data_2AYR # _model_server_result.job_id WVFcAm3Wf_HadZiI6SMJtw _model_server_result.datetime_utc '2024-11-22 19:51:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ayr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 2AYR # _exptl.entry_id 2AYR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 517.636 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-(4-METHYLSULFONYL-PHENYL)-5-[4-(2-PIPERIDIN-1-YLETHOXY)PHENOXY]NAPHTHALEN-2-OL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2AYR _cell.length_a 58.868 _cell.length_b 58.868 _cell.length_c 276.006 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2AYR _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 29.434 50.981183 46.001 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C30 H31 N O5 S' _chem_comp.formula_weight 517.636 _chem_comp.id L4G _chem_comp.mon_nstd_flag . _chem_comp.name 6-(4-METHYLSULFONYL-PHENYL)-5-[4-(2-PIPERIDIN-1-YLETHOXY)PHENOXY]NAPHTHALEN-2-OL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 C10 L4G sing 173 n y C5 C2 L4G sing 174 n y C5 C11 L4G doub 175 n y C6 C2 L4G sing 176 n y C6 C12 L4G doub 177 n y C6 H6 L4G sing 178 n n C7 C13 L4G doub 179 n y C7 C3 L4G sing 180 n y C7 C12 L4G sing 181 n y C8 C3 L4G doub 182 n y C8 C14 L4G sing 183 n y C8 H8 L4G sing 184 n n C10 C17 L4G doub 185 n y C10 H10 L4G sing 186 n n C13 C19 L4G sing 187 n y C13 H13 L4G sing 188 n n C15 C20 L4G doub 189 n y C15 C9 L4G sing 190 n y C15 H15 L4G sing 191 n n C17 C22 L4G sing 192 n y C17 H17 L4G sing 193 n n C20 C24 L4G sing 194 n y C20 H20 L4G sing 195 n n C21 C24 L4G doub 196 n y C21 C16 L4G sing 197 n y C21 H21 L4G sing 198 n n C22 C18 L4G doub 199 n y C22 S25 L4G sing 200 n n C24 O26 L4G sing 201 n n C1 C2 L4G doub 202 n y C1 C3 L4G sing 203 n y C1 O4 L4G sing 204 n n O4 C9 L4G sing 205 n n C9 C16 L4G doub 206 n y C11 C18 L4G sing 207 n y C11 H11 L4G sing 208 n n C12 H12 L4G sing 209 n n C14 C19 L4G doub 210 n y C14 H14 L4G sing 211 n n C16 H16 L4G sing 212 n n C18 H18 L4G sing 213 n n C19 O23 L4G sing 214 n n O23 H23 L4G sing 215 n n S25 C27 L4G sing 216 n n S25 O28 L4G doub 217 n n S25 O29 L4G doub 218 n n O26 C30 L4G sing 219 n n C27 H271 L4G sing 220 n n C27 H272 L4G sing 221 n n C27 H273 L4G sing 222 n n C30 C31 L4G sing 223 n n C30 H301 L4G sing 224 n n C30 H302 L4G sing 225 n n C31 N32 L4G sing 226 n n C31 H311 L4G sing 227 n n C31 H312 L4G sing 228 n n N32 C33 L4G sing 229 n n N32 C34 L4G sing 230 n n C33 C35 L4G sing 231 n n C33 H331 L4G sing 232 n n C33 H332 L4G sing 233 n n C34 C36 L4G sing 234 n n C34 H341 L4G sing 235 n n C34 H342 L4G sing 236 n n C35 C37 L4G sing 237 n n C35 H351 L4G sing 238 n n C35 H352 L4G sing 239 n n C36 C37 L4G sing 240 n n C36 H361 L4G sing 241 n n C36 H362 L4G sing 242 n n C37 H371 L4G sing 243 n n C37 H372 L4G sing 244 n n # _atom_sites.entry_id 2AYR _atom_sites.fract_transf_matrix[1][1] 0.016987 _atom_sites.fract_transf_matrix[1][2] 0.009808 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019615 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003623 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 L4G A 1 201 201 L4G L4G . C 3 HOH A 1 1 1 HOH HOH . C 3 HOH A 2 2 2 HOH HOH . C 3 HOH A 3 3 3 HOH HOH . C 3 HOH A 4 4 4 HOH HOH . C 3 HOH A 5 5 5 HOH HOH . C 3 HOH A 6 6 6 HOH HOH . C 3 HOH A 7 7 7 HOH HOH . C 3 HOH A 8 8 8 HOH HOH . C 3 HOH A 9 9 9 HOH HOH . C 3 HOH A 10 10 10 HOH HOH . C 3 HOH A 11 11 11 HOH HOH . C 3 HOH A 12 12 12 HOH HOH . C 3 HOH A 13 13 13 HOH HOH . C 3 HOH A 14 14 14 HOH HOH . C 3 HOH A 15 15 15 HOH HOH . C 3 HOH A 16 16 16 HOH HOH . C 3 HOH A 17 17 17 HOH HOH . C 3 HOH A 18 18 18 HOH HOH . C 3 HOH A 19 19 19 HOH HOH . C 3 HOH A 20 20 20 HOH HOH . C 3 HOH A 21 21 21 HOH HOH . C 3 HOH A 22 22 22 HOH HOH . C 3 HOH A 23 23 23 HOH HOH . C 3 HOH A 24 24 24 HOH HOH . C 3 HOH A 25 25 25 HOH HOH . C 3 HOH A 26 26 26 HOH HOH . C 3 HOH A 27 27 27 HOH HOH . C 3 HOH A 28 28 28 HOH HOH . C 3 HOH A 29 29 29 HOH HOH . C 3 HOH A 30 30 30 HOH HOH . C 3 HOH A 31 31 31 HOH HOH . C 3 HOH A 32 32 32 HOH HOH . C 3 HOH A 33 33 33 HOH HOH . C 3 HOH A 34 34 34 HOH HOH . C 3 HOH A 35 35 35 HOH HOH . C 3 HOH A 36 36 36 HOH HOH . C 3 HOH A 37 37 37 HOH HOH . C 3 HOH A 38 38 38 HOH HOH . C 3 HOH A 39 39 39 HOH HOH . C 3 HOH A 40 40 40 HOH HOH . C 3 HOH A 41 41 41 HOH HOH . C 3 HOH A 42 42 42 HOH HOH . C 3 HOH A 43 43 43 HOH HOH . C 3 HOH A 44 44 44 HOH HOH . C 3 HOH A 45 45 45 HOH HOH . C 3 HOH A 46 46 46 HOH HOH . C 3 HOH A 47 47 47 HOH HOH . C 3 HOH A 48 48 48 HOH HOH . C 3 HOH A 49 49 49 HOH HOH . C 3 HOH A 50 50 50 HOH HOH . C 3 HOH A 51 51 51 HOH HOH . C 3 HOH A 52 52 52 HOH HOH . C 3 HOH A 53 53 53 HOH HOH . C 3 HOH A 54 54 54 HOH HOH . C 3 HOH A 55 55 55 HOH HOH . C 3 HOH A 56 56 56 HOH HOH . C 3 HOH A 57 57 57 HOH HOH . C 3 HOH A 58 58 58 HOH HOH . C 3 HOH A 59 59 59 HOH HOH . C 3 HOH A 60 60 60 HOH HOH . C 3 HOH A 61 61 61 HOH HOH . C 3 HOH A 62 62 62 HOH HOH . C 3 HOH A 63 63 63 HOH HOH . C 3 HOH A 64 64 64 HOH HOH . C 3 HOH A 65 65 65 HOH HOH . C 3 HOH A 66 66 66 HOH HOH . C 3 HOH A 67 67 67 HOH HOH . C 3 HOH A 68 68 68 HOH HOH . C 3 HOH A 69 69 69 HOH HOH . C 3 HOH A 70 70 70 HOH HOH . C 3 HOH A 71 71 71 HOH HOH . C 3 HOH A 72 72 72 HOH HOH . C 3 HOH A 73 73 73 HOH HOH . C 3 HOH A 74 74 74 HOH HOH . C 3 HOH A 75 75 75 HOH HOH . C 3 HOH A 76 76 76 HOH HOH . C 3 HOH A 77 77 77 HOH HOH . C 3 HOH A 78 78 78 HOH HOH . C 3 HOH A 79 79 79 HOH HOH . C 3 HOH A 80 80 80 HOH HOH . C 3 HOH A 81 81 81 HOH HOH . C 3 HOH A 82 82 82 HOH HOH . C 3 HOH A 83 83 83 HOH HOH . C 3 HOH A 84 84 84 HOH HOH . C 3 HOH A 85 85 85 HOH HOH . C 3 HOH A 86 86 86 HOH HOH . C 3 HOH A 87 87 87 HOH HOH . C 3 HOH A 88 88 88 HOH HOH . C 3 HOH A 89 89 89 HOH HOH . C 3 HOH A 90 90 90 HOH HOH . C 3 HOH A 91 91 91 HOH HOH . C 3 HOH A 92 92 92 HOH HOH . C 3 HOH A 93 93 93 HOH HOH . C 3 HOH A 94 94 94 HOH HOH . C 3 HOH A 95 95 95 HOH HOH . C 3 HOH A 96 96 96 HOH HOH . C 3 HOH A 97 97 97 HOH HOH . C 3 HOH A 98 98 98 HOH HOH . C 3 HOH A 99 99 99 HOH HOH . C 3 HOH A 100 100 100 HOH HOH . C 3 HOH A 101 101 101 HOH HOH . C 3 HOH A 102 102 102 HOH HOH . C 3 HOH A 103 103 103 HOH HOH . C 3 HOH A 104 104 104 HOH HOH . C 3 HOH A 105 105 105 HOH HOH . C 3 HOH A 106 106 106 HOH HOH . C 3 HOH A 107 107 107 HOH HOH . C 3 HOH A 108 108 108 HOH HOH . C 3 HOH A 109 109 109 HOH HOH . C 3 HOH A 110 110 110 HOH HOH . C 3 HOH A 111 111 111 HOH HOH . C 3 HOH A 112 112 112 HOH HOH . C 3 HOH A 113 113 113 HOH HOH . C 3 HOH A 114 114 114 HOH HOH . C 3 HOH A 115 115 115 HOH HOH . C 3 HOH A 116 116 116 HOH HOH . C 3 HOH A 117 117 117 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 L4G . . . B 2 32.207 0.466 28.24 1 25.19 ? C5 L4G 201 A 1 HETATM 2 C C6 L4G . . . B 2 29.857 1.355 28.253 1 22.26 ? C6 L4G 201 A 1 HETATM 3 C C7 L4G . . . B 2 27.918 -0.029 27.656 1 21.12 ? C7 L4G 201 A 1 HETATM 4 C C8 L4G . . . B 2 28.218 -2.413 27.004 1 22.02 ? C8 L4G 201 A 1 HETATM 5 C C10 L4G . . . B 2 32.872 1.629 27.72 1 28.67 ? C10 L4G 201 A 1 HETATM 6 C C13 L4G . . . B 2 26.52 -0.161 27.472 1 22.05 ? C13 L4G 201 A 1 HETATM 7 C C15 L4G . . . B 2 32.648 -3.198 25.807 1 25.96 ? C15 L4G 201 A 1 HETATM 8 C C17 L4G . . . B 2 34.267 1.803 27.925 1 29.2 ? C17 L4G 201 A 1 HETATM 9 C C20 L4G . . . B 2 33.288 -3.29 24.55 1 26.7 ? C20 L4G 201 A 1 HETATM 10 C C21 L4G . . . B 2 31.956 -1.395 23.708 1 26.79 ? C21 L4G 201 A 1 HETATM 11 C C22 L4G . . . B 2 35.009 0.824 28.636 1 31.79 ? C22 L4G 201 A 1 HETATM 12 C C24 L4G . . . B 2 32.948 -2.384 23.478 1 26.76 ? C24 L4G 201 A 1 HETATM 13 C C1 L4G . . . B 2 30.202 -1.024 27.598 1 22.37 ? C1 L4G 201 A 1 HETATM 14 C C2 L4G . . . B 2 30.751 0.259 28.031 1 24.52 ? C2 L4G 201 A 1 HETATM 15 C C3 L4G . . . B 2 28.79 -1.162 27.418 1 22.16 ? C3 L4G 201 A 1 HETATM 16 O O4 L4G . . . B 2 31.032 -2.157 27.352 1 24.69 ? O4 L4G 201 A 1 HETATM 17 C C9 L4G . . . B 2 31.657 -2.214 26.046 1 24.86 ? C9 L4G 201 A 1 HETATM 18 C C11 L4G . . . B 2 32.98 -0.503 28.959 1 28.99 ? C11 L4G 201 A 1 HETATM 19 C C12 L4G . . . B 2 28.46 1.213 28.067 1 23.87 ? C12 L4G 201 A 1 HETATM 20 C C14 L4G . . . B 2 26.822 -2.529 26.826 1 22.35 ? C14 L4G 201 A 1 HETATM 21 C C16 L4G . . . B 2 31.318 -1.305 24.965 1 25.17 ? C16 L4G 201 A 1 HETATM 22 C C18 L4G . . . B 2 34.367 -0.324 29.154 1 30.71 ? C18 L4G 201 A 1 HETATM 23 C C19 L4G . . . B 2 25.973 -1.411 27.058 1 23.76 ? C19 L4G 201 A 1 HETATM 24 O O23 L4G . . . B 2 24.651 -1.533 26.879 1 24.57 ? O23 L4G 201 A 1 HETATM 25 S S25 L4G . . . B 2 36.758 1.03 28.908 1 34.6 ? S25 L4G 201 A 1 HETATM 26 O O26 L4G . . . B 2 33.537 -2.406 22.189 1 30.34 ? O26 L4G 201 A 1 HETATM 27 C C27 L4G . . . B 2 38.042 -0.218 28.504 1 35.64 ? C27 L4G 201 A 1 HETATM 28 O O28 L4G . . . B 2 36.932 1.385 30.388 1 35.18 ? O28 L4G 201 A 1 HETATM 29 O O29 L4G . . . B 2 37.18 2.384 28.306 1 36.23 ? O29 L4G 201 A 1 HETATM 30 C C30 L4G . . . B 2 34.263 -3.573 21.76 1 34.19 ? C30 L4G 201 A 1 HETATM 31 C C31 L4G . . . B 2 33.278 -4.552 21.086 1 34.06 ? C31 L4G 201 A 1 HETATM 32 N N32 L4G . . . B 2 32.52 -4.144 19.902 1 33.13 ? N32 L4G 201 A 1 HETATM 33 C C33 L4G . . . B 2 33.401 -3.475 18.919 1 35.2 ? C33 L4G 201 A 1 HETATM 34 C C34 L4G . . . B 2 31.363 -3.251 20.203 1 34.68 ? C34 L4G 201 A 1 HETATM 35 C C35 L4G . . . B 2 32.654 -3.324 17.579 1 36.01 ? C35 L4G 201 A 1 HETATM 36 C C36 L4G . . . B 2 30.499 -3.046 18.939 1 35.89 ? C36 L4G 201 A 1 HETATM 37 C C37 L4G . . . B 2 31.368 -2.493 17.789 1 35.14 ? C37 L4G 201 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 37 #