data_2ARG # _model_server_result.job_id EVawNcwu0T6yxJg9TSSvbQ _model_server_result.datetime_utc '2025-03-06 06:02:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2arg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":31}' # _entry.id 2ARG # _exptl.entry_id 2ARG _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 174.224 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ARGININEAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ARG _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ARG _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog WATSON-CRICK hydrog1 A N3 DT 1 A DT 1 1_555 A N1 DA 30 A DA 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A O4 DT 1 A DT 1 1_555 A N6 DA 30 A DA 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A N1 DG 2 A DG 2 1_555 A N3 DC 29 A DC 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N2 DG 2 A DG 2 1_555 A O2 DC 29 A DC 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A O6 DG 2 A DG 2 1_555 A N4 DC 29 A DC 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A N1 DA 3 A DA 3 1_555 A N3 DT 28 A DT 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N6 DA 3 A DA 3 1_555 A O4 DT 28 A DT 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N3 DC 4 A DC 4 1_555 A N1 DG 27 A DG 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N4 DC 4 A DC 4 1_555 A O6 DG 27 A DG 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A O2 DC 4 A DC 4 1_555 A N2 DG 27 A DG 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N3 DC 5 A DC 5 1_555 A N1 DG 26 A DG 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N4 DC 5 A DC 5 1_555 A O6 DG 26 A DG 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A O2 DC 5 A DC 5 1_555 A N2 DG 26 A DG 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N1 DA 6 A DA 6 1_555 A N3 DT 25 A DT 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N6 DA 6 A DA 6 1_555 A O4 DT 25 A DT 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog16 A N1 DG 7 A DG 7 1_555 A O6 DG 24 A DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog17 A N2 DG 7 A DG 7 1_555 A N7 DG 24 A DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_11_PAIR hydrog18 A N2 DG 8 A DG 8 1_555 A N7 DA 11 A DA 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_11_PAIR hydrog19 A N3 DG 8 A DG 8 1_555 A N6 DA 11 A DA 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DA MISPAIR' hydrog20 A N2 DG 8 A DG 8 1_555 A N1 DA 23 A DA 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DG MISPAIR' hydrog21 A N2 DG 9 A DG 9 1_555 A O6 DG 22 A DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N3 DC 10 A DC 10 1_555 A N1 DG 15 A DG 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A N4 DC 10 A DC 10 1_555 A O6 DG 15 A DG 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A O2 DC 10 A DC 10 1_555 A N2 DG 15 A DG 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_11_PAIR hydrog25 A N6 DA 12 A DA 12 1_555 A N3 DG 22 A DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_11_PAIR hydrog26 A N7 DA 12 A DA 12 1_555 A N2 DG 22 A DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 A N1 DA 13 A DA 13 1_555 A N3 DT 21 A DT 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 A N6 DA 13 A DA 13 1_555 A O4 DT 21 A DT 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 A N3 DC 14 A DC 14 1_555 A N1 DG 20 A DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 A N4 DC 14 A DC 14 1_555 A O6 DG 20 A DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog31 A O2 DC 14 A DC 14 1_555 A N2 DG 20 A DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DA MISPAIR' hydrog32 A N3 DG 15 A DG 15 1_555 A N6 DA 18 A DA 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DG MISPAIR' hydrog33 A N2 DG 15 A DG 15 1_555 A O6 DG 20 A DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DT MISPAIR' hydrog34 A N2 DG 19 A DG 19 1_555 A O4 DT 21 A DT 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DG MISPAIR' hydrog35 A N2 DG 19 A DG 19 1_555 A O6 DG 22 A DG 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C6 H16 N5 O 1' _chem_comp.formula_weight 174.224 _chem_comp.id AAR _chem_comp.mon_nstd_flag n _chem_comp.name ARGININEAMIDE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA AAR sing 1 n n N H AAR sing 2 n n N H2 AAR sing 3 n n CA CB AAR sing 4 n n CA C AAR sing 5 n n CA HA AAR sing 6 n n CB CG AAR sing 7 n n CB HB2 AAR sing 8 n n CB HB3 AAR sing 9 n n CG CD AAR sing 10 n n CG HG2 AAR sing 11 n n CG HG3 AAR sing 12 n n CD NE AAR sing 13 n n CD HD2 AAR sing 14 n n CD HD3 AAR sing 15 n n NE CZ AAR sing 16 n n NE HE AAR sing 17 n n CZ NH1 AAR sing 18 n n CZ NH2 AAR doub 19 n n NH1 HH11 AAR sing 20 n n NH1 HH12 AAR sing 21 n n NH2 HH21 AAR sing 22 n n NH2 HH22 AAR sing 23 n n C O AAR doub 24 n n C NT AAR sing 25 n n NT HNT1 AAR sing 26 n n NT HNT2 AAR sing 27 n n # _atom_sites.entry_id 2ARG _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id AAR _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 31 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id AAR _pdbx_nonpoly_scheme.auth_mon_id ARM _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N AAR . . . B 2 6.219 -4.282 6.316 1 0.5 ? N AAR 31 A 1 HETATM 2 C CA AAR . . . B 2 5.572 -2.986 6.15 1 0.5 ? CA AAR 31 A 1 HETATM 3 C CB AAR . . . B 2 4.7 -3.03 4.832 1 0.42 ? CB AAR 31 A 1 HETATM 4 C CG AAR . . . B 2 3.987 -1.689 4.374 1 0.43 ? CG AAR 31 A 1 HETATM 5 C CD AAR . . . B 2 3.075 -1.753 3.107 1 0.4 ? CD AAR 31 A 1 HETATM 6 N NE AAR . . . B 2 3.821 -2.228 1.915 1 0.31 ? NE AAR 31 A 1 HETATM 7 C CZ AAR . . . B 2 3.388 -2.993 0.893 1 0.25 ? CZ AAR 31 A 1 HETATM 8 N NH1 AAR . . . B 2 2.171 -3.488 0.801 1 0.29 ? NH1 AAR 31 A 1 HETATM 9 N NH2 AAR . . . B 2 4.218 -3.282 -0.094 1 0.24 ? NH2 AAR 31 A 1 HETATM 10 C C AAR . . . B 2 4.75 -2.662 7.422 1 0.66 ? C AAR 31 A 1 HETATM 11 O O AAR . . . B 2 4.488 -1.5 7.739 1 0.86 ? O AAR 31 A 1 HETATM 12 N NT AAR . . . B 2 4.305 -3.625 8.221 1 0.89 ? NT AAR 31 A 1 HETATM 13 H H2 AAR . . . B 2 5.826 -5.092 5.928 1 0.86 ? H2 AAR 31 A 1 HETATM 14 H H AAR . . . B 2 7.053 -4.352 6.826 1 0.83 ? H AAR 31 A 1 HETATM 15 H HA AAR . . . B 2 6.358 -2.255 6.039 1 0.5 ? HA AAR 31 A 1 HETATM 16 H HB2 AAR . . . B 2 3.954 -3.798 4.97 1 0.46 ? HB2 AAR 31 A 1 HETATM 17 H HB3 AAR . . . B 2 5.358 -3.341 4.033 1 0.37 ? HB3 AAR 31 A 1 HETATM 18 H HG2 AAR . . . B 2 4.75 -0.947 4.192 1 0.44 ? HG2 AAR 31 A 1 HETATM 19 H HG3 AAR . . . B 2 3.356 -1.342 5.179 1 0.5 ? HG3 AAR 31 A 1 HETATM 20 H HD2 AAR . . . B 2 2.725 -0.746 2.94 1 0.45 ? HD2 AAR 31 A 1 HETATM 21 H HD3 AAR . . . B 2 2.193 -2.34 3.316 1 0.42 ? HD3 AAR 31 A 1 HETATM 22 H HE AAR . . . B 2 4.754 -1.933 1.862 1 0.34 ? HE AAR 31 A 1 HETATM 23 H HH11 AAR . . . B 2 1.515 -3.326 1.538 1 0.39 ? HH11 AAR 31 A 1 HETATM 24 H HH12 AAR . . . B 2 1.895 -4.027 0.005 1 0.3 ? HH12 AAR 31 A 1 HETATM 25 H HH21 AAR . . . B 2 5.164 -2.958 -0.094 1 0.31 ? HH21 AAR 31 A 1 HETATM 26 H HH22 AAR . . . B 2 3.909 -3.83 -0.871 1 0.26 ? HH22 AAR 31 A 1 HETATM 27 H HNT1 AAR . . . B 2 3.785 -3.377 9.014 1 1 ? HNT1 AAR 31 A 1 HETATM 28 H HNT2 AAR . . . B 2 4.493 -4.565 8.016 1 1.1 ? HNT2 AAR 31 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 4 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 2119 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #