data_2AV8 # _model_server_result.job_id tJ2wXDHIV23st0kh0uv8iw _model_server_result.datetime_utc '2025-02-05 17:58:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2av8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 2AV8 # _exptl.entry_id 2AV8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2AV8 _cell.length_a 136.5 _cell.length_b 136.5 _cell.length_c 109.6 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2AV8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 69 A GLU 69 1_555 C FE FE2 . A FE2 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.96 ? metalc ? metalc2 A OD1 ASP 84 A ASP 84 1_555 D FE1 FEO . A FEO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc3 A OE1 GLU 115 A GLU 115 1_555 D FE1 FEO . A FEO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc4 A OE2 GLU 115 A GLU 115 1_555 D FE2 FEO . A FEO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc5 A ND1 HIS 118 A HIS 118 1_555 D FE1 FEO . A FEO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc6 A OE2 GLU 204 A GLU 204 1_555 D FE2 FEO . A FEO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc7 A OE2 GLU 238 A GLU 238 1_555 D FE2 FEO . A FEO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc8 A ND1 HIS 241 A HIS 241 1_555 D FE2 FEO . A FEO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? metalc ? metalc9 D FE2 FEO . A FEO 401 1_555 F O HOH . A HOH 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.501 ? metalc ? metalc10 D FE1 FEO . A FEO 401 1_555 F O HOH . A HOH 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? metalc ? metalc11 C FE FE2 . A FE2 402 1_555 F O HOH . A HOH 1243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc12 C FE FE2 . A FE2 402 1_555 F O HOH . A HOH 1276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc13 C FE FE2 . A FE2 402 1_555 F O HOH . A HOH 1338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc14 C FE FE2 . A FE2 402 1_555 B OE2 GLU 69 B GLU 69 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? metalc ? metalc15 B OD1 ASP 84 B ASP 84 1_555 E FE1 FEO . B FEO 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc16 B OE1 GLU 115 B GLU 115 1_555 E FE1 FEO . B FEO 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? metalc ? metalc17 B OE2 GLU 115 B GLU 115 1_555 E FE2 FEO . B FEO 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc18 B ND1 HIS 118 B HIS 118 1_555 E FE1 FEO . B FEO 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc19 B OE2 GLU 204 B GLU 204 1_555 E FE2 FEO . B FEO 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc20 B OE1 GLU 238 B GLU 238 1_555 E FE2 FEO . B FEO 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc21 B ND1 HIS 241 B HIS 241 1_555 E FE2 FEO . B FEO 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc22 E FE1 FEO . B FEO 403 1_555 G O HOH . B HOH 1204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.936 ? # _chem_comp.formula 'Fe 2' _chem_comp.formula_weight 55.845 _chem_comp.id FE2 _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2AV8 _atom_sites.fract_transf_matrix[1][1] 0.007326 _atom_sites.fract_transf_matrix[1][2] 0.00423 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008459 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009124 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FE2 A 1 402 402 FE2 FE2 . D 3 FEO A 1 401 401 FEO FEO . E 3 FEO B 1 403 403 FEO FEO . F 4 HOH A 1 1003 1003 HOH HOH . F 4 HOH A 2 1004 1004 HOH HOH . F 4 HOH A 3 1007 1007 HOH HOH . F 4 HOH A 4 1008 1008 HOH HOH . F 4 HOH A 5 1009 1009 HOH HOH . F 4 HOH A 6 1012 1012 HOH HOH . F 4 HOH A 7 1014 1014 HOH HOH . F 4 HOH A 8 1017 1017 HOH HOH . F 4 HOH A 9 1018 1018 HOH HOH . F 4 HOH A 10 1019 1019 HOH HOH . F 4 HOH A 11 1021 1021 HOH HOH . F 4 HOH A 12 1024 1024 HOH HOH . F 4 HOH A 13 1025 1025 HOH HOH . F 4 HOH A 14 1027 1027 HOH HOH . F 4 HOH A 15 1028 1028 HOH HOH . F 4 HOH A 16 1029 1029 HOH HOH . F 4 HOH A 17 1032 1032 HOH HOH . F 4 HOH A 18 1035 1035 HOH HOH . F 4 HOH A 19 1036 1036 HOH HOH . F 4 HOH A 20 1040 1040 HOH HOH . F 4 HOH A 21 1043 1043 HOH HOH . F 4 HOH A 22 1045 1045 HOH HOH . F 4 HOH A 23 1047 1047 HOH HOH . F 4 HOH A 24 1049 1049 HOH HOH . F 4 HOH A 25 1051 1051 HOH HOH . F 4 HOH A 26 1052 1052 HOH HOH . F 4 HOH A 27 1060 1060 HOH HOH . F 4 HOH A 28 1061 1061 HOH HOH . F 4 HOH A 29 1062 1062 HOH HOH . F 4 HOH A 30 1067 1067 HOH HOH . F 4 HOH A 31 1069 1069 HOH HOH . F 4 HOH A 32 1070 1070 HOH HOH . F 4 HOH A 33 1071 1071 HOH HOH . F 4 HOH A 34 1074 1074 HOH HOH . F 4 HOH A 35 1075 1075 HOH HOH . F 4 HOH A 36 1077 1077 HOH HOH . F 4 HOH A 37 1079 1079 HOH HOH . F 4 HOH A 38 1080 1080 HOH HOH . F 4 HOH A 39 1083 1083 HOH HOH . F 4 HOH A 40 1084 1084 HOH HOH . F 4 HOH A 41 1087 1087 HOH HOH . F 4 HOH A 42 1088 1088 HOH HOH . F 4 HOH A 43 1089 1089 HOH HOH . F 4 HOH A 44 1091 1091 HOH HOH . F 4 HOH A 45 1094 1094 HOH HOH . F 4 HOH A 46 1095 1095 HOH HOH . F 4 HOH A 47 1096 1096 HOH HOH . F 4 HOH A 48 1099 1099 HOH HOH . F 4 HOH A 49 1103 1103 HOH HOH . F 4 HOH A 50 1106 1106 HOH HOH . F 4 HOH A 51 1107 1107 HOH HOH . F 4 HOH A 52 1109 1109 HOH HOH . F 4 HOH A 53 1112 1112 HOH HOH . F 4 HOH A 54 1201 1201 HOH HOH . F 4 HOH A 55 1202 1202 HOH HOH . F 4 HOH A 56 1205 1205 HOH HOH . F 4 HOH A 57 1208 1208 HOH HOH . F 4 HOH A 58 1209 1209 HOH HOH . F 4 HOH A 59 1211 1211 HOH HOH . F 4 HOH A 60 1213 1213 HOH HOH . F 4 HOH A 61 1216 1216 HOH HOH . F 4 HOH A 62 1219 1219 HOH HOH . F 4 HOH A 63 1221 1221 HOH HOH . F 4 HOH A 64 1223 1223 HOH HOH . F 4 HOH A 65 1227 1227 HOH HOH . F 4 HOH A 66 1230 1230 HOH HOH . F 4 HOH A 67 1233 1233 HOH HOH . F 4 HOH A 68 1234 1234 HOH HOH . F 4 HOH A 69 1238 1238 HOH HOH . F 4 HOH A 70 1239 1239 HOH HOH . F 4 HOH A 71 1240 1240 HOH HOH . F 4 HOH A 72 1243 1243 HOH HOH . F 4 HOH A 73 1244 1244 HOH HOH . F 4 HOH A 74 1246 1246 HOH HOH . F 4 HOH A 75 1247 1247 HOH HOH . F 4 HOH A 76 1248 1248 HOH HOH . F 4 HOH A 77 1249 1249 HOH HOH . F 4 HOH A 78 1258 1258 HOH HOH . F 4 HOH A 79 1259 1259 HOH HOH . F 4 HOH A 80 1265 1265 HOH HOH . F 4 HOH A 81 1267 1267 HOH HOH . F 4 HOH A 82 1270 1270 HOH HOH . F 4 HOH A 83 1274 1274 HOH HOH . F 4 HOH A 84 1276 1276 HOH HOH . F 4 HOH A 85 1277 1277 HOH HOH . F 4 HOH A 86 1280 1280 HOH HOH . F 4 HOH A 87 1281 1281 HOH HOH . F 4 HOH A 88 1282 1282 HOH HOH . F 4 HOH A 89 1283 1283 HOH HOH . F 4 HOH A 90 1286 1286 HOH HOH . F 4 HOH A 91 1287 1287 HOH HOH . F 4 HOH A 92 1301 1301 HOH HOH . F 4 HOH A 93 1303 1303 HOH HOH . F 4 HOH A 94 1304 1304 HOH HOH . F 4 HOH A 95 1305 1305 HOH HOH . F 4 HOH A 96 1306 1306 HOH HOH . F 4 HOH A 97 1307 1307 HOH HOH . F 4 HOH A 98 1311 1311 HOH HOH . F 4 HOH A 99 1312 1312 HOH HOH . F 4 HOH A 100 1313 1313 HOH HOH . F 4 HOH A 101 1314 1314 HOH HOH . F 4 HOH A 102 1315 1315 HOH HOH . F 4 HOH A 103 1316 1316 HOH HOH . F 4 HOH A 104 1317 1317 HOH HOH . F 4 HOH A 105 1318 1318 HOH HOH . F 4 HOH A 106 1319 1319 HOH HOH . F 4 HOH A 107 1320 1320 HOH HOH . F 4 HOH A 108 1325 1325 HOH HOH . F 4 HOH A 109 1326 1326 HOH HOH . F 4 HOH A 110 1327 1327 HOH HOH . F 4 HOH A 111 1331 1331 HOH HOH . F 4 HOH A 112 1334 1334 HOH HOH . F 4 HOH A 113 1335 1335 HOH HOH . F 4 HOH A 114 1338 1338 HOH HOH . F 4 HOH A 115 1339 1339 HOH HOH . G 4 HOH B 1 1001 1001 HOH HOH . G 4 HOH B 2 1002 1002 HOH HOH . G 4 HOH B 3 1005 1005 HOH HOH . G 4 HOH B 4 1006 1006 HOH HOH . G 4 HOH B 5 1010 1010 HOH HOH . G 4 HOH B 6 1011 1011 HOH HOH . G 4 HOH B 7 1013 1013 HOH HOH . G 4 HOH B 8 1015 1015 HOH HOH . G 4 HOH B 9 1016 1016 HOH HOH . G 4 HOH B 10 1022 1022 HOH HOH . G 4 HOH B 11 1023 1023 HOH HOH . G 4 HOH B 12 1026 1026 HOH HOH . G 4 HOH B 13 1030 1030 HOH HOH . G 4 HOH B 14 1031 1031 HOH HOH . G 4 HOH B 15 1034 1034 HOH HOH . G 4 HOH B 16 1037 1037 HOH HOH . G 4 HOH B 17 1038 1038 HOH HOH . G 4 HOH B 18 1039 1039 HOH HOH . G 4 HOH B 19 1042 1042 HOH HOH . G 4 HOH B 20 1044 1044 HOH HOH . G 4 HOH B 21 1046 1046 HOH HOH . G 4 HOH B 22 1050 1050 HOH HOH . G 4 HOH B 23 1054 1054 HOH HOH . G 4 HOH B 24 1055 1055 HOH HOH . G 4 HOH B 25 1056 1056 HOH HOH . G 4 HOH B 26 1063 1063 HOH HOH . G 4 HOH B 27 1064 1064 HOH HOH . G 4 HOH B 28 1066 1066 HOH HOH . G 4 HOH B 29 1068 1068 HOH HOH . G 4 HOH B 30 1072 1072 HOH HOH . G 4 HOH B 31 1078 1078 HOH HOH . G 4 HOH B 32 1082 1082 HOH HOH . G 4 HOH B 33 1085 1085 HOH HOH . G 4 HOH B 34 1092 1092 HOH HOH . G 4 HOH B 35 1098 1098 HOH HOH . G 4 HOH B 36 1111 1111 HOH HOH . G 4 HOH B 37 1114 1114 HOH HOH . G 4 HOH B 38 1115 1115 HOH HOH . G 4 HOH B 39 1116 1116 HOH HOH . G 4 HOH B 40 1203 1203 HOH HOH . G 4 HOH B 41 1204 1204 HOH HOH . G 4 HOH B 42 1206 1206 HOH HOH . G 4 HOH B 43 1207 1207 HOH HOH . G 4 HOH B 44 1215 1215 HOH HOH . G 4 HOH B 45 1217 1217 HOH HOH . G 4 HOH B 46 1218 1218 HOH HOH . G 4 HOH B 47 1220 1220 HOH HOH . G 4 HOH B 48 1224 1224 HOH HOH . G 4 HOH B 49 1225 1225 HOH HOH . G 4 HOH B 50 1226 1226 HOH HOH . G 4 HOH B 51 1229 1229 HOH HOH . G 4 HOH B 52 1231 1231 HOH HOH . G 4 HOH B 53 1236 1236 HOH HOH . G 4 HOH B 54 1242 1242 HOH HOH . G 4 HOH B 55 1251 1251 HOH HOH . G 4 HOH B 56 1252 1252 HOH HOH . G 4 HOH B 57 1253 1253 HOH HOH . G 4 HOH B 58 1254 1254 HOH HOH . G 4 HOH B 59 1257 1257 HOH HOH . G 4 HOH B 60 1260 1260 HOH HOH . G 4 HOH B 61 1261 1261 HOH HOH . G 4 HOH B 62 1262 1262 HOH HOH . G 4 HOH B 63 1263 1263 HOH HOH . G 4 HOH B 64 1264 1264 HOH HOH . G 4 HOH B 65 1268 1268 HOH HOH . G 4 HOH B 66 1269 1269 HOH HOH . G 4 HOH B 67 1273 1273 HOH HOH . G 4 HOH B 68 1275 1275 HOH HOH . G 4 HOH B 69 1279 1279 HOH HOH . G 4 HOH B 70 1285 1285 HOH HOH . G 4 HOH B 71 1290 1290 HOH HOH . G 4 HOH B 72 1291 1291 HOH HOH . G 4 HOH B 73 1292 1292 HOH HOH . G 4 HOH B 74 1293 1293 HOH HOH . G 4 HOH B 75 1302 1302 HOH HOH . G 4 HOH B 76 1308 1308 HOH HOH . G 4 HOH B 77 1309 1309 HOH HOH . G 4 HOH B 78 1310 1310 HOH HOH . G 4 HOH B 79 1321 1321 HOH HOH . G 4 HOH B 80 1322 1322 HOH HOH . G 4 HOH B 81 1323 1323 HOH HOH . G 4 HOH B 82 1324 1324 HOH HOH . G 4 HOH B 83 1328 1328 HOH HOH . G 4 HOH B 84 1329 1329 HOH HOH . G 4 HOH B 85 1330 1330 HOH HOH . G 4 HOH B 86 1332 1332 HOH HOH . G 4 HOH B 87 1333 1333 HOH HOH . G 4 HOH B 88 1336 1336 HOH HOH . G 4 HOH B 89 1337 1337 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE2 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 60.932 _atom_site.Cartn_y 40.468 _atom_site.Cartn_z -1.951 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 44.85 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE2 _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #