data_2ATF # _model_server_result.job_id ikPXHa-zfI_S4fkPPiAivg _model_server_result.datetime_utc '2024-11-27 04:27:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2atf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":234}' # _entry.id 2ATF # _exptl.entry_id 2ATF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ATF _cell.length_a 57.55 _cell.length_b 57.55 _cell.length_c 122.076 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ATF _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 72 A LEU 72 1_555 A N MSE 73 A MSE 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale2 A C MSE 73 A MSE 73 1_555 A N ILE 74 A ILE 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale3 A C GLU 116 A GLU 116 1_555 A N MSE 117 A MSE 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C MSE 117 A MSE 117 1_555 A N ILE 118 A ILE 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale5 A C THR 178 A THR 178 1_555 A N MSE 179 A MSE 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? covale ? covale6 A C MSE 179 A MSE 179 1_555 A N THR 180 A THR 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? metalc ? metalc1 A NE2 HIS 86 A HIS 86 1_555 B NI NI . A NI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc2 A NE2 HIS 88 A HIS 88 1_555 B NI NI . A NI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc3 A NE2 HIS 140 A HIS 140 1_555 B NI NI . A NI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc4 B NI NI . A NI 201 1_555 D O HOH . A HOH 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc5 B NI NI . A NI 201 1_555 D O HOH . A HOH 360 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc6 B NI NI . A NI 201 1_555 D O HOH . A HOH 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 2ATF _atom_sites.fract_transf_matrix[1][1] 0.017376 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017376 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008192 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NI A 1 201 1 NI NI . C 3 EDO A 1 234 234 EDO EDO . D 4 HOH A 1 235 2 HOH HOH . D 4 HOH A 2 236 3 HOH HOH . D 4 HOH A 3 237 4 HOH HOH . D 4 HOH A 4 238 5 HOH HOH . D 4 HOH A 5 239 6 HOH HOH . D 4 HOH A 6 240 7 HOH HOH . D 4 HOH A 7 241 8 HOH HOH . D 4 HOH A 8 242 9 HOH HOH . D 4 HOH A 9 243 10 HOH HOH . D 4 HOH A 10 244 11 HOH HOH . D 4 HOH A 11 245 12 HOH HOH . D 4 HOH A 12 246 13 HOH HOH . D 4 HOH A 13 247 14 HOH HOH . D 4 HOH A 14 248 15 HOH HOH . D 4 HOH A 15 249 16 HOH HOH . D 4 HOH A 16 250 17 HOH HOH . D 4 HOH A 17 251 18 HOH HOH . D 4 HOH A 18 252 19 HOH HOH . D 4 HOH A 19 253 20 HOH HOH . D 4 HOH A 20 254 21 HOH HOH . D 4 HOH A 21 255 22 HOH HOH . D 4 HOH A 22 256 23 HOH HOH . D 4 HOH A 23 257 24 HOH HOH . D 4 HOH A 24 258 25 HOH HOH . D 4 HOH A 25 259 26 HOH HOH . D 4 HOH A 26 260 27 HOH HOH . D 4 HOH A 27 261 28 HOH HOH . D 4 HOH A 28 262 29 HOH HOH . D 4 HOH A 29 263 30 HOH HOH . D 4 HOH A 30 264 31 HOH HOH . D 4 HOH A 31 265 32 HOH HOH . D 4 HOH A 32 266 33 HOH HOH . D 4 HOH A 33 267 34 HOH HOH . D 4 HOH A 34 268 35 HOH HOH . D 4 HOH A 35 269 36 HOH HOH . D 4 HOH A 36 270 37 HOH HOH . D 4 HOH A 37 271 38 HOH HOH . D 4 HOH A 38 272 39 HOH HOH . D 4 HOH A 39 273 41 HOH HOH . D 4 HOH A 40 274 42 HOH HOH . D 4 HOH A 41 275 43 HOH HOH . D 4 HOH A 42 276 44 HOH HOH . D 4 HOH A 43 277 46 HOH HOH . D 4 HOH A 44 278 47 HOH HOH . D 4 HOH A 45 279 48 HOH HOH . D 4 HOH A 46 280 49 HOH HOH . D 4 HOH A 47 281 50 HOH HOH . D 4 HOH A 48 282 51 HOH HOH . D 4 HOH A 49 283 53 HOH HOH . D 4 HOH A 50 284 54 HOH HOH . D 4 HOH A 51 285 55 HOH HOH . D 4 HOH A 52 286 56 HOH HOH . D 4 HOH A 53 287 57 HOH HOH . D 4 HOH A 54 288 58 HOH HOH . D 4 HOH A 55 289 59 HOH HOH . D 4 HOH A 56 290 60 HOH HOH . D 4 HOH A 57 291 61 HOH HOH . D 4 HOH A 58 292 62 HOH HOH . D 4 HOH A 59 293 63 HOH HOH . D 4 HOH A 60 294 64 HOH HOH . D 4 HOH A 61 295 65 HOH HOH . D 4 HOH A 62 296 66 HOH HOH . D 4 HOH A 63 297 67 HOH HOH . D 4 HOH A 64 298 69 HOH HOH . D 4 HOH A 65 299 70 HOH HOH . D 4 HOH A 66 300 71 HOH HOH . D 4 HOH A 67 301 73 HOH HOH . D 4 HOH A 68 302 74 HOH HOH . D 4 HOH A 69 303 75 HOH HOH . D 4 HOH A 70 304 76 HOH HOH . D 4 HOH A 71 305 77 HOH HOH . D 4 HOH A 72 306 78 HOH HOH . D 4 HOH A 73 307 79 HOH HOH . D 4 HOH A 74 308 81 HOH HOH . D 4 HOH A 75 309 82 HOH HOH . D 4 HOH A 76 310 83 HOH HOH . D 4 HOH A 77 311 84 HOH HOH . D 4 HOH A 78 312 85 HOH HOH . D 4 HOH A 79 313 88 HOH HOH . D 4 HOH A 80 314 89 HOH HOH . D 4 HOH A 81 315 90 HOH HOH . D 4 HOH A 82 316 91 HOH HOH . D 4 HOH A 83 317 92 HOH HOH . D 4 HOH A 84 318 93 HOH HOH . D 4 HOH A 85 319 94 HOH HOH . D 4 HOH A 86 320 95 HOH HOH . D 4 HOH A 87 321 96 HOH HOH . D 4 HOH A 88 322 98 HOH HOH . D 4 HOH A 89 323 100 HOH HOH . D 4 HOH A 90 324 101 HOH HOH . D 4 HOH A 91 325 102 HOH HOH . D 4 HOH A 92 326 103 HOH HOH . D 4 HOH A 93 327 104 HOH HOH . D 4 HOH A 94 328 105 HOH HOH . D 4 HOH A 95 329 107 HOH HOH . D 4 HOH A 96 330 111 HOH HOH . D 4 HOH A 97 331 112 HOH HOH . D 4 HOH A 98 332 113 HOH HOH . D 4 HOH A 99 333 114 HOH HOH . D 4 HOH A 100 334 115 HOH HOH . D 4 HOH A 101 335 116 HOH HOH . D 4 HOH A 102 336 117 HOH HOH . D 4 HOH A 103 337 120 HOH HOH . D 4 HOH A 104 338 124 HOH HOH . D 4 HOH A 105 339 125 HOH HOH . D 4 HOH A 106 340 126 HOH HOH . D 4 HOH A 107 341 127 HOH HOH . D 4 HOH A 108 342 129 HOH HOH . D 4 HOH A 109 343 130 HOH HOH . D 4 HOH A 110 344 134 HOH HOH . D 4 HOH A 111 345 135 HOH HOH . D 4 HOH A 112 346 137 HOH HOH . D 4 HOH A 113 347 143 HOH HOH . D 4 HOH A 114 348 144 HOH HOH . D 4 HOH A 115 349 146 HOH HOH . D 4 HOH A 116 350 147 HOH HOH . D 4 HOH A 117 351 151 HOH HOH . D 4 HOH A 118 352 152 HOH HOH . D 4 HOH A 119 353 154 HOH HOH . D 4 HOH A 120 354 155 HOH HOH . D 4 HOH A 121 355 156 HOH HOH . D 4 HOH A 122 356 157 HOH HOH . D 4 HOH A 123 357 158 HOH HOH . D 4 HOH A 124 358 159 HOH HOH . D 4 HOH A 125 359 160 HOH HOH . D 4 HOH A 126 360 161 HOH HOH . D 4 HOH A 127 361 162 HOH HOH . D 4 HOH A 128 362 163 HOH HOH . D 4 HOH A 129 363 164 HOH HOH . D 4 HOH A 130 364 165 HOH HOH . D 4 HOH A 131 365 166 HOH HOH . D 4 HOH A 132 366 167 HOH HOH . D 4 HOH A 133 367 168 HOH HOH . D 4 HOH A 134 368 169 HOH HOH . D 4 HOH A 135 369 170 HOH HOH . D 4 HOH A 136 370 171 HOH HOH . D 4 HOH A 137 371 172 HOH HOH . D 4 HOH A 138 372 173 HOH HOH . D 4 HOH A 139 373 174 HOH HOH . D 4 HOH A 140 374 175 HOH HOH . D 4 HOH A 141 375 176 HOH HOH . D 4 HOH A 142 376 177 HOH HOH . D 4 HOH A 143 377 178 HOH HOH . D 4 HOH A 144 378 179 HOH HOH . D 4 HOH A 145 379 180 HOH HOH . D 4 HOH A 146 380 181 HOH HOH . D 4 HOH A 147 381 182 HOH HOH . D 4 HOH A 148 382 183 HOH HOH . D 4 HOH A 149 383 184 HOH HOH . D 4 HOH A 150 384 185 HOH HOH . D 4 HOH A 151 385 186 HOH HOH . D 4 HOH A 152 386 187 HOH HOH . D 4 HOH A 153 387 188 HOH HOH . D 4 HOH A 154 388 189 HOH HOH . D 4 HOH A 155 389 191 HOH HOH . D 4 HOH A 156 390 192 HOH HOH . D 4 HOH A 157 391 193 HOH HOH . D 4 HOH A 158 392 194 HOH HOH . D 4 HOH A 159 393 197 HOH HOH . D 4 HOH A 160 394 198 HOH HOH . D 4 HOH A 161 395 199 HOH HOH . D 4 HOH A 162 396 201 HOH HOH . D 4 HOH A 163 397 203 HOH HOH . D 4 HOH A 164 398 204 HOH HOH . D 4 HOH A 165 399 205 HOH HOH . D 4 HOH A 166 400 206 HOH HOH . D 4 HOH A 167 401 207 HOH HOH . D 4 HOH A 168 402 208 HOH HOH . D 4 HOH A 169 403 210 HOH HOH . D 4 HOH A 170 404 211 HOH HOH . D 4 HOH A 171 405 213 HOH HOH . D 4 HOH A 172 406 214 HOH HOH . D 4 HOH A 173 407 215 HOH HOH . D 4 HOH A 174 408 216 HOH HOH . D 4 HOH A 175 409 217 HOH HOH . D 4 HOH A 176 410 218 HOH HOH . D 4 HOH A 177 411 219 HOH HOH . D 4 HOH A 178 412 220 HOH HOH . D 4 HOH A 179 413 222 HOH HOH . D 4 HOH A 180 414 224 HOH HOH . D 4 HOH A 181 415 225 HOH HOH . D 4 HOH A 182 416 226 HOH HOH . D 4 HOH A 183 417 227 HOH HOH . D 4 HOH A 184 418 228 HOH HOH . D 4 HOH A 185 419 230 HOH HOH . D 4 HOH A 186 420 231 HOH HOH . D 4 HOH A 187 421 232 HOH HOH . D 4 HOH A 188 422 233 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 -5.896 10.928 53.837 1 39.81 ? C1 EDO 234 A 1 HETATM 2 O O1 EDO . . . C 3 -5.381 10.375 52.627 1 41.74 ? O1 EDO 234 A 1 HETATM 3 C C2 EDO . . . C 3 -7.02 11.856 53.418 1 36.47 ? C2 EDO 234 A 1 HETATM 4 O O2 EDO . . . C 3 -6.78 12.184 52.056 1 33.7 ? O2 EDO 234 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #