data_2AR9 # _model_server_result.job_id kqQdh0kMRywvHa7Tu4PfTQ _model_server_result.datetime_utc '2024-11-22 15:14:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ar9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":668}' # _entry.id 2AR9 # _exptl.entry_id 2AR9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 134.087 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description D-MALATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.5 _cell.angle_gamma 90 _cell.entry_id 2AR9 _cell.length_a 144.698 _cell.length_b 78.055 _cell.length_c 125.963 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2AR9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G 1 1 C,D,H,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H6 O5' _chem_comp.formula_weight 134.087 _chem_comp.id MLT _chem_comp.mon_nstd_flag . _chem_comp.name D-MALATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(2R)-2-HYDROXYBUTANEDIOIC ACID;2-HYDROXY-SUCCINIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 MLT doub 237 n n C1 O2 MLT sing 238 n n C1 C2 MLT sing 239 n n C2 O3 MLT sing 240 n n C2 C3 MLT sing 241 n n C2 H2 MLT sing 242 n n O3 HO3 MLT sing 243 n n C3 C4 MLT sing 244 n n C3 H31 MLT sing 245 n n C3 H32 MLT sing 246 n n C4 O4 MLT doub 247 n n C4 O5 MLT sing 248 n n O5 HO5 MLT sing 249 n n O2 H6 MLT sing 250 n n # _atom_sites.entry_id 2AR9 _atom_sites.fract_transf_matrix[1][1] 0.006911 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002863 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012811 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008593 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MLT A 1 668 668 MLT DMR . F 3 HOH A 1 669 2 HOH WAT . F 3 HOH A 2 670 5 HOH WAT . F 3 HOH A 3 671 6 HOH WAT . F 3 HOH A 4 672 11 HOH WAT . F 3 HOH A 5 673 14 HOH WAT . F 3 HOH A 6 674 15 HOH WAT . F 3 HOH A 7 675 16 HOH WAT . F 3 HOH A 8 676 18 HOH WAT . F 3 HOH A 9 677 21 HOH WAT . F 3 HOH A 10 678 23 HOH WAT . F 3 HOH A 11 679 26 HOH WAT . F 3 HOH A 12 680 36 HOH WAT . F 3 HOH A 13 681 45 HOH WAT . F 3 HOH A 14 682 46 HOH WAT . F 3 HOH A 15 683 49 HOH WAT . F 3 HOH A 16 684 50 HOH WAT . F 3 HOH A 17 685 56 HOH WAT . F 3 HOH A 18 686 59 HOH WAT . F 3 HOH A 19 687 65 HOH WAT . F 3 HOH A 20 688 74 HOH WAT . F 3 HOH A 21 689 75 HOH WAT . F 3 HOH A 22 690 108 HOH WAT . F 3 HOH A 23 691 111 HOH WAT . F 3 HOH A 24 692 117 HOH WAT . F 3 HOH A 25 693 119 HOH WAT . F 3 HOH A 26 694 121 HOH WAT . F 3 HOH A 27 695 122 HOH WAT . F 3 HOH A 28 696 130 HOH WAT . F 3 HOH A 29 697 131 HOH WAT . F 3 HOH A 30 698 132 HOH WAT . F 3 HOH A 31 699 133 HOH WAT . F 3 HOH A 32 700 134 HOH WAT . F 3 HOH A 33 701 205 HOH WAT . F 3 HOH A 34 702 211 HOH WAT . F 3 HOH A 35 703 214 HOH WAT . F 3 HOH A 36 704 215 HOH WAT . F 3 HOH A 37 705 216 HOH WAT . F 3 HOH A 38 706 219 HOH WAT . F 3 HOH A 39 707 306 HOH WAT . F 3 HOH A 40 708 308 HOH WAT . F 3 HOH A 41 709 310 HOH WAT . F 3 HOH A 42 710 311 HOH WAT . F 3 HOH A 43 711 312 HOH WAT . F 3 HOH A 44 712 313 HOH WAT . F 3 HOH A 45 713 314 HOH WAT . G 3 HOH B 1 417 4 HOH WAT . G 3 HOH B 2 418 7 HOH WAT . G 3 HOH B 3 419 13 HOH WAT . G 3 HOH B 4 420 17 HOH WAT . G 3 HOH B 5 421 20 HOH WAT . G 3 HOH B 6 422 32 HOH WAT . G 3 HOH B 7 423 35 HOH WAT . G 3 HOH B 8 424 42 HOH WAT . G 3 HOH B 9 425 43 HOH WAT . G 3 HOH B 10 426 47 HOH WAT . G 3 HOH B 11 427 48 HOH WAT . G 3 HOH B 12 428 53 HOH WAT . G 3 HOH B 13 429 55 HOH WAT . G 3 HOH B 14 430 60 HOH WAT . G 3 HOH B 15 431 102 HOH WAT . G 3 HOH B 16 432 105 HOH WAT . G 3 HOH B 17 433 109 HOH WAT . G 3 HOH B 18 434 110 HOH WAT . G 3 HOH B 19 435 112 HOH WAT . G 3 HOH B 20 436 114 HOH WAT . G 3 HOH B 21 437 116 HOH WAT . G 3 HOH B 22 438 123 HOH WAT . G 3 HOH B 23 439 124 HOH WAT . G 3 HOH B 24 440 125 HOH WAT . G 3 HOH B 25 441 129 HOH WAT . G 3 HOH B 26 442 201 HOH WAT . G 3 HOH B 27 443 202 HOH WAT . G 3 HOH B 28 444 203 HOH WAT . G 3 HOH B 29 445 204 HOH WAT . G 3 HOH B 30 446 206 HOH WAT . G 3 HOH B 31 447 213 HOH WAT . G 3 HOH B 32 448 218 HOH WAT . G 3 HOH B 33 449 303 HOH WAT . G 3 HOH B 34 450 304 HOH WAT . H 3 HOH C 1 417 8 HOH WAT . H 3 HOH C 2 418 9 HOH WAT . H 3 HOH C 3 419 19 HOH WAT . H 3 HOH C 4 420 22 HOH WAT . H 3 HOH C 5 421 25 HOH WAT . H 3 HOH C 6 422 44 HOH WAT . H 3 HOH C 7 423 51 HOH WAT . H 3 HOH C 8 424 52 HOH WAT . H 3 HOH C 9 425 54 HOH WAT . H 3 HOH C 10 426 57 HOH WAT . H 3 HOH C 11 427 62 HOH WAT . H 3 HOH C 12 428 66 HOH WAT . H 3 HOH C 13 429 70 HOH WAT . H 3 HOH C 14 430 77 HOH WAT . H 3 HOH C 15 431 101 HOH WAT . H 3 HOH C 16 432 103 HOH WAT . H 3 HOH C 17 433 106 HOH WAT . H 3 HOH C 18 434 113 HOH WAT . H 3 HOH C 19 435 127 HOH WAT . H 3 HOH C 20 436 136 HOH WAT . H 3 HOH C 21 437 137 HOH WAT . H 3 HOH C 22 438 212 HOH WAT . H 3 HOH C 23 439 305 HOH WAT . H 3 HOH C 24 440 309 HOH WAT . I 3 HOH D 1 417 3 HOH WAT . I 3 HOH D 2 418 12 HOH WAT . I 3 HOH D 3 419 24 HOH WAT . I 3 HOH D 4 420 27 HOH WAT . I 3 HOH D 5 421 29 HOH WAT . I 3 HOH D 6 422 34 HOH WAT . I 3 HOH D 7 423 38 HOH WAT . I 3 HOH D 8 424 39 HOH WAT . I 3 HOH D 9 425 40 HOH WAT . I 3 HOH D 10 426 41 HOH WAT . I 3 HOH D 11 427 58 HOH WAT . I 3 HOH D 12 428 61 HOH WAT . I 3 HOH D 13 429 69 HOH WAT . I 3 HOH D 14 430 72 HOH WAT . I 3 HOH D 15 431 73 HOH WAT . I 3 HOH D 16 432 76 HOH WAT . I 3 HOH D 17 433 104 HOH WAT . I 3 HOH D 18 434 107 HOH WAT . I 3 HOH D 19 435 118 HOH WAT . I 3 HOH D 20 436 120 HOH WAT . I 3 HOH D 21 437 126 HOH WAT . I 3 HOH D 22 438 128 HOH WAT . I 3 HOH D 23 439 135 HOH WAT . I 3 HOH D 24 440 207 HOH WAT . I 3 HOH D 25 441 208 HOH WAT . I 3 HOH D 26 442 209 HOH WAT . I 3 HOH D 27 443 210 HOH WAT . I 3 HOH D 28 444 217 HOH WAT . I 3 HOH D 29 445 301 HOH WAT . I 3 HOH D 30 446 307 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MLT . . . E 2 21.965 33.19 -18.822 1 19.82 ? C1 MLT 668 A 1 HETATM 2 O O1 MLT . . . E 2 21.565 32.178 -19.425 1 19.82 ? O1 MLT 668 A 1 HETATM 3 O O2 MLT . . . E 2 22.233 33.184 -17.58 1 19.82 ? O2 MLT 668 A 1 HETATM 4 C C2 MLT . . . E 2 21.821 34.539 -19.536 1 19.82 ? C2 MLT 668 A 1 HETATM 5 O O3 MLT . . . E 2 20.286 34.753 -19.421 1 19.82 ? O3 MLT 668 A 1 HETATM 6 C C3 MLT . . . E 2 22.466 35.785 -18.878 1 19.82 ? C3 MLT 668 A 1 HETATM 7 C C4 MLT . . . E 2 22.09 36.244 -17.472 1 19.82 ? C4 MLT 668 A 1 HETATM 8 O O4 MLT . . . E 2 22.677 37.322 -17.038 1 19.82 ? O4 MLT 668 A 1 HETATM 9 O O5 MLT . . . E 2 21.222 35.582 -16.773 1 19.82 ? O5 MLT 668 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 9 #