data_2ART # _model_server_result.job_id mMOcNFwrOcELhB-jEnX6dg _model_server_result.datetime_utc '2025-03-04 22:30:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2art # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 2ART # _exptl.entry_id 2ART _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 347.221 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ADENOSINE MONOPHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.1 _cell.angle_gamma 90 _cell.entry_id 2ART _cell.length_a 108.459 _cell.length_b 62.715 _cell.length_c 46.408 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ART _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C O2 LPA . A LPA 301 1_555 D P AMP . A AMP 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.647 ? metalc ? metalc1 A OG1 THR 137 A THR 137 1_555 B MG MG . A MG 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.708 ? metalc ? metalc2 A OD1 ASP 138 A ASP 138 1_555 B MG MG . A MG 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.743 ? metalc ? metalc3 A N ALA 149 A ALA 149 1_555 B MG MG . A MG 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.747 ? metalc ? metalc4 A O ALA 149 A ALA 149 1_555 B MG MG . A MG 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.057 ? metalc ? metalc5 D O2P AMP . A AMP 302 1_555 B MG MG . A MG 1301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.086 ? # _chem_comp.formula 'C10 H14 N5 O7 P' _chem_comp.formula_weight 347.221 _chem_comp.id AMP _chem_comp.mon_nstd_flag . _chem_comp.name 'ADENOSINE MONOPHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P AMP doub 13 n n P O2P AMP sing 14 n n P O3P AMP sing 15 n n P O5' AMP sing 16 n n O2P HOP2 AMP sing 17 n n O3P HOP3 AMP sing 18 n n O5' C5' AMP sing 19 n n C5' C4' AMP sing 20 n n C5' "H5'1" AMP sing 21 n n C5' "H5'2" AMP sing 22 n n C4' O4' AMP sing 23 n n C4' C3' AMP sing 24 n n C4' H4' AMP sing 25 n n O4' C1' AMP sing 26 n n C3' O3' AMP sing 27 n n C3' C2' AMP sing 28 n n C3' H3' AMP sing 29 n n O3' HO3' AMP sing 30 n n C2' O2' AMP sing 31 n n C2' C1' AMP sing 32 n n C2' H2' AMP sing 33 n n O2' HO2' AMP sing 34 n n C1' N9 AMP sing 35 n n C1' H1' AMP sing 36 n n N9 C8 AMP sing 37 n y N9 C4 AMP sing 38 n y C8 N7 AMP doub 39 n y C8 H8 AMP sing 40 n n N7 C5 AMP sing 41 n y C5 C6 AMP sing 42 n y C5 C4 AMP doub 43 n y C6 N6 AMP sing 44 n n C6 N1 AMP doub 45 n y N6 HN61 AMP sing 46 n n N6 HN62 AMP sing 47 n n N1 C2 AMP sing 48 n y C2 N3 AMP doub 49 n y C2 H2 AMP sing 50 n n N3 C4 AMP sing 51 n y # _atom_sites.entry_id 2ART _atom_sites.fract_transf_matrix[1][1] 0.00922 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003557 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015945 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023096 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 1301 1301 MG MG . C 3 LPA A 1 301 301 LPA LMP . D 4 AMP A 1 302 301 AMP LMP . E 5 HOH A 1 1302 1 HOH TIP . E 5 HOH A 2 1303 2 HOH TIP . E 5 HOH A 3 1304 3 HOH TIP . E 5 HOH A 4 1305 4 HOH TIP . E 5 HOH A 5 1306 5 HOH TIP . E 5 HOH A 6 1307 6 HOH TIP . E 5 HOH A 7 1308 7 HOH TIP . E 5 HOH A 8 1309 8 HOH TIP . E 5 HOH A 9 1310 9 HOH TIP . E 5 HOH A 10 1311 10 HOH TIP . E 5 HOH A 11 1312 11 HOH TIP . E 5 HOH A 12 1313 12 HOH TIP . E 5 HOH A 13 1314 13 HOH TIP . E 5 HOH A 14 1315 14 HOH TIP . E 5 HOH A 15 1316 15 HOH TIP . E 5 HOH A 16 1317 16 HOH TIP . E 5 HOH A 17 1318 17 HOH TIP . E 5 HOH A 18 1319 18 HOH TIP . E 5 HOH A 19 1320 19 HOH TIP . E 5 HOH A 20 1321 20 HOH TIP . E 5 HOH A 21 1322 21 HOH TIP . E 5 HOH A 22 1323 22 HOH TIP . E 5 HOH A 23 1324 23 HOH TIP . E 5 HOH A 24 1325 24 HOH TIP . E 5 HOH A 25 1326 25 HOH TIP . E 5 HOH A 26 1327 26 HOH TIP . E 5 HOH A 27 1328 27 HOH TIP . E 5 HOH A 28 1329 28 HOH TIP . E 5 HOH A 29 1330 29 HOH TIP . E 5 HOH A 30 1331 30 HOH TIP . E 5 HOH A 31 1332 31 HOH TIP . E 5 HOH A 32 1333 32 HOH TIP . E 5 HOH A 33 1334 33 HOH TIP . E 5 HOH A 34 1335 34 HOH TIP . E 5 HOH A 35 1336 35 HOH TIP . E 5 HOH A 36 1337 36 HOH TIP . E 5 HOH A 37 1338 37 HOH TIP . E 5 HOH A 38 1339 38 HOH TIP . E 5 HOH A 39 1340 39 HOH TIP . E 5 HOH A 40 1341 40 HOH TIP . E 5 HOH A 41 1342 41 HOH TIP . E 5 HOH A 42 1343 42 HOH TIP . E 5 HOH A 43 1344 43 HOH TIP . E 5 HOH A 44 1345 44 HOH TIP . E 5 HOH A 45 1346 45 HOH TIP . E 5 HOH A 46 1347 46 HOH TIP . E 5 HOH A 47 1348 47 HOH TIP . E 5 HOH A 48 1349 48 HOH TIP . E 5 HOH A 49 1350 49 HOH TIP . E 5 HOH A 50 1351 50 HOH TIP . E 5 HOH A 51 1352 51 HOH TIP . E 5 HOH A 52 1353 52 HOH TIP . E 5 HOH A 53 1354 53 HOH TIP . E 5 HOH A 54 1355 54 HOH TIP . E 5 HOH A 55 1356 55 HOH TIP . E 5 HOH A 56 1357 56 HOH TIP . E 5 HOH A 57 1358 57 HOH TIP . E 5 HOH A 58 1359 58 HOH TIP . E 5 HOH A 59 1360 59 HOH TIP . E 5 HOH A 60 1361 60 HOH TIP . E 5 HOH A 61 1362 61 HOH TIP . E 5 HOH A 62 1363 62 HOH TIP . E 5 HOH A 63 1364 63 HOH TIP . E 5 HOH A 64 1365 64 HOH TIP . E 5 HOH A 65 1366 65 HOH TIP . E 5 HOH A 66 1367 66 HOH TIP . E 5 HOH A 67 1368 67 HOH TIP . E 5 HOH A 68 1369 68 HOH TIP . E 5 HOH A 69 1370 69 HOH TIP . E 5 HOH A 70 1371 70 HOH TIP . E 5 HOH A 71 1372 71 HOH TIP . E 5 HOH A 72 1373 72 HOH TIP . E 5 HOH A 73 1374 73 HOH TIP . E 5 HOH A 74 1375 74 HOH TIP . E 5 HOH A 75 1376 75 HOH TIP . E 5 HOH A 76 1377 76 HOH TIP . E 5 HOH A 77 1378 77 HOH TIP . E 5 HOH A 78 1379 78 HOH TIP . E 5 HOH A 79 1380 79 HOH TIP . E 5 HOH A 80 1381 80 HOH TIP . E 5 HOH A 81 1382 81 HOH TIP . E 5 HOH A 82 1383 82 HOH TIP . E 5 HOH A 83 1384 83 HOH TIP . E 5 HOH A 84 1385 84 HOH TIP . E 5 HOH A 85 1386 85 HOH TIP . E 5 HOH A 86 1387 86 HOH TIP . E 5 HOH A 87 1388 87 HOH TIP . E 5 HOH A 88 1389 88 HOH TIP . E 5 HOH A 89 1390 89 HOH TIP . E 5 HOH A 90 1391 90 HOH TIP . E 5 HOH A 91 1392 92 HOH TIP . E 5 HOH A 92 1393 93 HOH TIP . E 5 HOH A 93 1394 94 HOH TIP . E 5 HOH A 94 1395 95 HOH TIP . E 5 HOH A 95 1396 96 HOH TIP . E 5 HOH A 96 1397 97 HOH TIP . E 5 HOH A 97 1398 98 HOH TIP . E 5 HOH A 98 1399 99 HOH TIP . E 5 HOH A 99 1400 100 HOH TIP . E 5 HOH A 100 1401 101 HOH TIP . E 5 HOH A 101 1402 102 HOH TIP . E 5 HOH A 102 1403 103 HOH TIP . E 5 HOH A 103 1404 104 HOH TIP . E 5 HOH A 104 1405 105 HOH TIP . E 5 HOH A 105 1406 107 HOH TIP . E 5 HOH A 106 1407 108 HOH TIP . E 5 HOH A 107 1408 109 HOH TIP . E 5 HOH A 108 1409 106 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P AMP . . . D 4 10.822 30.85 25.759 1 16.68 ? P AMP 302 A 1 HETATM 2 O O1P AMP . . . D 4 10.657 32.295 25.62 1 17.82 ? O1P AMP 302 A 1 HETATM 3 O O2P AMP . . . D 4 11.955 30.299 24.824 1 14.95 ? O2P AMP 302 A 1 HETATM 4 O O5' AMP . . . D 4 9.456 30.141 25.304 1 19.87 ? O5' AMP 302 A 1 HETATM 5 C C5' AMP . . . D 4 8.74 29.456 26.225 1 18.15 ? C5' AMP 302 A 1 HETATM 6 C C4' AMP . . . D 4 7.896 28.283 25.857 1 20.39 ? C4' AMP 302 A 1 HETATM 7 O O4' AMP . . . D 4 8.499 27.03 26.164 1 20.46 ? O4' AMP 302 A 1 HETATM 8 C C3' AMP . . . D 4 6.568 28.214 26.588 1 20.58 ? C3' AMP 302 A 1 HETATM 9 O O3' AMP . . . D 4 5.405 29.015 26.445 1 19.05 ? O3' AMP 302 A 1 HETATM 10 C C2' AMP . . . D 4 6.178 26.811 26.354 1 20.22 ? C2' AMP 302 A 1 HETATM 11 O O2' AMP . . . D 4 5.586 26.546 25.051 1 19.51 ? O2' AMP 302 A 1 HETATM 12 C C1' AMP . . . D 4 7.482 26.022 26.505 1 19.87 ? C1' AMP 302 A 1 HETATM 13 N N9 AMP . . . D 4 7.917 25.612 27.847 1 17.9 ? N9 AMP 302 A 1 HETATM 14 C C8 AMP . . . D 4 7.368 25.803 29.077 1 16.24 ? C8 AMP 302 A 1 HETATM 15 N N7 AMP . . . D 4 8.079 25.279 30.018 1 18.07 ? N7 AMP 302 A 1 HETATM 16 C C5 AMP . . . D 4 9.16 24.698 29.476 1 17.45 ? C5 AMP 302 A 1 HETATM 17 C C6 AMP . . . D 4 10.29 23.989 29.877 1 15.69 ? C6 AMP 302 A 1 HETATM 18 N N6 AMP . . . D 4 10.417 23.783 31.153 1 18.65 ? N6 AMP 302 A 1 HETATM 19 N N1 AMP . . . D 4 11.22 23.535 28.983 1 15.62 ? N1 AMP 302 A 1 HETATM 20 C C2 AMP . . . D 4 11.118 23.739 27.627 1 12.64 ? C2 AMP 302 A 1 HETATM 21 N N3 AMP . . . D 4 10.059 24.409 27.211 1 15.13 ? N3 AMP 302 A 1 HETATM 22 C C4 AMP . . . D 4 9.074 24.902 28.049 1 16.47 ? C4 AMP 302 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 22 #