data_2AVH # _model_server_result.job_id mJJoEiRzzCoUvU992lGM4g _model_server_result.datetime_utc '2024-11-01 01:34:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2avh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":14}' # _entry.id 2AVH # _exptl.entry_id 2AVH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2AVH _cell.length_a 29.932 _cell.length_b 37.112 _cell.length_c 43.653 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2AVH _symmetry.cell_setting ? _symmetry.Int_Tables_number 21 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_565 -x+1/2,-y+3/2,z -1 0 0 0 -1 0 0 0 1 14.966 55.668 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O6 DG 1 A DG 1 6_565 B K K . A K 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.691 ? metalc ? metalc2 A O6 DG 2 A DG 2 6_565 B K K . A K 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.015 ? metalc ? metalc3 A O6 DG 2 A DG 2 1_555 C K K . A K 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.868 ? metalc ? metalc4 A O6 DG 2 A DG 2 6_565 C K K . A K 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.782 ? metalc ? metalc5 A O6 DG 3 A DG 3 1_555 B K K . A K 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.885 ? metalc ? metalc6 A O6 DG 3 A DG 3 1_555 C K K . A K 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.69 ? metalc ? metalc7 A O6 DG 3 A DG 3 6_565 C K K . A K 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.075 ? metalc ? metalc8 A O6 DG 4 A DG 4 1_555 B K K . A K 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.731 ? metalc ? metalc9 A O6 DG 8 A DG 8 1_555 B K K . A K 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.797 ? metalc ? metalc10 A N2 DG 8 A DG 8 6_565 E K K . A K 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.7 ? metalc ? metalc11 A O6 DG 9 A DG 9 1_555 B K K . A K 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.908 ? metalc ? metalc12 A O6 DG 9 A DG 9 1_555 C K K . A K 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.759 ? metalc ? metalc13 A O6 DG 9 A DG 9 6_565 C K K . A K 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.957 ? metalc ? metalc14 A O6 DG 10 A DG 10 6_565 B K K . A K 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.081 ? metalc ? metalc15 A O6 DG 10 A DG 10 1_555 C K K . A K 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.858 ? metalc ? metalc16 A O6 DG 10 A DG 10 6_565 C K K . A K 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.95 ? metalc ? metalc17 A N2 DG 10 A DG 10 1_555 E K K . A K 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.681 ? metalc ? metalc18 A O6 DG 11 A DG 11 6_565 B K K . A K 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? metalc ? metalc19 B K K . A K 12 1_555 C K K . A K 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.311 ? metalc ? metalc20 B K K . A K 12 1_555 C K K . A K 13 6_565 ? ? ? ? ? ? ? ? ? ? ? ? 3.579 ? metalc ? metalc21 D K K . A K 14 1_555 F O HOH . A HOH 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.779 ? metalc ? metalc22 D K K . A K 14 1_555 F O HOH . A HOH 55 4_575 ? ? ? ? ? ? ? ? ? ? ? ? 3.646 ? metalc ? metalc23 E K K . A K 15 1_555 F O HOH . A HOH 25 6_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.67 ? hydrog TYPE_6_PAIR hydrog1 A N7 DG 1 A DG 1 1_555 A N2 DG 11 A DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog2 A O6 DG 1 A DG 1 1_555 A N1 DG 11 A DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog3 A N1 DG 2 A DG 2 1_555 A O6 DG 10 A DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog4 A N2 DG 2 A DG 2 1_555 A N7 DG 10 A DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog5 A N7 DG 3 A DG 3 1_555 A N2 DG 9 A DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog6 A O6 DG 3 A DG 3 1_555 A N1 DG 9 A DG 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog7 A N1 DG 4 A DG 4 1_555 A O6 DG 8 A DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_6_PAIR hydrog8 A N2 DG 4 A DG 4 1_555 A N7 DG 8 A DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2AVH _atom_sites.fract_transf_matrix[1][1] 0.03341 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02695 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02291 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K A 1 12 12 K K . C 2 K A 1 13 13 K K . D 2 K A 1 14 14 K K . E 2 K A 1 15 15 K K . F 3 HOH A 1 16 16 HOH HOH . F 3 HOH A 2 17 17 HOH HOH . F 3 HOH A 3 18 18 HOH HOH . F 3 HOH A 4 19 19 HOH HOH . F 3 HOH A 5 20 20 HOH HOH . F 3 HOH A 6 21 21 HOH HOH . F 3 HOH A 7 22 22 HOH HOH . F 3 HOH A 8 23 23 HOH HOH . F 3 HOH A 9 24 24 HOH HOH . F 3 HOH A 10 25 25 HOH HOH . F 3 HOH A 11 26 26 HOH HOH . F 3 HOH A 12 27 27 HOH HOH . F 3 HOH A 13 28 28 HOH HOH . F 3 HOH A 14 29 29 HOH HOH . F 3 HOH A 15 30 30 HOH HOH . F 3 HOH A 16 31 31 HOH HOH . F 3 HOH A 17 32 32 HOH HOH . F 3 HOH A 18 33 33 HOH HOH . F 3 HOH A 19 34 34 HOH HOH . F 3 HOH A 20 35 35 HOH HOH . F 3 HOH A 21 36 36 HOH HOH . F 3 HOH A 22 37 37 HOH HOH . F 3 HOH A 23 38 38 HOH HOH . F 3 HOH A 24 39 39 HOH HOH . F 3 HOH A 25 40 40 HOH HOH . F 3 HOH A 26 41 41 HOH HOH . F 3 HOH A 27 42 42 HOH HOH . F 3 HOH A 28 43 43 HOH HOH . F 3 HOH A 29 44 44 HOH HOH . F 3 HOH A 30 45 45 HOH HOH . F 3 HOH A 31 46 46 HOH HOH . F 3 HOH A 32 47 47 HOH HOH . F 3 HOH A 33 48 48 HOH HOH . F 3 HOH A 34 49 49 HOH HOH . F 3 HOH A 35 50 50 HOH HOH . F 3 HOH A 36 51 51 HOH HOH . F 3 HOH A 37 52 52 HOH HOH . F 3 HOH A 38 53 53 HOH HOH . F 3 HOH A 39 54 54 HOH HOH . F 3 HOH A 40 55 55 HOH HOH . F 3 HOH A 41 56 56 HOH HOH . F 3 HOH A 42 57 57 HOH HOH . F 3 HOH A 43 58 58 HOH HOH . F 3 HOH A 44 59 59 HOH HOH . F 3 HOH A 45 60 60 HOH HOH . F 3 HOH A 46 61 61 HOH HOH . F 3 HOH A 47 62 62 HOH HOH . F 3 HOH A 48 63 63 HOH HOH . F 3 HOH A 49 64 64 HOH HOH . F 3 HOH A 50 65 65 HOH HOH . F 3 HOH A 51 66 66 HOH HOH . F 3 HOH A 52 67 67 HOH HOH . F 3 HOH A 53 68 68 HOH HOH . F 3 HOH A 54 69 69 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 4.089 _atom_site.Cartn_y 35.898 _atom_site.Cartn_z 2.37 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 36.39 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 14 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 219 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #