data_2AM9
#
_model_server_result.job_id            0oLgbQAnz6bIZHuRNvjDtg 
_model_server_result.datetime_utc      '2024-11-13 17:54:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2am9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1003}' 
#
_entry.id    2AM9 
#
_exptl.entry_id    2AM9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              154.251 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2,3-DIHYDROXY-1,4-DITHIOBUTANE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2AM9 
_cell.length_a            53.82 
_cell.length_b            65.92 
_cell.length_c            71.04 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2AM9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             33 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              686 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            D 
_struct_conn.ptnr2_label_atom_id            S1 
_struct_conn.ptnr2_label_comp_id            DTT 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             DTT 
_struct_conn.ptnr2_auth_seq_id              1003 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.075 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C4 H10 O2 S2' 
_chem_comp.formula_weight    154.251 
_chem_comp.id                DTT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2,3-DIHYDROXY-1,4-DITHIOBUTANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1,4-DITHIOTHREITOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S1 C1 DTT sing 83 n n 
S1 HS1 DTT sing 84 n n 
C1 C2 DTT sing 85 n n 
C1 H11 DTT sing 86 n n 
C1 H12 DTT sing 87 n n 
C2 O2 DTT sing 88 n n 
C2 C3 DTT sing 89 n n 
C2 H2 DTT sing 90 n n 
O2 HO2 DTT sing 91 n n 
C3 O3 DTT sing 92 n n 
C3 C4 DTT sing 93 n n 
C3 H3 DTT sing 94 n n 
O3 HO3 DTT sing 95 n n 
C4 S4 DTT sing 96 n n 
C4 H41 DTT sing 97 n n 
C4 H42 DTT sing 98 n n 
S4 HS2 DTT sing 99 n n 
#
_atom_sites.entry_id                     2AM9 
_atom_sites.fract_transf_matrix[1][1]    0.01858 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01517 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014077 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 1001 1001 SO4 SO4 . 
C 3 TES A 1 1000 1000 TES TES . 
D 4 DTT A 1 1003 1003 DTT DTT . 
E 5 GOL A 1 1002 1002 GOL GOL . 
F 6 HOH A 1 1 1 HOH HOH . 
F 6 HOH A 2 2 2 HOH HOH . 
F 6 HOH A 3 3 3 HOH HOH . 
F 6 HOH A 4 4 4 HOH HOH . 
F 6 HOH A 5 5 5 HOH HOH . 
F 6 HOH A 6 6 6 HOH HOH . 
F 6 HOH A 7 7 7 HOH HOH . 
F 6 HOH A 8 8 8 HOH HOH . 
F 6 HOH A 9 9 9 HOH HOH . 
F 6 HOH A 10 10 10 HOH HOH . 
F 6 HOH A 11 11 11 HOH HOH . 
F 6 HOH A 12 12 12 HOH HOH . 
F 6 HOH A 13 13 13 HOH HOH . 
F 6 HOH A 14 14 14 HOH HOH . 
F 6 HOH A 15 15 15 HOH HOH . 
F 6 HOH A 16 16 16 HOH HOH . 
F 6 HOH A 17 17 17 HOH HOH . 
F 6 HOH A 18 18 18 HOH HOH . 
F 6 HOH A 19 19 19 HOH HOH . 
F 6 HOH A 20 20 20 HOH HOH . 
F 6 HOH A 21 21 21 HOH HOH . 
F 6 HOH A 22 22 22 HOH HOH . 
F 6 HOH A 23 23 23 HOH HOH . 
F 6 HOH A 24 24 24 HOH HOH . 
F 6 HOH A 25 25 25 HOH HOH . 
F 6 HOH A 26 26 26 HOH HOH . 
F 6 HOH A 27 27 27 HOH HOH . 
F 6 HOH A 28 28 28 HOH HOH . 
F 6 HOH A 29 29 29 HOH HOH . 
F 6 HOH A 30 30 30 HOH HOH . 
F 6 HOH A 31 31 31 HOH HOH . 
F 6 HOH A 32 32 32 HOH HOH . 
F 6 HOH A 33 33 33 HOH HOH . 
F 6 HOH A 34 34 34 HOH HOH . 
F 6 HOH A 35 35 35 HOH HOH . 
F 6 HOH A 36 36 36 HOH HOH . 
F 6 HOH A 37 37 37 HOH HOH . 
F 6 HOH A 38 38 38 HOH HOH . 
F 6 HOH A 39 39 39 HOH HOH . 
F 6 HOH A 40 40 40 HOH HOH . 
F 6 HOH A 41 41 41 HOH HOH . 
F 6 HOH A 42 42 42 HOH HOH . 
F 6 HOH A 43 43 43 HOH HOH . 
F 6 HOH A 44 44 44 HOH HOH . 
F 6 HOH A 45 45 45 HOH HOH . 
F 6 HOH A 46 46 46 HOH HOH . 
F 6 HOH A 47 47 47 HOH HOH . 
F 6 HOH A 48 48 48 HOH HOH . 
F 6 HOH A 49 49 49 HOH HOH . 
F 6 HOH A 50 50 50 HOH HOH . 
F 6 HOH A 51 51 51 HOH HOH . 
F 6 HOH A 52 52 52 HOH HOH . 
F 6 HOH A 53 53 53 HOH HOH . 
F 6 HOH A 54 54 54 HOH HOH . 
F 6 HOH A 55 55 55 HOH HOH . 
F 6 HOH A 56 56 56 HOH HOH . 
F 6 HOH A 57 57 57 HOH HOH . 
F 6 HOH A 58 58 58 HOH HOH . 
F 6 HOH A 59 59 59 HOH HOH . 
F 6 HOH A 60 60 60 HOH HOH . 
F 6 HOH A 61 61 61 HOH HOH . 
F 6 HOH A 62 62 62 HOH HOH . 
F 6 HOH A 63 63 63 HOH HOH . 
F 6 HOH A 64 64 64 HOH HOH . 
F 6 HOH A 65 65 65 HOH HOH . 
F 6 HOH A 66 66 66 HOH HOH . 
F 6 HOH A 67 67 67 HOH HOH . 
F 6 HOH A 68 68 68 HOH HOH . 
F 6 HOH A 69 69 69 HOH HOH . 
F 6 HOH A 70 70 70 HOH HOH . 
F 6 HOH A 71 71 71 HOH HOH . 
F 6 HOH A 72 72 72 HOH HOH . 
F 6 HOH A 73 73 73 HOH HOH . 
F 6 HOH A 74 74 74 HOH HOH . 
F 6 HOH A 75 75 75 HOH HOH . 
F 6 HOH A 76 76 76 HOH HOH . 
F 6 HOH A 77 77 77 HOH HOH . 
F 6 HOH A 78 78 78 HOH HOH . 
F 6 HOH A 79 79 79 HOH HOH . 
F 6 HOH A 80 80 80 HOH HOH . 
F 6 HOH A 81 81 81 HOH HOH . 
F 6 HOH A 82 82 82 HOH HOH . 
F 6 HOH A 83 83 83 HOH HOH . 
F 6 HOH A 84 84 84 HOH HOH . 
F 6 HOH A 85 85 85 HOH HOH . 
F 6 HOH A 86 86 86 HOH HOH . 
F 6 HOH A 87 87 87 HOH HOH . 
F 6 HOH A 88 88 88 HOH HOH . 
F 6 HOH A 89 89 89 HOH HOH . 
F 6 HOH A 90 90 90 HOH HOH . 
F 6 HOH A 91 91 91 HOH HOH . 
F 6 HOH A 92 92 92 HOH HOH . 
F 6 HOH A 93 93 93 HOH HOH . 
F 6 HOH A 94 94 94 HOH HOH . 
F 6 HOH A 95 95 95 HOH HOH . 
F 6 HOH A 96 96 96 HOH HOH . 
F 6 HOH A 97 97 97 HOH HOH . 
F 6 HOH A 98 98 98 HOH HOH . 
F 6 HOH A 99 99 99 HOH HOH . 
F 6 HOH A 100 100 100 HOH HOH . 
F 6 HOH A 101 101 101 HOH HOH . 
F 6 HOH A 102 102 102 HOH HOH . 
F 6 HOH A 103 103 103 HOH HOH . 
F 6 HOH A 104 104 104 HOH HOH . 
F 6 HOH A 105 105 105 HOH HOH . 
F 6 HOH A 106 106 106 HOH HOH . 
F 6 HOH A 107 107 107 HOH HOH . 
F 6 HOH A 108 108 108 HOH HOH . 
F 6 HOH A 109 109 109 HOH HOH . 
F 6 HOH A 110 110 110 HOH HOH . 
F 6 HOH A 111 111 111 HOH HOH . 
F 6 HOH A 112 112 112 HOH HOH . 
F 6 HOH A 113 113 113 HOH HOH . 
F 6 HOH A 114 114 114 HOH HOH . 
F 6 HOH A 115 115 115 HOH HOH . 
F 6 HOH A 116 116 116 HOH HOH . 
F 6 HOH A 117 117 117 HOH HOH . 
F 6 HOH A 118 118 118 HOH HOH . 
F 6 HOH A 119 119 119 HOH HOH . 
F 6 HOH A 120 120 120 HOH HOH . 
F 6 HOH A 121 121 121 HOH HOH . 
F 6 HOH A 122 122 122 HOH HOH . 
F 6 HOH A 123 123 123 HOH HOH . 
F 6 HOH A 124 124 124 HOH HOH . 
F 6 HOH A 125 125 125 HOH HOH . 
F 6 HOH A 126 126 126 HOH HOH . 
F 6 HOH A 127 127 127 HOH HOH . 
F 6 HOH A 128 128 128 HOH HOH . 
F 6 HOH A 129 129 129 HOH HOH . 
F 6 HOH A 130 130 130 HOH HOH . 
F 6 HOH A 131 131 131 HOH HOH . 
F 6 HOH A 132 132 132 HOH HOH . 
F 6 HOH A 133 133 133 HOH HOH . 
F 6 HOH A 134 134 134 HOH HOH . 
F 6 HOH A 135 135 135 HOH HOH . 
F 6 HOH A 136 136 136 HOH HOH . 
F 6 HOH A 137 137 137 HOH HOH . 
F 6 HOH A 138 138 138 HOH HOH . 
F 6 HOH A 139 139 139 HOH HOH . 
F 6 HOH A 140 140 140 HOH HOH . 
F 6 HOH A 141 141 141 HOH HOH . 
F 6 HOH A 142 142 142 HOH HOH . 
F 6 HOH A 143 143 143 HOH HOH . 
F 6 HOH A 144 144 144 HOH HOH . 
F 6 HOH A 145 145 145 HOH HOH . 
F 6 HOH A 146 146 146 HOH HOH . 
F 6 HOH A 147 147 147 HOH HOH . 
F 6 HOH A 148 148 148 HOH HOH . 
F 6 HOH A 149 149 149 HOH HOH . 
F 6 HOH A 150 150 150 HOH HOH . 
F 6 HOH A 151 151 151 HOH HOH . 
F 6 HOH A 152 152 152 HOH HOH . 
F 6 HOH A 153 153 153 HOH HOH . 
F 6 HOH A 154 154 154 HOH HOH . 
F 6 HOH A 155 155 155 HOH HOH . 
F 6 HOH A 156 156 156 HOH HOH . 
F 6 HOH A 157 157 157 HOH HOH . 
F 6 HOH A 158 158 158 HOH HOH . 
F 6 HOH A 159 159 159 HOH HOH . 
F 6 HOH A 160 160 160 HOH HOH . 
F 6 HOH A 161 161 161 HOH HOH . 
F 6 HOH A 162 162 162 HOH HOH . 
F 6 HOH A 163 163 163 HOH HOH . 
F 6 HOH A 164 164 164 HOH HOH . 
F 6 HOH A 165 165 165 HOH HOH . 
F 6 HOH A 166 166 166 HOH HOH . 
F 6 HOH A 167 167 167 HOH HOH . 
F 6 HOH A 168 168 168 HOH HOH . 
F 6 HOH A 169 169 169 HOH HOH . 
F 6 HOH A 170 170 170 HOH HOH . 
F 6 HOH A 171 171 171 HOH HOH . 
F 6 HOH A 172 172 172 HOH HOH . 
F 6 HOH A 173 173 173 HOH HOH . 
F 6 HOH A 174 174 174 HOH HOH . 
F 6 HOH A 175 175 175 HOH HOH . 
F 6 HOH A 176 176 176 HOH HOH . 
F 6 HOH A 177 177 177 HOH HOH . 
F 6 HOH A 178 178 178 HOH HOH . 
F 6 HOH A 179 179 179 HOH HOH . 
F 6 HOH A 180 180 180 HOH HOH . 
F 6 HOH A 181 181 181 HOH HOH . 
F 6 HOH A 182 182 182 HOH HOH . 
F 6 HOH A 183 183 183 HOH HOH . 
F 6 HOH A 184 184 184 HOH HOH . 
F 6 HOH A 185 185 185 HOH HOH . 
F 6 HOH A 186 186 186 HOH HOH . 
F 6 HOH A 187 187 187 HOH HOH . 
F 6 HOH A 188 188 188 HOH HOH . 
F 6 HOH A 189 189 189 HOH HOH . 
F 6 HOH A 190 190 190 HOH HOH . 
F 6 HOH A 191 191 191 HOH HOH . 
F 6 HOH A 192 192 192 HOH HOH . 
F 6 HOH A 193 193 193 HOH HOH . 
F 6 HOH A 194 194 194 HOH HOH . 
F 6 HOH A 195 195 195 HOH HOH . 
F 6 HOH A 196 196 196 HOH HOH . 
F 6 HOH A 197 197 197 HOH HOH . 
F 6 HOH A 198 198 198 HOH HOH . 
F 6 HOH A 199 199 199 HOH HOH . 
F 6 HOH A 200 200 200 HOH HOH . 
F 6 HOH A 201 201 201 HOH HOH . 
F 6 HOH A 202 202 202 HOH HOH . 
F 6 HOH A 203 203 203 HOH HOH . 
F 6 HOH A 204 204 204 HOH HOH . 
F 6 HOH A 205 205 205 HOH HOH . 
F 6 HOH A 206 206 206 HOH HOH . 
F 6 HOH A 207 207 207 HOH HOH . 
F 6 HOH A 208 208 208 HOH HOH . 
F 6 HOH A 209 209 209 HOH HOH . 
F 6 HOH A 210 210 210 HOH HOH . 
F 6 HOH A 211 211 211 HOH HOH . 
F 6 HOH A 212 212 212 HOH HOH . 
F 6 HOH A 213 213 213 HOH HOH . 
F 6 HOH A 214 214 214 HOH HOH . 
F 6 HOH A 215 215 215 HOH HOH . 
F 6 HOH A 216 216 216 HOH HOH . 
F 6 HOH A 217 217 217 HOH HOH . 
F 6 HOH A 218 218 218 HOH HOH . 
F 6 HOH A 219 219 219 HOH HOH . 
F 6 HOH A 220 220 220 HOH HOH . 
F 6 HOH A 221 221 221 HOH HOH . 
F 6 HOH A 222 222 222 HOH HOH . 
F 6 HOH A 223 223 223 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S1 DTT . . . D 4 29.143 16.111 -2.13 0.6 38.22 ? S1 DTT 1003 A 1 
HETATM 2 C C1 DTT . . . D 4 28.502 17.309 -3.311 0.6 39.51 ? C1 DTT 1003 A 1 
HETATM 3 C C2 DTT . . . D 4 28.897 16.715 -4.647 0.6 40.86 ? C2 DTT 1003 A 1 
HETATM 4 O O2 DTT . . . D 4 28.35 17.312 -5.379 0.6 41.89 ? O2 DTT 1003 A 1 
HETATM 5 C C3 DTT . . . D 4 30.311 16.48 -4.87 0.6 43.39 ? C3 DTT 1003 A 1 
HETATM 6 O O3 DTT . . . D 4 30.979 16.988 -3.787 0.6 43.95 ? O3 DTT 1003 A 1 
HETATM 7 C C4 DTT . . . D 4 30.975 17.105 -6.002 0.6 44.61 ? C4 DTT 1003 A 1 
HETATM 8 S S4 DTT . . . D 4 32.173 15.872 -5.998 0.6 49.79 ? S4 DTT 1003 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           294 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           8 
#