39 HOH HOH . F 3 HOH B 16 102 41 HOH HOH . F 3 HOH B 17 103 46 HOH HOH . F 3 HOH B 18 104 48 HOH HOH . F 3 HOH B 19 105 54 HOH HOH . F 3 HOH B 20 106 55 HOH HOH . F 3 HOH B 21 107 56 HOH HOH . F 3 HOH B 22 108 61 HOH HOH . F 3 HOH B 23 109 70 HOH HOH . F 3 HOH B 24 110 71 HOH HOH . F 3 HOH B 25 111 72 HOH HOH . F 3 HOH B 26 112 73 HOH HOH . F 3 HOH B 27 113 74 HOH HOH . F 3 HOH B 28 114 75 HOH HOH . F 3 HOH B 29 115 76 HOH HOH . F 3 HOH B 30 116 77 HOH HOH . F 3 HOH B 31 117 78 HOH HOH . F 3 HOH B 32 118 79 HOH HOH . F 3 HOH B 33 119 80 HOH HOH . F 3 HOH B 34 120 81 HOH HOH . F 3 HOH B 35 121 82 HOH HOH . F 3 HOH B 36 122 83 HOH HOH . F 3 HOH B 37 123 93 HOH HOH . F 3 HOH B 38 124 95 HOH HOH . F 3 HOH B 39 125 96 HOH HOH . F 3 HOH B 40 126 97 HOH HOH . F 3 HOH B 41 127 98 HOH HOH . F 3 HOH B 42 128 99 HOH HOH . F 3 HOH B 43 129 100 HOH HOH . F 3 HOH B 44 130 109 HOH HOH . F 3 HOH B 45 131 110 HOH HOH . F 3 HOH B 46 132 111 HOH HOH . F 3 HOH B 47 133 115 HOH HOH . F 3 HOH B 48 134 119 HOH HOH . F 3 HOH B 49 135 123 HOH HOH . F 3 HOH B 50 136 124 HOH HOH . F 3 HOH B 51 137 127 HOH HOH . F 3 HOH B 52 138 135 HOH HOH . F 3 HOH B 53 139 141 HOH HOH . F 3 HOH B 54 140 143 HOH HOH . F 3 HOH B 55 141 145 HOH HOH . F 3 HOH B 56 142 146 HOH HOH . F 3 HOH B 57 143 147 HOH HOH . F 3 HOH B 58 144 148 HOH HOH . F 3 HOH B 59 145 150 HOH HOH . F 3 HOH B 60 146 151 HOH HOH . F 3 HOH B 61 147 152 HOH HOH . F 3 HOH B 62 148 153 HOH HOH . F 3 HOH B 63 149 157 HOH HOH . F 3 HOH B 64 150 161 HOH HOH . F 3 HOH B 65 151 164 HOH HOH . F 3 HOH B 66 152 166 HOH HOH . F 3 HOH B 67 153 168 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 2 28.258 59.973 33.48 1 93.08 ? S SO4 4397 A 1 HETATM 2 O O1 SO4 . . . D 2 28.619 61.402 33.544 1 91.9 ? O1 SO4 4397 A 1 HETATM 3 O O2 SO4 . . . D 2 27.504 59.612 34.694 1 92.48 ? O2 SO4 4397 A 1 HETATM 4 O O3 SO4 . . . D 2 27.419 59.719 32.292 1 91.98 ? O3 SO4 4397 A 1 HETATM 5 O O4 SO4 . . . D 2 29.485 59.155 33.398 1 92.05 ? O4 SO4 4397 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #