data_2ALZ # _model_server_result.job_id nqTQuhKVrAqhOY0BV29xig _model_server_result.datetime_utc '2024-11-15 07:12:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2alz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":872}' # _entry.id 2ALZ # _exptl.entry_id 2ALZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2ALZ _cell.length_a 98.114 _cell.length_b 98.114 _cell.length_c 202.823 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ALZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 49.057 84.969216 33.803833 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B O3' DC 6 P DC 872 1_555 B P DOC 7 P DOC 873 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.559 ? metalc ? metalc1 C OD2 ASP 10 A ASP 34 1_555 E MG MG . A MG 871 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc2 C OD1 ASP 10 A ASP 34 1_555 D MG MG . A MG 872 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.937 ? metalc ? metalc3 C O LEU 11 A LEU 35 1_555 E MG MG . A MG 871 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc4 C OD1 ASP 102 A ASP 126 1_555 E MG MG . A MG 871 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc5 C OD2 ASP 102 A ASP 126 1_555 D MG MG . A MG 872 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.073 ? metalc ? metalc6 C OE2 GLU 103 A GLU 127 1_555 D MG MG . A MG 872 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc7 E MG MG . A MG 871 1_555 F O1G DCP . A DCP 875 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc8 E MG MG . A MG 871 1_555 F O1A DCP . A DCP 875 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc9 E MG MG . A MG 871 1_555 F O2B DCP . A DCP 875 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc10 D MG MG . A MG 872 1_555 F O1A DCP . A DCP 875 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? hydrog WATSON-CRICK hydrog1 A N1 DG 3 T DG 841 1_555 B N3 DOC 7 P DOC 873 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N2 DG 3 T DG 841 1_555 B O2 DOC 7 P DOC 873 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O6 DG 3 T DG 841 1_555 B N4 DOC 7 P DOC 873 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N1 DG 4 T DG 842 1_555 B N3 DC 6 P DC 872 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N2 DG 4 T DG 842 1_555 B O2 DC 6 P DC 872 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O6 DG 4 T DG 842 1_555 B N4 DC 6 P DC 872 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N1 DG 5 T DG 843 1_555 B N3 DC 5 P DC 871 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N2 DG 5 T DG 843 1_555 B O2 DC 5 P DC 871 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A O6 DG 5 T DG 843 1_555 B N4 DC 5 P DC 871 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N3 DT 6 T DT 844 1_555 B N1 DA 4 P DA 870 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A O4 DT 6 T DT 844 1_555 B N6 DA 4 P DA 870 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N3 DC 7 T DC 845 1_555 B N1 DG 3 P DG 869 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N4 DC 7 T DC 845 1_555 B O6 DG 3 P DG 869 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A O2 DC 7 T DC 845 1_555 B N2 DG 3 P DG 869 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N3 DC 8 T DC 846 1_555 B N1 DG 2 P DG 868 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A N4 DC 8 T DC 846 1_555 B O6 DG 2 P DG 868 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A O2 DC 8 T DC 846 1_555 B N2 DG 2 P DG 868 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A N3 DT 9 T DT 847 1_555 B N1 DA 1 P DA 867 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A O4 DT 9 T DT 847 1_555 B N6 DA 1 P DA 867 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2ALZ _atom_sites.fract_transf_matrix[1][1] 0.010192 _atom_sites.fract_transf_matrix[1][2] 0.005884 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011769 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00493 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MG A 1 872 872 MG MG . E 4 MG A 1 871 871 MG MG . F 5 DCP A 1 875 875 DCP DCP . G 6 HOH T 1 903 903 HOH HOH . G 6 HOH T 2 930 930 HOH HOH . G 6 HOH T 3 968 968 HOH HOH . G 6 HOH T 4 974 974 HOH HOH . G 6 HOH T 5 993 993 HOH HOH . H 6 HOH P 1 945 945 HOH HOH . H 6 HOH P 2 950 950 HOH HOH . H 6 HOH P 3 976 976 HOH HOH . H 6 HOH P 4 1014 1014 HOH HOH . I 6 HOH A 1 902 902 HOH HOH . I 6 HOH A 2 905 905 HOH HOH . I 6 HOH A 3 906 906 HOH HOH . I 6 HOH A 4 907 907 HOH HOH . I 6 HOH A 5 908 908 HOH HOH . I 6 HOH A 6 909 909 HOH HOH . I 6 HOH A 7 910 910 HOH HOH . I 6 HOH A 8 911 911 HOH HOH . I 6 HOH A 9 912 912 HOH HOH . I 6 HOH A 10 913 913 HOH HOH . I 6 HOH A 11 914 914 HOH HOH . I 6 HOH A 12 915 915 HOH HOH . I 6 HOH A 13 916 916 HOH HOH . I 6 HOH A 14 917 917 HOH HOH . I 6 HOH A 15 919 919 HOH HOH . I 6 HOH A 16 920 920 HOH HOH . I 6 HOH A 17 921 921 HOH HOH . I 6 HOH A 18 922 922 HOH HOH . I 6 HOH A 19 923 923 HOH HOH . I 6 HOH A 20 924 924 HOH HOH . I 6 HOH A 21 925 925 HOH HOH . I 6 HOH A 22 926 926 HOH HOH . I 6 HOH A 23 928 928 HOH HOH . I 6 HOH A 24 929 929 HOH HOH . I 6 HOH A 25 933 933 HOH HOH . I 6 HOH A 26 935 935 HOH HOH . I 6 HOH A 27 937 937 HOH HOH . I 6 HOH A 28 938 938 HOH HOH . I 6 HOH A 29 939 939 HOH HOH . I 6 HOH A 30 940 940 HOH HOH . I 6 HOH A 31 943 943 HOH HOH . I 6 HOH A 32 944 944 HOH HOH . I 6 HOH A 33 946 946 HOH HOH . I 6 HOH A 34 949 949 HOH HOH . I 6 HOH A 35 954 954 HOH HOH . I 6 HOH A 36 956 956 HOH HOH . I 6 HOH A 37 959 959 HOH HOH . I 6 HOH A 38 960 960 HOH HOH . I 6 HOH A 39 961 961 HOH HOH . I 6 HOH A 40 962 962 HOH HOH . I 6 HOH A 41 967 967 HOH HOH . I 6 HOH A 42 970 970 HOH HOH . I 6 HOH A 43 972 972 HOH HOH . I 6 HOH A 44 973 973 HOH HOH . I 6 HOH A 45 975 975 HOH HOH . I 6 HOH A 46 977 977 HOH HOH . I 6 HOH A 47 978 978 HOH HOH . I 6 HOH A 48 979 979 HOH HOH . I 6 HOH A 49 982 982 HOH HOH . I 6 HOH A 50 983 983 HOH HOH . I 6 HOH A 51 984 984 HOH HOH . I 6 HOH A 52 986 986 HOH HOH . I 6 HOH A 53 987 987 HOH HOH . I 6 HOH A 54 988 988 HOH HOH . I 6 HOH A 55 989 989 HOH HOH . I 6 HOH A 56 995 995 HOH HOH . I 6 HOH A 57 998 998 HOH HOH . I 6 HOH A 58 999 999 HOH HOH . I 6 HOH A 59 1001 1001 HOH HOH . I 6 HOH A 60 1003 1003 HOH HOH . I 6 HOH A 61 1006 1006 HOH HOH . I 6 HOH A 62 1007 1007 HOH HOH . I 6 HOH A 63 1009 1009 HOH HOH . I 6 HOH A 64 1011 1011 HOH HOH . I 6 HOH A 65 1012 1012 HOH HOH . I 6 HOH A 66 1013 1013 HOH HOH . I 6 HOH A 67 1015 1015 HOH HOH . I 6 HOH A 68 1016 1016 HOH HOH . I 6 HOH A 69 1017 1017 HOH HOH . I 6 HOH A 70 1018 1018 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 5.219 _atom_site.Cartn_y 22.467 _atom_site.Cartn_z 13.206 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 57.13 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 872 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 232 _model_server_stats.parse_time_ms 369 _model_server_stats.create_model_time_ms 366 _model_server_stats.query_time_ms 1206 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 1 #