data_2AMA # _model_server_result.job_id ynBJ64rOs5FC7L801ikPIw _model_server_result.datetime_utc '2024-11-27 17:13:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ama # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1001}' # _entry.id 2AMA # _exptl.entry_id 2AMA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 290.44 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-ALPHA-DIHYDROTESTOSTERONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2AMA _cell.length_a 55.5 _cell.length_b 66.3 _cell.length_c 70.7 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2AMA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H30 O2' _chem_comp.formula_weight 290.44 _chem_comp.id DHT _chem_comp.mon_nstd_flag . _chem_comp.name 5-ALPHA-DIHYDROTESTOSTERONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 DHT sing 83 n n C1 C10 DHT sing 84 n n C1 H11 DHT sing 85 n n C1 H12 DHT sing 86 n n C2 C3 DHT sing 87 n n C2 H21 DHT sing 88 n n C2 H22 DHT sing 89 n n C3 O3 DHT doub 90 n n C3 C4 DHT sing 91 n n C4 C5 DHT sing 92 n n C4 H41 DHT sing 93 n n C4 H42 DHT sing 94 n n C5 C6 DHT sing 95 n n C5 C10 DHT sing 96 n n C5 H5 DHT sing 97 n n C6 C7 DHT sing 98 n n C6 H61 DHT sing 99 n n C6 H62 DHT sing 100 n n C7 C8 DHT sing 101 n n C7 H71 DHT sing 102 n n C7 H72 DHT sing 103 n n C8 C9 DHT sing 104 n n C8 C14 DHT sing 105 n n C8 H8 DHT sing 106 n n C9 C10 DHT sing 107 n n C9 C11 DHT sing 108 n n C9 H9 DHT sing 109 n n C10 C19 DHT sing 110 n n C11 C12 DHT sing 111 n n C11 H111 DHT sing 112 n n C11 H112 DHT sing 113 n n C12 C13 DHT sing 114 n n C12 H121 DHT sing 115 n n C12 H122 DHT sing 116 n n C13 C14 DHT sing 117 n n C13 C17 DHT sing 118 n n C13 C18 DHT sing 119 n n C14 C15 DHT sing 120 n n C14 H14 DHT sing 121 n n C15 C16 DHT sing 122 n n C15 H151 DHT sing 123 n n C15 H152 DHT sing 124 n n C16 C17 DHT sing 125 n n C16 H161 DHT sing 126 n n C16 H162 DHT sing 127 n n C17 O17 DHT sing 128 n n C17 H17 DHT sing 129 n n O17 HO7 DHT sing 130 n n C18 H181 DHT sing 131 n n C18 H182 DHT sing 132 n n C18 H183 DHT sing 133 n n C19 H191 DHT sing 134 n n C19 H192 DHT sing 135 n n C19 H193 DHT sing 136 n n # _atom_sites.entry_id 2AMA _atom_sites.fract_transf_matrix[1][1] 0.018018 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015083 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014144 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 1000 1000 SO4 SO4 . C 3 DHT A 1 1001 1001 DHT DHT . D 4 HOH A 1 1 1 HOH HOH . D 4 HOH A 2 2 2 HOH HOH . D 4 HOH A 3 3 3 HOH HOH . D 4 HOH A 4 4 4 HOH HOH . D 4 HOH A 5 5 5 HOH HOH . D 4 HOH A 6 6 6 HOH HOH . D 4 HOH A 7 7 7 HOH HOH . D 4 HOH A 8 8 8 HOH HOH . D 4 HOH A 9 9 9 HOH HOH . D 4 HOH A 10 10 10 HOH HOH . D 4 HOH A 11 11 11 HOH HOH . D 4 HOH A 12 12 12 HOH HOH . D 4 HOH A 13 13 13 HOH HOH . D 4 HOH A 14 14 14 HOH HOH . D 4 HOH A 15 15 15 HOH HOH . D 4 HOH A 16 16 16 HOH HOH . D 4 HOH A 17 17 17 HOH HOH . D 4 HOH A 18 18 18 HOH HOH . D 4 HOH A 19 19 19 HOH HOH . D 4 HOH A 20 20 20 HOH HOH . D 4 HOH A 21 21 21 HOH HOH . D 4 HOH A 22 22 22 HOH HOH . D 4 HOH A 23 23 23 HOH HOH . D 4 HOH A 24 24 24 HOH HOH . D 4 HOH A 25 25 25 HOH HOH . D 4 HOH A 26 26 26 HOH HOH . D 4 HOH A 27 27 27 HOH HOH . D 4 HOH A 28 28 28 HOH HOH . D 4 HOH A 29 29 29 HOH HOH . D 4 HOH A 30 30 30 HOH HOH . D 4 HOH A 31 31 31 HOH HOH . D 4 HOH A 32 32 32 HOH HOH . D 4 HOH A 33 33 33 HOH HOH . D 4 HOH A 34 34 34 HOH HOH . D 4 HOH A 35 35 35 HOH HOH . D 4 HOH A 36 36 36 HOH HOH . D 4 HOH A 37 37 37 HOH HOH . D 4 HOH A 38 38 38 HOH HOH . D 4 HOH A 39 39 39 HOH HOH . D 4 HOH A 40 40 40 HOH HOH . D 4 HOH A 41 41 41 HOH HOH . D 4 HOH A 42 42 42 HOH HOH . D 4 HOH A 43 43 43 HOH HOH . D 4 HOH A 44 44 44 HOH HOH . D 4 HOH A 45 45 45 HOH HOH . D 4 HOH A 46 46 46 HOH HOH . D 4 HOH A 47 47 47 HOH HOH . D 4 HOH A 48 48 48 HOH HOH . D 4 HOH A 49 49 49 HOH HOH . D 4 HOH A 50 50 50 HOH HOH . D 4 HOH A 51 51 51 HOH HOH . D 4 HOH A 52 52 52 HOH HOH . D 4 HOH A 53 53 53 HOH HOH . D 4 HOH A 54 54 54 HOH HOH . D 4 HOH A 55 55 55 HOH HOH . D 4 HOH A 56 56 56 HOH HOH . D 4 HOH A 57 57 57 HOH HOH . D 4 HOH A 58 58 58 HOH HOH . D 4 HOH A 59 59 59 HOH HOH . D 4 HOH A 60 60 60 HOH HOH . D 4 HOH A 61 61 61 HOH HOH . D 4 HOH A 62 62 62 HOH HOH . D 4 HOH A 63 63 63 HOH HOH . D 4 HOH A 64 64 64 HOH HOH . D 4 HOH A 65 65 65 HOH HOH . D 4 HOH A 66 66 66 HOH HOH . D 4 HOH A 67 67 67 HOH HOH . D 4 HOH A 68 68 68 HOH HOH . D 4 HOH A 69 69 69 HOH HOH . D 4 HOH A 70 70 70 HOH HOH . D 4 HOH A 71 71 71 HOH HOH . D 4 HOH A 72 72 72 HOH HOH . D 4 HOH A 73 73 73 HOH HOH . D 4 HOH A 74 74 74 HOH HOH . D 4 HOH A 75 75 75 HOH HOH . D 4 HOH A 76 76 76 HOH HOH . D 4 HOH A 77 77 77 HOH HOH . D 4 HOH A 78 78 78 HOH HOH . D 4 HOH A 79 79 79 HOH HOH . D 4 HOH A 80 80 80 HOH HOH . D 4 HOH A 81 81 81 HOH HOH . D 4 HOH A 82 82 82 HOH HOH . D 4 HOH A 83 83 83 HOH HOH . D 4 HOH A 84 84 84 HOH HOH . D 4 HOH A 85 85 85 HOH HOH . D 4 HOH A 86 86 86 HOH HOH . D 4 HOH A 87 87 87 HOH HOH . D 4 HOH A 88 88 88 HOH HOH . D 4 HOH A 89 89 89 HOH HOH . D 4 HOH A 90 90 90 HOH HOH . D 4 HOH A 91 91 91 HOH HOH . D 4 HOH A 92 92 92 HOH HOH . D 4 HOH A 93 93 93 HOH HOH . D 4 HOH A 94 94 94 HOH HOH . D 4 HOH A 95 95 95 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DHT . . . C 3 27.333 5.146 4.391 1 28.58 ? C1 DHT 1001 A 1 HETATM 2 C C2 DHT . . . C 3 26.429 6.316 4.843 1 29.67 ? C2 DHT 1001 A 1 HETATM 3 C C3 DHT . . . C 3 24.996 6.07 4.217 1 31.35 ? C3 DHT 1001 A 1 HETATM 4 O O3 DHT . . . C 3 24.607 7.027 3.542 1 29.06 ? O3 DHT 1001 A 1 HETATM 5 C C4 DHT . . . C 3 24.457 4.947 4.47 1 28.05 ? C4 DHT 1001 A 1 HETATM 6 C C5 DHT . . . C 3 25.298 3.711 3.991 1 27.71 ? C5 DHT 1001 A 1 HETATM 7 C C6 DHT . . . C 3 24.602 2.33 4.266 1 30.61 ? C6 DHT 1001 A 1 HETATM 8 C C7 DHT . . . C 3 25.489 1.178 3.736 1 27.94 ? C7 DHT 1001 A 1 HETATM 9 C C8 DHT . . . C 3 26.903 1.155 4.418 1 29.45 ? C8 DHT 1001 A 1 HETATM 10 C C9 DHT . . . C 3 27.595 2.546 4.176 1 28.63 ? C9 DHT 1001 A 1 HETATM 11 C C10 DHT . . . C 3 26.723 3.762 4.709 1 27.91 ? C10 DHT 1001 A 1 HETATM 12 C C11 DHT . . . C 3 29.014 2.494 4.83 1 27.78 ? C11 DHT 1001 A 1 HETATM 13 C C12 DHT . . . C 3 29.93 1.352 4.399 1 27.69 ? C12 DHT 1001 A 1 HETATM 14 C C13 DHT . . . C 3 29.243 -0.037 4.508 1 28.83 ? C13 DHT 1001 A 1 HETATM 15 C C14 DHT . . . C 3 27.819 0.036 3.848 1 28.82 ? C14 DHT 1001 A 1 HETATM 16 C C15 DHT . . . C 3 27.337 -1.425 3.977 1 30.55 ? C15 DHT 1001 A 1 HETATM 17 C C16 DHT . . . C 3 28.619 -2.223 3.59 1 30.01 ? C16 DHT 1001 A 1 HETATM 18 C C17 DHT . . . C 3 29.778 -1.191 3.68 1 29.08 ? C17 DHT 1001 A 1 HETATM 19 O O17 DHT . . . C 3 30.926 -1.817 4.264 1 32.95 ? O17 DHT 1001 A 1 HETATM 20 C C18 DHT . . . C 3 29.164 -0.442 6.035 1 28.37 ? C18 DHT 1001 A 1 HETATM 21 C C19 DHT . . . C 3 26.561 3.623 6.279 1 26.66 ? C19 DHT 1001 A 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 21 #