data_2AY5 # _model_server_result.job_id WFS7tMsSfjeUH9XLnQnnsg _model_server_result.datetime_utc '2024-10-16 10:36:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ay5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":414}' # _entry.id 2AY5 # _exptl.entry_id 2AY5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 189.211 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'INDOLYLPROPIONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2AY5 _cell.length_a 124 _cell.length_b 122.06 _cell.length_c 55.11 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2AY5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 243 A LYS 258 1_555 C C4A PLP . A PLP 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.351 ? covale ? covale2 B NZ LYS 243 B LYS 258 1_555 D C4A PLP . B PLP 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.379 ? # _chem_comp.formula 'C11 H11 N O2' _chem_comp.formula_weight 189.211 _chem_comp.id IOP _chem_comp.mon_nstd_flag . _chem_comp.name 'INDOLYLPROPIONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2AY5 _atom_sites.fract_transf_matrix[1][1] 0.008065 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008193 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018146 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PLP A 1 413 413 PLP PLP . D 2 PLP B 1 413 413 PLP PLP . E 3 IOP B 1 414 414 IOP IOP . F 4 HOH A 1 414 1 HOH HOH . F 4 HOH A 2 415 2 HOH HOH . F 4 HOH A 3 416 3 HOH HOH . F 4 HOH A 4 417 4 HOH HOH . F 4 HOH A 5 418 5 HOH HOH . F 4 HOH A 6 419 6 HOH HOH . F 4 HOH A 7 420 7 HOH HOH . F 4 HOH A 8 421 8 HOH HOH . F 4 HOH A 9 422 9 HOH HOH . F 4 HOH A 10 423 10 HOH HOH . F 4 HOH A 11 424 11 HOH HOH . F 4 HOH A 12 425 12 HOH HOH . F 4 HOH A 13 426 13 HOH HOH . F 4 HOH A 14 427 14 HOH HOH . F 4 HOH A 15 428 15 HOH HOH . F 4 HOH A 16 429 16 HOH HOH . F 4 HOH A 17 430 17 HOH HOH . F 4 HOH A 18 431 18 HOH HOH . F 4 HOH A 19 432 19 HOH HOH . F 4 HOH A 20 433 20 HOH HOH . F 4 HOH A 21 434 21 HOH HOH . F 4 HOH A 22 435 22 HOH HOH . F 4 HOH A 23 436 23 HOH HOH . F 4 HOH A 24 437 24 HOH HOH . F 4 HOH A 25 438 26 HOH HOH . F 4 HOH A 26 439 27 HOH HOH . F 4 HOH A 27 440 28 HOH HOH . F 4 HOH A 28 441 30 HOH HOH . F 4 HOH A 29 442 31 HOH HOH . F 4 HOH A 30 443 32 HOH HOH . F 4 HOH A 31 444 33 HOH HOH . F 4 HOH A 32 445 34 HOH HOH . F 4 HOH A 33 446 35 HOH HOH . F 4 HOH A 34 447 36 HOH HOH . F 4 HOH A 35 448 37 HOH HOH . F 4 HOH A 36 449 38 HOH HOH . F 4 HOH A 37 450 39 HOH HOH . F 4 HOH A 38 451 40 HOH HOH . F 4 HOH A 39 452 41 HOH HOH . F 4 HOH A 40 453 42 HOH HOH . F 4 HOH A 41 454 43 HOH HOH . F 4 HOH A 42 455 44 HOH HOH . F 4 HOH A 43 456 45 HOH HOH . F 4 HOH A 44 457 46 HOH HOH . F 4 HOH A 45 458 47 HOH HOH . F 4 HOH A 46 459 49 HOH HOH . F 4 HOH A 47 460 50 HOH HOH . F 4 HOH A 48 461 51 HOH HOH . F 4 HOH A 49 462 52 HOH HOH . F 4 HOH A 50 463 53 HOH HOH . F 4 HOH A 51 464 54 HOH HOH . F 4 HOH A 52 465 56 HOH HOH . F 4 HOH A 53 466 57 HOH HOH . F 4 HOH A 54 467 58 HOH HOH . F 4 HOH A 55 468 59 HOH HOH . F 4 HOH A 56 469 60 HOH HOH . F 4 HOH A 57 470 61 HOH HOH . F 4 HOH A 58 471 62 HOH HOH . F 4 HOH A 59 472 63 HOH HOH . F 4 HOH A 60 473 64 HOH HOH . F 4 HOH A 61 474 65 HOH HOH . F 4 HOH A 62 475 66 HOH HOH . F 4 HOH A 63 476 67 HOH HOH . F 4 HOH A 64 477 68 HOH HOH . F 4 HOH A 65 478 69 HOH HOH . F 4 HOH A 66 479 70 HOH HOH . F 4 HOH A 67 480 71 HOH HOH . F 4 HOH A 68 481 73 HOH HOH . F 4 HOH A 69 482 74 HOH HOH . F 4 HOH A 70 483 75 HOH HOH . F 4 HOH A 71 484 76 HOH HOH . F 4 HOH A 72 485 78 HOH HOH . F 4 HOH A 73 486 79 HOH HOH . F 4 HOH A 74 487 80 HOH HOH . F 4 HOH A 75 488 81 HOH HOH . F 4 HOH A 76 489 82 HOH HOH . F 4 HOH A 77 490 83 HOH HOH . F 4 HOH A 78 491 84 HOH HOH . F 4 HOH A 79 492 85 HOH HOH . F 4 HOH A 80 493 86 HOH HOH . F 4 HOH A 81 494 87 HOH HOH . F 4 HOH A 82 495 88 HOH HOH . F 4 HOH A 83 496 89 HOH HOH . F 4 HOH A 84 497 90 HOH HOH . F 4 HOH A 85 498 91 HOH HOH . F 4 HOH A 86 499 92 HOH HOH . F 4 HOH A 87 500 93 HOH HOH . F 4 HOH A 88 501 94 HOH HOH . F 4 HOH A 89 502 95 HOH HOH . F 4 HOH A 90 503 97 HOH HOH . F 4 HOH A 91 504 98 HOH HOH . F 4 HOH A 92 505 99 HOH HOH . F 4 HOH A 93 506 100 HOH HOH . F 4 HOH A 94 507 101 HOH HOH . F 4 HOH A 95 508 102 HOH HOH . F 4 HOH A 96 509 103 HOH HOH . F 4 HOH A 97 510 104 HOH HOH . F 4 HOH A 98 511 105 HOH HOH . F 4 HOH A 99 512 106 HOH HOH . F 4 HOH A 100 513 107 HOH HOH . F 4 HOH A 101 514 108 HOH HOH . F 4 HOH A 102 515 109 HOH HOH . F 4 HOH A 103 516 110 HOH HOH . F 4 HOH A 104 517 112 HOH HOH . F 4 HOH A 105 518 113 HOH HOH . F 4 HOH A 106 519 114 HOH HOH . F 4 HOH A 107 520 115 HOH HOH . F 4 HOH A 108 521 116 HOH HOH . F 4 HOH A 109 522 117 HOH HOH . F 4 HOH A 110 523 118 HOH HOH . F 4 HOH A 111 524 119 HOH HOH . F 4 HOH A 112 525 120 HOH HOH . F 4 HOH A 113 526 121 HOH HOH . F 4 HOH A 114 527 122 HOH HOH . F 4 HOH A 115 528 123 HOH HOH . F 4 HOH A 116 529 124 HOH HOH . F 4 HOH A 117 530 125 HOH HOH . F 4 HOH A 118 531 126 HOH HOH . F 4 HOH A 119 532 127 HOH HOH . F 4 HOH A 120 533 128 HOH HOH . F 4 HOH A 121 534 129 HOH HOH . F 4 HOH A 122 535 130 HOH HOH . F 4 HOH A 123 536 131 HOH HOH . F 4 HOH A 124 537 132 HOH HOH . F 4 HOH A 125 538 133 HOH HOH . F 4 HOH A 126 539 134 HOH HOH . F 4 HOH A 127 540 135 HOH HOH . F 4 HOH A 128 541 136 HOH HOH . F 4 HOH A 129 542 137 HOH HOH . F 4 HOH A 130 543 138 HOH HOH . F 4 HOH A 131 544 139 HOH HOH . F 4 HOH A 132 545 140 HOH HOH . F 4 HOH A 133 546 141 HOH HOH . F 4 HOH A 134 547 142 HOH HOH . F 4 HOH A 135 548 143 HOH HOH . F 4 HOH A 136 549 144 HOH HOH . F 4 HOH A 137 550 145 HOH HOH . F 4 HOH A 138 551 146 HOH HOH . F 4 HOH A 139 552 147 HOH HOH . F 4 HOH A 140 553 7 HOH HOH . F 4 HOH A 141 554 101 HOH HOH . G 4 HOH B 1 415 25 HOH HOH . G 4 HOH B 2 416 29 HOH HOH . G 4 HOH B 3 417 48 HOH HOH . G 4 HOH B 4 418 55 HOH HOH . G 4 HOH B 5 419 72 HOH HOH . G 4 HOH B 6 420 77 HOH HOH . G 4 HOH B 7 421 96 HOH HOH . G 4 HOH B 8 422 111 HOH HOH . G 4 HOH B 9 423 1 HOH HOH . G 4 HOH B 10 424 2 HOH HOH . G 4 HOH B 11 425 3 HOH HOH . G 4 HOH B 12 426 4 HOH HOH . G 4 HOH B 13 427 5 HOH HOH . G 4 HOH B 14 428 6 HOH HOH . G 4 HOH B 15 429 8 HOH HOH . G 4 HOH B 16 430 9 HOH HOH . G 4 HOH B 17 431 10 HOH HOH . G 4 HOH B 18 432 11 HOH HOH . G 4 HOH B 19 433 12 HOH HOH . G 4 HOH B 20 434 13 HOH HOH . G 4 HOH B 21 435 14 HOH HOH . G 4 HOH B 22 436 15 HOH HOH . G 4 HOH B 23 437 16 HOH HOH . G 4 HOH B 24 438 17 HOH HOH . G 4 HOH B 25 439 18 HOH HOH . G 4 HOH B 26 440 19 HOH HOH . G 4 HOH B 27 441 20 HOH HOH . G 4 HOH B 28 442 21 HOH HOH . G 4 HOH B 29 443 22 HOH HOH . G 4 HOH B 30 444 23 HOH HOH . G 4 HOH B 31 445 24 HOH HOH . G 4 HOH B 32 446 25 HOH HOH . G 4 HOH B 33 447 26 HOH HOH . G 4 HOH B 34 448 27 HOH HOH . G 4 HOH B 35 449 28 HOH HOH . G 4 HOH B 36 450 29 HOH HOH . G 4 HOH B 37 451 30 HOH HOH . G 4 HOH B 38 452 31 HOH HOH . G 4 HOH B 39 453 32 HOH HOH . G 4 HOH B 40 454 33 HOH HOH . G 4 HOH B 41 455 34 HOH HOH . G 4 HOH B 42 456 35 HOH HOH . G 4 HOH B 43 457 36 HOH HOH . G 4 HOH B 44 458 37 HOH HOH . G 4 HOH B 45 459 38 HOH HOH . G 4 HOH B 46 460 39 HOH HOH . G 4 HOH B 47 461 40 HOH HOH . G 4 HOH B 48 462 41 HOH HOH . G 4 HOH B 49 463 42 HOH HOH . G 4 HOH B 50 464 43 HOH HOH . G 4 HOH B 51 465 44 HOH HOH . G 4 HOH B 52 466 45 HOH HOH . G 4 HOH B 53 467 46 HOH HOH . G 4 HOH B 54 468 47 HOH HOH . G 4 HOH B 55 469 48 HOH HOH . G 4 HOH B 56 470 49 HOH HOH . G 4 HOH B 57 471 50 HOH HOH . G 4 HOH B 58 472 51 HOH HOH . G 4 HOH B 59 473 52 HOH HOH . G 4 HOH B 60 474 53 HOH HOH . G 4 HOH B 61 475 54 HOH HOH . G 4 HOH B 62 476 55 HOH HOH . G 4 HOH B 63 477 56 HOH HOH . G 4 HOH B 64 478 57 HOH HOH . G 4 HOH B 65 479 58 HOH HOH . G 4 HOH B 66 480 59 HOH HOH . G 4 HOH B 67 481 60 HOH HOH . G 4 HOH B 68 482 61 HOH HOH . G 4 HOH B 69 483 62 HOH HOH . G 4 HOH B 70 484 63 HOH HOH . G 4 HOH B 71 485 64 HOH HOH . G 4 HOH B 72 486 65 HOH HOH . G 4 HOH B 73 487 66 HOH HOH . G 4 HOH B 74 488 67 HOH HOH . G 4 HOH B 75 489 68 HOH HOH . G 4 HOH B 76 490 69 HOH HOH . G 4 HOH B 77 491 70 HOH HOH . G 4 HOH B 78 492 71 HOH HOH . G 4 HOH B 79 493 72 HOH HOH . G 4 HOH B 80 494 73 HOH HOH . G 4 HOH B 81 495 74 HOH HOH . G 4 HOH B 82 496 75 HOH HOH . G 4 HOH B 83 497 76 HOH HOH . G 4 HOH B 84 498 77 HOH HOH . G 4 HOH B 85 499 78 HOH HOH . G 4 HOH B 86 500 79 HOH HOH . G 4 HOH B 87 501 80 HOH HOH . G 4 HOH B 88 502 81 HOH HOH . G 4 HOH B 89 503 82 HOH HOH . G 4 HOH B 90 504 83 HOH HOH . G 4 HOH B 91 505 84 HOH HOH . G 4 HOH B 92 506 85 HOH HOH . G 4 HOH B 93 507 86 HOH HOH . G 4 HOH B 94 508 87 HOH HOH . G 4 HOH B 95 509 88 HOH HOH . G 4 HOH B 96 510 89 HOH HOH . G 4 HOH B 97 511 90 HOH HOH . G 4 HOH B 98 512 91 HOH HOH . G 4 HOH B 99 513 92 HOH HOH . G 4 HOH B 100 514 93 HOH HOH . G 4 HOH B 101 515 94 HOH HOH . G 4 HOH B 102 516 95 HOH HOH . G 4 HOH B 103 517 96 HOH HOH . G 4 HOH B 104 518 97 HOH HOH . G 4 HOH B 105 519 98 HOH HOH . G 4 HOH B 106 520 99 HOH HOH . G 4 HOH B 107 521 100 HOH HOH . G 4 HOH B 108 522 102 HOH HOH . G 4 HOH B 109 523 103 HOH HOH . G 4 HOH B 110 524 104 HOH HOH . G 4 HOH B 111 525 105 HOH HOH . G 4 HOH B 112 526 106 HOH HOH . G 4 HOH B 113 527 107 HOH HOH . G 4 HOH B 114 528 108 HOH HOH . G 4 HOH B 115 529 109 HOH HOH . G 4 HOH B 116 530 110 HOH HOH . G 4 HOH B 117 531 111 HOH HOH . G 4 HOH B 118 532 112 HOH HOH . G 4 HOH B 119 533 113 HOH HOH . G 4 HOH B 120 534 114 HOH HOH . G 4 HOH B 121 535 115 HOH HOH . G 4 HOH B 122 536 116 HOH HOH . G 4 HOH B 123 537 117 HOH HOH . G 4 HOH B 124 538 118 HOH HOH . G 4 HOH B 125 539 119 HOH HOH . G 4 HOH B 126 540 120 HOH HOH . G 4 HOH B 127 541 121 HOH HOH . G 4 HOH B 128 542 122 HOH HOH . G 4 HOH B 129 543 123 HOH HOH . G 4 HOH B 130 544 124 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1' IOP . . . E 3 102.75 47.2 13.014 1 25.2 ? C1' IOP 414 B 1 HETATM 2 O O1 IOP . . . E 3 103.119 46.694 14.09 1 25.27 ? O1 IOP 414 B 1 HETATM 3 O O2 IOP . . . E 3 102.164 48.301 12.954 1 25.85 ? O2 IOP 414 B 1 HETATM 4 C C2' IOP . . . E 3 102.958 46.434 11.73 1 25.06 ? C2' IOP 414 B 1 HETATM 5 C C3' IOP . . . E 3 101.663 46.253 10.959 1 24.9 ? C3' IOP 414 B 1 HETATM 6 N N1 IOP . . . E 3 99.048 44.985 13.231 1 25.21 ? N1 IOP 414 B 1 HETATM 7 C C2 IOP . . . E 3 99.803 45.997 12.688 1 24.85 ? C2 IOP 414 B 1 HETATM 8 C C3 IOP . . . E 3 100.635 45.503 11.727 1 24.73 ? C3 IOP 414 B 1 HETATM 9 C C3A IOP . . . E 3 100.375 44.095 11.652 1 24.87 ? C3A IOP 414 B 1 HETATM 10 C C4 IOP . . . E 3 100.888 43.056 10.875 1 24.78 ? C4 IOP 414 B 1 HETATM 11 C C5 IOP . . . E 3 100.403 41.771 11.075 1 24.49 ? C5 IOP 414 B 1 HETATM 12 C C6 IOP . . . E 3 99.416 41.511 12.037 1 24.92 ? C6 IOP 414 B 1 HETATM 13 C C7 IOP . . . E 3 98.892 42.513 12.814 1 25.33 ? C7 IOP 414 B 1 HETATM 14 C C7A IOP . . . E 3 99.381 43.808 12.611 1 25.15 ? C7A IOP 414 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #