data_2ATV # _model_server_result.job_id M6XVdCdWulv2jTRg9V5uug _model_server_result.datetime_utc '2025-02-05 16:53:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2atv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":175}' # _entry.id 2ATV # _exptl.entry_id 2ATV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ATV _cell.length_a 76.405 _cell.length_b 76.405 _cell.length_c 107.876 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ATV _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 42 A SER 20 1_555 B MG MG . A MG 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? metalc ? metalc2 B MG MG . A MG 175 1_555 C O3B GDP . A GDP 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc3 B MG MG . A MG 175 1_555 D O HOH . A HOH 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc4 B MG MG . A MG 175 1_555 D O HOH . A HOH 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc5 B MG MG . A MG 175 1_555 D O HOH . A HOH 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc6 B MG MG . A MG 175 1_555 D O HOH . A HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2ATV _atom_sites.fract_transf_matrix[1][1] 0.013088 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013088 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00927 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 175 1 MG MG . C 3 GDP A 1 415 415 GDP GDP . D 4 HOH A 1 416 3 HOH HOH . D 4 HOH A 2 417 5 HOH HOH . D 4 HOH A 3 418 6 HOH HOH . D 4 HOH A 4 419 9 HOH HOH . D 4 HOH A 5 420 10 HOH HOH . D 4 HOH A 6 421 11 HOH HOH . D 4 HOH A 7 422 12 HOH HOH . D 4 HOH A 8 423 13 HOH HOH . D 4 HOH A 9 424 16 HOH HOH . D 4 HOH A 10 425 17 HOH HOH . D 4 HOH A 11 426 18 HOH HOH . D 4 HOH A 12 427 19 HOH HOH . D 4 HOH A 13 428 20 HOH HOH . D 4 HOH A 14 429 22 HOH HOH . D 4 HOH A 15 430 23 HOH HOH . D 4 HOH A 16 431 24 HOH HOH . D 4 HOH A 17 432 25 HOH HOH . D 4 HOH A 18 433 26 HOH HOH . D 4 HOH A 19 434 27 HOH HOH . D 4 HOH A 20 435 28 HOH HOH . D 4 HOH A 21 436 29 HOH HOH . D 4 HOH A 22 437 30 HOH HOH . D 4 HOH A 23 438 31 HOH HOH . D 4 HOH A 24 439 33 HOH HOH . D 4 HOH A 25 440 34 HOH HOH . D 4 HOH A 26 441 36 HOH HOH . D 4 HOH A 27 442 37 HOH HOH . D 4 HOH A 28 443 38 HOH HOH . D 4 HOH A 29 444 39 HOH HOH . D 4 HOH A 30 445 40 HOH HOH . D 4 HOH A 31 446 41 HOH HOH . D 4 HOH A 32 447 42 HOH HOH . D 4 HOH A 33 448 44 HOH HOH . D 4 HOH A 34 449 45 HOH HOH . D 4 HOH A 35 450 46 HOH HOH . D 4 HOH A 36 451 47 HOH HOH . D 4 HOH A 37 452 48 HOH HOH . D 4 HOH A 38 453 49 HOH HOH . D 4 HOH A 39 454 50 HOH HOH . D 4 HOH A 40 455 51 HOH HOH . D 4 HOH A 41 456 52 HOH HOH . D 4 HOH A 42 457 54 HOH HOH . D 4 HOH A 43 458 56 HOH HOH . D 4 HOH A 44 459 58 HOH HOH . D 4 HOH A 45 460 59 HOH HOH . D 4 HOH A 46 461 60 HOH HOH . D 4 HOH A 47 462 61 HOH HOH . D 4 HOH A 48 463 62 HOH HOH . D 4 HOH A 49 464 64 HOH HOH . D 4 HOH A 50 465 65 HOH HOH . D 4 HOH A 51 466 66 HOH HOH . D 4 HOH A 52 467 67 HOH HOH . D 4 HOH A 53 468 69 HOH HOH . D 4 HOH A 54 469 70 HOH HOH . D 4 HOH A 55 470 73 HOH HOH . D 4 HOH A 56 471 76 HOH HOH . D 4 HOH A 57 472 77 HOH HOH . D 4 HOH A 58 473 78 HOH HOH . D 4 HOH A 59 474 79 HOH HOH . D 4 HOH A 60 475 80 HOH HOH . D 4 HOH A 61 476 82 HOH HOH . D 4 HOH A 62 477 85 HOH HOH . D 4 HOH A 63 478 86 HOH HOH . D 4 HOH A 64 479 88 HOH HOH . D 4 HOH A 65 480 89 HOH HOH . D 4 HOH A 66 481 94 HOH HOH . D 4 HOH A 67 482 95 HOH HOH . D 4 HOH A 68 483 98 HOH HOH . D 4 HOH A 69 484 99 HOH HOH . D 4 HOH A 70 485 102 HOH HOH . D 4 HOH A 71 486 103 HOH HOH . D 4 HOH A 72 487 106 HOH HOH . D 4 HOH A 73 488 108 HOH HOH . D 4 HOH A 74 489 109 HOH HOH . D 4 HOH A 75 490 110 HOH HOH . D 4 HOH A 76 491 111 HOH HOH . D 4 HOH A 77 492 112 HOH HOH . D 4 HOH A 78 493 116 HOH HOH . D 4 HOH A 79 494 117 HOH HOH . D 4 HOH A 80 495 130 HOH HOH . D 4 HOH A 81 496 132 HOH HOH . D 4 HOH A 82 497 134 HOH HOH . D 4 HOH A 83 498 136 HOH HOH . D 4 HOH A 84 499 137 HOH HOH . D 4 HOH A 85 500 138 HOH HOH . D 4 HOH A 86 501 139 HOH HOH . D 4 HOH A 87 502 140 HOH HOH . D 4 HOH A 88 503 141 HOH HOH . D 4 HOH A 89 504 142 HOH HOH . D 4 HOH A 90 505 143 HOH HOH . D 4 HOH A 91 506 144 HOH HOH . D 4 HOH A 92 507 145 HOH HOH . D 4 HOH A 93 508 146 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 15.198 _atom_site.Cartn_y 20.03 _atom_site.Cartn_z 7.769 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.06 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 175 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #