data_2AVX # _model_server_result.job_id x6esgx4rsT4SPXC0yHdseA _model_server_result.datetime_utc '2024-10-19 17:24:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2avx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":172}' # _entry.id 2AVX # _exptl.entry_id 2AVX _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 227.3 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(2-OXOTETRAHYDROFURAN-3-YL)OCTANAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H21 N O3' _chem_comp.formula_weight 227.3 _chem_comp.id HTF _chem_comp.mon_nstd_flag . _chem_comp.name N-(2-OXOTETRAHYDROFURAN-3-YL)OCTANAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'N-OCTANOYL-L-HOMOSERINE LACTONE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C8 C7 HTF sing 150 n n C8 H81 HTF sing 151 n n C8 H82 HTF sing 152 n n C8 H83 HTF sing 153 n n C7 C6 HTF sing 154 n n C7 H72 HTF sing 155 n n C7 H73 HTF sing 156 n n C6 C5 HTF sing 157 n n C6 H62 HTF sing 158 n n C6 H63 HTF sing 159 n n C5 C4 HTF sing 160 n n C5 H52 HTF sing 161 n n C5 H53 HTF sing 162 n n C4 C3 HTF sing 163 n n C4 H42 HTF sing 164 n n C4 H43 HTF sing 165 n n C3 C2 HTF sing 166 n n C3 H32 HTF sing 167 n n C3 H33 HTF sing 168 n n C2 C1 HTF sing 169 n n C2 H22 HTF sing 170 n n C2 H23 HTF sing 171 n n C1 O1 HTF doub 172 n n C1 N HTF sing 173 n n N CA HTF sing 174 n n N HN HTF sing 175 n n CA C HTF sing 176 n n CA CB HTF sing 177 n n CA HA HTF sing 178 n n C O HTF doub 179 n n C OD HTF sing 180 n n OD CG HTF sing 181 n n CG CB HTF sing 182 n n CG HG2 HTF sing 183 n n CG HG3 HTF sing 184 n n CB HB2 HTF sing 185 n n CB HB3 HTF sing 186 n n # _atom_sites.entry_id 2AVX _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id HTF _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 172 _pdbx_nonpoly_scheme.auth_seq_num 172 _pdbx_nonpoly_scheme.pdb_mon_id HTF _pdbx_nonpoly_scheme.auth_mon_id HTF _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C8 HTF . . . B 2 -4.137 -9.109 -7.517 1 1.06 ? C8 HTF 172 A 1 HETATM 2 C C7 HTF . . . B 2 -3.523 -7.727 -7.282 1 1.28 ? C7 HTF 172 A 1 HETATM 3 C C6 HTF . . . B 2 -3.16 -7.52 -5.803 1 1.02 ? C6 HTF 172 A 1 HETATM 4 C C5 HTF . . . B 2 -2.855 -6.045 -5.474 1 1.87 ? C5 HTF 172 A 1 HETATM 5 C C4 HTF . . . B 2 -1.673 -5.834 -4.502 1 1.8 ? C4 HTF 172 A 1 HETATM 6 C C3 HTF . . . B 2 -0.362 -5.431 -5.207 1 2.02 ? C3 HTF 172 A 1 HETATM 7 C C2 HTF . . . B 2 0.242 -6.547 -6.077 1 2.36 ? C2 HTF 172 A 1 HETATM 8 C C1 HTF . . . B 2 1.085 -6.038 -7.242 1 2.5 ? C1 HTF 172 A 1 HETATM 9 O O1 HTF . . . B 2 0.544 -5.841 -8.33 1 3.78 ? O1 HTF 172 A 1 HETATM 10 N N HTF . . . B 2 2.393 -5.86 -7.035 1 1.69 ? N HTF 172 A 1 HETATM 11 C CA HTF . . . B 2 3.412 -5.549 -8.057 1 1.88 ? CA HTF 172 A 1 HETATM 12 C C HTF . . . B 2 4.748 -4.99 -7.567 1 2.49 ? C HTF 172 A 1 HETATM 13 O O HTF . . . B 2 5.273 -5.293 -6.497 1 4 ? O HTF 172 A 1 HETATM 14 O OD HTF . . . B 2 5.226 -4.136 -8.455 1 2.52 ? OD HTF 172 A 1 HETATM 15 C CG HTF . . . B 2 4.376 -4.061 -9.584 1 2.42 ? CG HTF 172 A 1 HETATM 16 C CB HTF . . . B 2 3 -4.461 -9.052 1 2.66 ? CB HTF 172 A 1 HETATM 17 H H81 HTF . . . B 2 -3.557 -9.872 -6.999 1 2.17 ? H81 HTF 172 A 1 HETATM 18 H H82 HTF . . . B 2 -4.152 -9.326 -8.586 1 2.01 ? H82 HTF 172 A 1 HETATM 19 H H83 HTF . . . B 2 -5.157 -9.123 -7.138 1 1.58 ? H83 HTF 172 A 1 HETATM 20 H H72 HTF . . . B 2 -2.62 -7.625 -7.887 1 2.44 ? H72 HTF 172 A 1 HETATM 21 H H73 HTF . . . B 2 -4.245 -6.976 -7.598 1 2.5 ? H73 HTF 172 A 1 HETATM 22 H H62 HTF . . . B 2 -3.993 -7.842 -5.185 1 1.89 ? H62 HTF 172 A 1 HETATM 23 H H63 HTF . . . B 2 -2.307 -8.155 -5.561 1 1.7 ? H63 HTF 172 A 1 HETATM 24 H H52 HTF . . . B 2 -2.667 -5.492 -6.393 1 2.88 ? H52 HTF 172 A 1 HETATM 25 H H53 HTF . . . B 2 -3.751 -5.61 -5.029 1 2.94 ? H53 HTF 172 A 1 HETATM 26 H H42 HTF . . . B 2 -1.938 -5.025 -3.819 1 2.61 ? H42 HTF 172 A 1 HETATM 27 H H43 HTF . . . B 2 -1.512 -6.726 -3.894 1 2.03 ? H43 HTF 172 A 1 HETATM 28 H H32 HTF . . . B 2 -0.552 -4.548 -5.818 1 3.11 ? H32 HTF 172 A 1 HETATM 29 H H33 HTF . . . B 2 0.372 -5.144 -4.453 1 2.68 ? H33 HTF 172 A 1 HETATM 30 H H22 HTF . . . B 2 0.845 -7.192 -5.444 1 2.89 ? H22 HTF 172 A 1 HETATM 31 H H23 HTF . . . B 2 -0.543 -7.155 -6.515 1 3.51 ? H23 HTF 172 A 1 HETATM 32 H HN HTF . . . B 2 2.747 -6.184 -6.14 1 1.76 ? HN HTF 172 A 1 HETATM 33 H HA HTF . . . B 2 3.646 -6.46 -8.609 1 3.19 ? HA HTF 172 A 1 HETATM 34 H HG2 HTF . . . B 2 4.362 -3.068 -10.031 1 3.54 ? HG2 HTF 172 A 1 HETATM 35 H HG3 HTF . . . B 2 4.705 -4.795 -10.32 1 2.71 ? HG3 HTF 172 A 1 HETATM 36 H HB2 HTF . . . B 2 2.541 -3.618 -8.534 1 3.39 ? HB2 HTF 172 A 1 HETATM 37 H HB3 HTF . . . B 2 2.359 -4.829 -9.85 1 3.94 ? HB3 HTF 172 A 1 # _model_server_stats.io_time_ms 131 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 64 _model_server_stats.query_time_ms 5664 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 37 #