data_2ARZ # _model_server_result.job_id Y8kibR2AyDO4crAC1MBN9Q _model_server_result.datetime_utc '2024-10-10 17:16:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2arz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":2647}' # _entry.id 2ARZ # _exptl.entry_id 2ARZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ARZ _cell.length_a 71.272 _cell.length_b 79.775 _cell.length_c 99.612 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ARZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 2ARZ _atom_sites.fract_transf_matrix[1][1] 0.014031 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012535 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010039 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 401 401 CL CL . D 2 CL A 1 501 501 CL CL . E 2 CL A 1 601 601 CL CL . F 3 GOL A 1 2647 2647 GOL GOL . G 3 GOL A 1 2648 2648 GOL GOL . H 4 HOH A 1 2649 3 HOH HOH . H 4 HOH A 2 2650 8 HOH HOH . H 4 HOH A 3 2651 9 HOH HOH . H 4 HOH A 4 2652 10 HOH HOH . H 4 HOH A 5 2653 11 HOH HOH . H 4 HOH A 6 2654 14 HOH HOH . H 4 HOH A 7 2655 16 HOH HOH . H 4 HOH A 8 2656 23 HOH HOH . H 4 HOH A 9 2657 24 HOH HOH . H 4 HOH A 10 2658 27 HOH HOH . H 4 HOH A 11 2659 34 HOH HOH . H 4 HOH A 12 2660 35 HOH HOH . H 4 HOH A 13 2661 36 HOH HOH . H 4 HOH A 14 2662 38 HOH HOH . H 4 HOH A 15 2663 39 HOH HOH . H 4 HOH A 16 2664 42 HOH HOH . H 4 HOH A 17 2665 44 HOH HOH . H 4 HOH A 18 2666 48 HOH HOH . H 4 HOH A 19 2667 49 HOH HOH . H 4 HOH A 20 2668 51 HOH HOH . H 4 HOH A 21 2669 55 HOH HOH . H 4 HOH A 22 2670 56 HOH HOH . H 4 HOH A 23 2671 60 HOH HOH . H 4 HOH A 24 2672 64 HOH HOH . H 4 HOH A 25 2673 66 HOH HOH . H 4 HOH A 26 2674 74 HOH HOH . H 4 HOH A 27 2675 77 HOH HOH . H 4 HOH A 28 2676 80 HOH HOH . H 4 HOH A 29 2677 84 HOH HOH . H 4 HOH A 30 2678 85 HOH HOH . H 4 HOH A 31 2679 86 HOH HOH . H 4 HOH A 32 2680 87 HOH HOH . H 4 HOH A 33 2681 91 HOH HOH . H 4 HOH A 34 2682 93 HOH HOH . H 4 HOH A 35 2683 95 HOH HOH . H 4 HOH A 36 2684 97 HOH HOH . H 4 HOH A 37 2685 104 HOH HOH . H 4 HOH A 38 2686 106 HOH HOH . H 4 HOH A 39 2687 110 HOH HOH . H 4 HOH A 40 2688 111 HOH HOH . H 4 HOH A 41 2689 112 HOH HOH . H 4 HOH A 42 2690 119 HOH HOH . H 4 HOH A 43 2691 120 HOH HOH . H 4 HOH A 44 2692 121 HOH HOH . H 4 HOH A 45 2693 122 HOH HOH . H 4 HOH A 46 2694 123 HOH HOH . H 4 HOH A 47 2695 126 HOH HOH . H 4 HOH A 48 2696 127 HOH HOH . H 4 HOH A 49 2697 128 HOH HOH . H 4 HOH A 50 2698 129 HOH HOH . H 4 HOH A 51 2699 134 HOH HOH . H 4 HOH A 52 2700 135 HOH HOH . H 4 HOH A 53 2701 136 HOH HOH . H 4 HOH A 54 2702 139 HOH HOH . H 4 HOH A 55 2703 142 HOH HOH . H 4 HOH A 56 2704 144 HOH HOH . H 4 HOH A 57 2705 145 HOH HOH . H 4 HOH A 58 2706 146 HOH HOH . H 4 HOH A 59 2707 147 HOH HOH . H 4 HOH A 60 2708 149 HOH HOH . H 4 HOH A 61 2709 151 HOH HOH . H 4 HOH A 62 2710 152 HOH HOH . H 4 HOH A 63 2711 153 HOH HOH . H 4 HOH A 64 2712 156 HOH HOH . H 4 HOH A 65 2713 158 HOH HOH . H 4 HOH A 66 2714 161 HOH HOH . H 4 HOH A 67 2715 163 HOH HOH . H 4 HOH A 68 2716 164 HOH HOH . H 4 HOH A 69 2717 168 HOH HOH . H 4 HOH A 70 2718 170 HOH HOH . H 4 HOH A 71 2719 171 HOH HOH . H 4 HOH A 72 2720 172 HOH HOH . H 4 HOH A 73 2721 174 HOH HOH . H 4 HOH A 74 2722 175 HOH HOH . H 4 HOH A 75 2723 177 HOH HOH . H 4 HOH A 76 2724 181 HOH HOH . H 4 HOH A 77 2725 184 HOH HOH . H 4 HOH A 78 2726 185 HOH HOH . H 4 HOH A 79 2727 186 HOH HOH . H 4 HOH A 80 2728 189 HOH HOH . H 4 HOH A 81 2729 190 HOH HOH . H 4 HOH A 82 2730 192 HOH HOH . H 4 HOH A 83 2731 194 HOH HOH . H 4 HOH A 84 2732 195 HOH HOH . H 4 HOH A 85 2733 196 HOH HOH . H 4 HOH A 86 2734 197 HOH HOH . H 4 HOH A 87 2735 198 HOH HOH . H 4 HOH A 88 2736 202 HOH HOH . H 4 HOH A 89 2737 203 HOH HOH . H 4 HOH A 90 2738 206 HOH HOH . H 4 HOH A 91 2739 207 HOH HOH . H 4 HOH A 92 2740 211 HOH HOH . H 4 HOH A 93 2741 213 HOH HOH . H 4 HOH A 94 2742 215 HOH HOH . H 4 HOH A 95 2743 218 HOH HOH . H 4 HOH A 96 2744 219 HOH HOH . H 4 HOH A 97 2745 221 HOH HOH . H 4 HOH A 98 2746 222 HOH HOH . H 4 HOH A 99 2747 223 HOH HOH . H 4 HOH A 100 2748 224 HOH HOH . H 4 HOH A 101 2749 225 HOH HOH . H 4 HOH A 102 2750 226 HOH HOH . H 4 HOH A 103 2751 229 HOH HOH . H 4 HOH A 104 2752 230 HOH HOH . H 4 HOH A 105 2753 231 HOH HOH . H 4 HOH A 106 2754 233 HOH HOH . H 4 HOH A 107 2755 234 HOH HOH . H 4 HOH A 108 2756 235 HOH HOH . H 4 HOH A 109 2757 236 HOH HOH . H 4 HOH A 110 2758 237 HOH HOH . H 4 HOH A 111 2759 239 HOH HOH . H 4 HOH A 112 2760 240 HOH HOH . H 4 HOH A 113 2761 242 HOH HOH . H 4 HOH A 114 2762 243 HOH HOH . H 4 HOH A 115 2763 249 HOH HOH . H 4 HOH A 116 2764 250 HOH HOH . H 4 HOH A 117 2765 251 HOH HOH . H 4 HOH A 118 2766 252 HOH HOH . H 4 HOH A 119 2767 255 HOH HOH . H 4 HOH A 120 2768 258 HOH HOH . H 4 HOH A 121 2769 261 HOH HOH . H 4 HOH A 122 2770 262 HOH HOH . H 4 HOH A 123 2771 263 HOH HOH . H 4 HOH A 124 2772 266 HOH HOH . H 4 HOH A 125 2773 269 HOH HOH . H 4 HOH A 126 2774 271 HOH HOH . H 4 HOH A 127 2775 272 HOH HOH . H 4 HOH A 128 2776 273 HOH HOH . H 4 HOH A 129 2777 274 HOH HOH . H 4 HOH A 130 2778 277 HOH HOH . H 4 HOH A 131 2779 278 HOH HOH . H 4 HOH A 132 2780 281 HOH HOH . H 4 HOH A 133 2781 282 HOH HOH . H 4 HOH A 134 2782 288 HOH HOH . H 4 HOH A 135 2783 289 HOH HOH . H 4 HOH A 136 2784 290 HOH HOH . H 4 HOH A 137 2785 291 HOH HOH . H 4 HOH A 138 2786 292 HOH HOH . H 4 HOH A 139 2787 295 HOH HOH . H 4 HOH A 140 2788 298 HOH HOH . H 4 HOH A 141 2789 303 HOH HOH . H 4 HOH A 142 2790 307 HOH HOH . H 4 HOH A 143 2791 308 HOH HOH . H 4 HOH A 144 2792 311 HOH HOH . H 4 HOH A 145 2793 313 HOH HOH . H 4 HOH A 146 2794 314 HOH HOH . H 4 HOH A 147 2795 316 HOH HOH . H 4 HOH A 148 2796 317 HOH HOH . H 4 HOH A 149 2797 318 HOH HOH . H 4 HOH A 150 2798 319 HOH HOH . H 4 HOH A 151 2799 320 HOH HOH . H 4 HOH A 152 2800 321 HOH HOH . H 4 HOH A 153 2801 322 HOH HOH . H 4 HOH A 154 2802 325 HOH HOH . I 4 HOH B 1 245 2 HOH HOH . I 4 HOH B 2 246 5 HOH HOH . I 4 HOH B 3 247 6 HOH HOH . I 4 HOH B 4 248 7 HOH HOH . I 4 HOH B 5 249 12 HOH HOH . I 4 HOH B 6 250 13 HOH HOH . I 4 HOH B 7 251 15 HOH HOH . I 4 HOH B 8 252 17 HOH HOH . I 4 HOH B 9 253 18 HOH HOH . I 4 HOH B 10 254 19 HOH HOH . I 4 HOH B 11 255 20 HOH HOH . I 4 HOH B 12 256 21 HOH HOH . I 4 HOH B 13 257 22 HOH HOH . I 4 HOH B 14 258 25 HOH HOH . I 4 HOH B 15 259 26 HOH HOH . I 4 HOH B 16 260 28 HOH HOH . I 4 HOH B 17 261 29 HOH HOH . I 4 HOH B 18 262 30 HOH HOH . I 4 HOH B 19 263 31 HOH HOH . I 4 HOH B 20 264 32 HOH HOH . I 4 HOH B 21 265 33 HOH HOH . I 4 HOH B 22 266 37 HOH HOH . I 4 HOH B 23 267 40 HOH HOH . I 4 HOH B 24 268 41 HOH HOH . I 4 HOH B 25 269 43 HOH HOH . I 4 HOH B 26 270 45 HOH HOH . I 4 HOH B 27 271 46 HOH HOH . I 4 HOH B 28 272 47 HOH HOH . I 4 HOH B 29 273 50 HOH HOH . I 4 HOH B 30 274 53 HOH HOH . I 4 HOH B 31 275 54 HOH HOH . I 4 HOH B 32 276 57 HOH HOH . I 4 HOH B 33 277 58 HOH HOH . I 4 HOH B 34 278 61 HOH HOH . I 4 HOH B 35 279 62 HOH HOH . I 4 HOH B 36 280 63 HOH HOH . I 4 HOH B 37 281 65 HOH HOH . I 4 HOH B 38 282 67 HOH HOH . I 4 HOH B 39 283 68 HOH HOH . I 4 HOH B 40 284 69 HOH HOH . I 4 HOH B 41 285 70 HOH HOH . I 4 HOH B 42 286 71 HOH HOH . I 4 HOH B 43 287 73 HOH HOH . I 4 HOH B 44 288 75 HOH HOH . I 4 HOH B 45 289 76 HOH HOH . I 4 HOH B 46 290 78 HOH HOH . I 4 HOH B 47 291 79 HOH HOH . I 4 HOH B 48 292 81 HOH HOH . I 4 HOH B 49 293 82 HOH HOH . I 4 HOH B 50 294 83 HOH HOH . I 4 HOH B 51 295 88 HOH HOH . I 4 HOH B 52 296 89 HOH HOH . I 4 HOH B 53 297 90 HOH HOH . I 4 HOH B 54 298 92 HOH HOH . I 4 HOH B 55 299 94 HOH HOH . I 4 HOH B 56 300 96 HOH HOH . I 4 HOH B 57 301 98 HOH HOH . I 4 HOH B 58 302 99 HOH HOH . I 4 HOH B 59 303 100 HOH HOH . I 4 HOH B 60 304 102 HOH HOH . I 4 HOH B 61 305 103 HOH HOH . I 4 HOH B 62 306 105 HOH HOH . I 4 HOH B 63 307 107 HOH HOH . I 4 HOH B 64 308 108 HOH HOH . I 4 HOH B 65 309 109 HOH HOH . I 4 HOH B 66 310 114 HOH HOH . I 4 HOH B 67 311 115 HOH HOH . I 4 HOH B 68 312 116 HOH HOH . I 4 HOH B 69 313 117 HOH HOH . I 4 HOH B 70 314 118 HOH HOH . I 4 HOH B 71 315 124 HOH HOH . I 4 HOH B 72 316 125 HOH HOH . I 4 HOH B 73 317 131 HOH HOH . I 4 HOH B 74 318 132 HOH HOH . I 4 HOH B 75 319 133 HOH HOH . I 4 HOH B 76 320 137 HOH HOH . I 4 HOH B 77 321 138 HOH HOH . I 4 HOH B 78 322 140 HOH HOH . I 4 HOH B 79 323 141 HOH HOH . I 4 HOH B 80 324 143 HOH HOH . I 4 HOH B 81 325 150 HOH HOH . I 4 HOH B 82 326 154 HOH HOH . I 4 HOH B 83 327 155 HOH HOH . I 4 HOH B 84 328 157 HOH HOH . I 4 HOH B 85 329 159 HOH HOH . I 4 HOH B 86 330 162 HOH HOH . I 4 HOH B 87 331 165 HOH HOH . I 4 HOH B 88 332 166 HOH HOH . I 4 HOH B 89 333 167 HOH HOH . I 4 HOH B 90 334 169 HOH HOH . I 4 HOH B 91 335 176 HOH HOH . I 4 HOH B 92 336 178 HOH HOH . I 4 HOH B 93 337 179 HOH HOH . I 4 HOH B 94 338 180 HOH HOH . I 4 HOH B 95 339 182 HOH HOH . I 4 HOH B 96 340 183 HOH HOH . I 4 HOH B 97 341 187 HOH HOH . I 4 HOH B 98 342 188 HOH HOH . I 4 HOH B 99 343 191 HOH HOH . I 4 HOH B 100 344 193 HOH HOH . I 4 HOH B 101 345 199 HOH HOH . I 4 HOH B 102 346 200 HOH HOH . I 4 HOH B 103 347 201 HOH HOH . I 4 HOH B 104 348 204 HOH HOH . I 4 HOH B 105 349 205 HOH HOH . I 4 HOH B 106 350 208 HOH HOH . I 4 HOH B 107 351 209 HOH HOH . I 4 HOH B 108 352 210 HOH HOH . I 4 HOH B 109 353 212 HOH HOH . I 4 HOH B 110 354 214 HOH HOH . I 4 HOH B 111 355 216 HOH HOH . I 4 HOH B 112 356 217 HOH HOH . I 4 HOH B 113 357 220 HOH HOH . I 4 HOH B 114 358 227 HOH HOH . I 4 HOH B 115 359 228 HOH HOH . I 4 HOH B 116 360 232 HOH HOH . I 4 HOH B 117 361 238 HOH HOH . I 4 HOH B 118 362 244 HOH HOH . I 4 HOH B 119 363 247 HOH HOH . I 4 HOH B 120 364 248 HOH HOH . I 4 HOH B 121 365 253 HOH HOH . I 4 HOH B 122 366 254 HOH HOH . I 4 HOH B 123 367 256 HOH HOH . I 4 HOH B 124 368 257 HOH HOH . I 4 HOH B 125 369 259 HOH HOH . I 4 HOH B 126 370 260 HOH HOH . I 4 HOH B 127 371 264 HOH HOH . I 4 HOH B 128 372 265 HOH HOH . I 4 HOH B 129 373 267 HOH HOH . I 4 HOH B 130 374 270 HOH HOH . I 4 HOH B 131 375 275 HOH HOH . I 4 HOH B 132 376 276 HOH HOH . I 4 HOH B 133 377 279 HOH HOH . I 4 HOH B 134 378 280 HOH HOH . I 4 HOH B 135 379 283 HOH HOH . I 4 HOH B 136 380 285 HOH HOH . I 4 HOH B 137 381 286 HOH HOH . I 4 HOH B 138 382 287 HOH HOH . I 4 HOH B 139 383 293 HOH HOH . I 4 HOH B 140 384 294 HOH HOH . I 4 HOH B 141 385 296 HOH HOH . I 4 HOH B 142 386 297 HOH HOH . I 4 HOH B 143 387 299 HOH HOH . I 4 HOH B 144 388 301 HOH HOH . I 4 HOH B 145 389 306 HOH HOH . I 4 HOH B 146 390 309 HOH HOH . I 4 HOH B 147 391 310 HOH HOH . I 4 HOH B 148 392 323 HOH HOH . I 4 HOH B 149 393 324 HOH HOH . I 4 HOH B 150 394 326 HOH HOH . I 4 HOH B 151 395 327 HOH HOH . I 4 HOH B 152 396 328 HOH HOH . I 4 HOH B 153 397 329 HOH HOH . I 4 HOH B 154 398 330 HOH HOH . I 4 HOH B 155 399 331 HOH HOH . I 4 HOH B 156 400 332 HOH HOH . I 4 HOH B 157 401 333 HOH HOH . I 4 HOH B 158 402 334 HOH HOH . I 4 HOH B 159 403 335 HOH HOH . I 4 HOH B 160 404 336 HOH HOH . I 4 HOH B 161 405 337 HOH HOH . I 4 HOH B 162 406 338 HOH HOH . I 4 HOH B 163 407 339 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . F 3 23.435 42.409 39.59 1 52.31 ? C1 GOL 2647 A 1 HETATM 2 O O1 GOL . . . F 3 24.135 42.561 38.364 1 49.75 ? O1 GOL 2647 A 1 HETATM 3 C C2 GOL . . . F 3 22.092 41.704 39.41 1 51.29 ? C2 GOL 2647 A 1 HETATM 4 O O2 GOL . . . F 3 21.177 42.11 40.407 1 48.65 ? O2 GOL 2647 A 1 HETATM 5 C C3 GOL . . . F 3 22.361 40.23 39.589 1 51.55 ? C3 GOL 2647 A 1 HETATM 6 O O3 GOL . . . F 3 21.242 39.598 40.175 1 51.95 ? O3 GOL 2647 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #