data_2AZZ # _model_server_result.job_id e6gw4oqeGUL31g96ZJREKA _model_server_result.datetime_utc '2024-10-13 06:22:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2azz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":125}' # _entry.id 2AZZ # _exptl.entry_id 2AZZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2AZZ _cell.length_a 68.65 _cell.length_b 68.65 _cell.length_c 65.586 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2AZZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS monomeric 1 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I 1 1 A,B,C,D,E,F,G,H,I 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 0 43.724 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 11 A CYS 11 1_555 A SG CYS 77 A CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 27 A CYS 27 1_555 A SG CYS 124 A CYS 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 A SG CYS 29 A CYS 29 1_555 A SG CYS 45 A CYS 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 A SG CYS 44 A CYS 44 1_555 A SG CYS 105 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf5 A SG CYS 51 A CYS 51 1_555 A SG CYS 98 A CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf6 A SG CYS 61 A CYS 61 1_555 A SG CYS 91 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf7 A SG CYS 84 A CYS 84 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc1 A O TYR 28 A TYR 28 1_555 B CA CA . A CA 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc2 A O GLY 30 A GLY 30 1_555 B CA CA . A CA 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc3 A O GLY 32 A GLY 32 1_555 B CA CA . A CA 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc4 A OD1 ASP 49 A ASP 49 1_555 B CA CA . A CA 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc5 A OD2 ASP 49 A ASP 49 1_555 B CA CA . A CA 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.643 ? metalc ? metalc6 A O LYS 62 A LYS 62 1_555 D CA CA . A CA 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc7 A O LYS 62 A LYS 62 5_555 D CA CA . A CA 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc8 A OE1 GLU 71 A GLU 71 1_555 C CA CA . A CA 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc9 A OE1 GLU 71 A GLU 71 5_555 C CA CA . A CA 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc10 A O SER 72 A SER 72 1_555 C CA CA . A CA 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc11 A O SER 72 A SER 72 5_555 C CA CA . A CA 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc12 A OE1 GLU 92 A GLU 92 1_555 C CA CA . A CA 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc13 A OE1 GLU 92 A GLU 92 5_555 C CA CA . A CA 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc14 B CA CA . A CA 125 1_555 I O HOH . A HOH 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc15 B CA CA . A CA 125 1_555 I O HOH . A HOH 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc16 D CA CA . A CA 127 1_555 F CL CL . A CL 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.007 ? metalc ? metalc17 D CA CA . A CA 127 1_555 F CL CL . A CL 129 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.007 ? metalc ? metalc18 D CA CA . A CA 127 1_555 G CL CL . A CL 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.858 ? metalc ? metalc19 D CA CA . A CA 127 1_555 G CL CL . A CL 130 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.858 ? metalc ? metalc20 D CA CA . A CA 127 1_555 I O HOH . A HOH 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.043 ? metalc ? metalc21 D CA CA . A CA 127 1_555 I O HOH . A HOH 172 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.043 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2AZZ _atom_sites.fract_transf_matrix[1][1] 0.014567 _atom_sites.fract_transf_matrix[1][2] 0.00841 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01682 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015247 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 125 104 CA CA . C 2 CA A 1 126 105 CA CA . D 2 CA A 1 127 106 CA CA . E 3 CL A 1 128 107 CL CL . F 3 CL A 1 129 108 CL CL . G 3 CL A 1 130 109 CL CL . H 4 TCH A 1 131 110 TCH TCH . I 5 HOH A 1 132 1 HOH HOH . I 5 HOH A 2 133 2 HOH HOH . I 5 HOH A 3 134 3 HOH HOH . I 5 HOH A 4 135 4 HOH HOH . I 5 HOH A 5 136 5 HOH HOH . I 5 HOH A 6 137 6 HOH HOH . I 5 HOH A 7 138 7 HOH HOH . I 5 HOH A 8 139 8 HOH HOH . I 5 HOH A 9 140 9 HOH HOH . I 5 HOH A 10 141 10 HOH HOH . I 5 HOH A 11 142 11 HOH HOH . I 5 HOH A 12 143 12 HOH HOH . I 5 HOH A 13 144 15 HOH HOH . I 5 HOH A 14 145 16 HOH HOH . I 5 HOH A 15 146 17 HOH HOH . I 5 HOH A 16 147 18 HOH HOH . I 5 HOH A 17 148 19 HOH HOH . I 5 HOH A 18 149 21 HOH HOH . I 5 HOH A 19 150 22 HOH HOH . I 5 HOH A 20 151 23 HOH HOH . I 5 HOH A 21 152 24 HOH HOH . I 5 HOH A 22 153 25 HOH HOH . I 5 HOH A 23 154 26 HOH HOH . I 5 HOH A 24 155 27 HOH HOH . I 5 HOH A 25 156 28 HOH HOH . I 5 HOH A 26 157 29 HOH HOH . I 5 HOH A 27 158 30 HOH HOH . I 5 HOH A 28 159 31 HOH HOH . I 5 HOH A 29 160 32 HOH HOH . I 5 HOH A 30 161 33 HOH HOH . I 5 HOH A 31 162 34 HOH HOH . I 5 HOH A 32 163 35 HOH HOH . I 5 HOH A 33 164 36 HOH HOH . I 5 HOH A 34 165 37 HOH HOH . I 5 HOH A 35 166 38 HOH HOH . I 5 HOH A 36 167 39 HOH HOH . I 5 HOH A 37 168 40 HOH HOH . I 5 HOH A 38 169 41 HOH HOH . I 5 HOH A 39 170 42 HOH HOH . I 5 HOH A 40 171 43 HOH HOH . I 5 HOH A 41 172 44 HOH HOH . I 5 HOH A 42 173 45 HOH HOH . I 5 HOH A 43 174 46 HOH HOH . I 5 HOH A 44 175 47 HOH HOH . I 5 HOH A 45 176 48 HOH HOH . I 5 HOH A 46 177 49 HOH HOH . I 5 HOH A 47 178 50 HOH HOH . I 5 HOH A 48 179 51 HOH HOH . I 5 HOH A 49 180 52 HOH HOH . I 5 HOH A 50 181 53 HOH HOH . I 5 HOH A 51 182 54 HOH HOH . I 5 HOH A 52 183 55 HOH HOH . I 5 HOH A 53 184 56 HOH HOH . I 5 HOH A 54 185 58 HOH HOH . I 5 HOH A 55 186 59 HOH HOH . I 5 HOH A 56 187 60 HOH HOH . I 5 HOH A 57 188 61 HOH HOH . I 5 HOH A 58 189 62 HOH HOH . I 5 HOH A 59 190 63 HOH HOH . I 5 HOH A 60 191 64 HOH HOH . I 5 HOH A 61 192 65 HOH HOH . I 5 HOH A 62 193 66 HOH HOH . I 5 HOH A 63 194 67 HOH HOH . I 5 HOH A 64 195 68 HOH HOH . I 5 HOH A 65 196 69 HOH HOH . I 5 HOH A 66 197 70 HOH HOH . I 5 HOH A 67 198 71 HOH HOH . I 5 HOH A 68 199 72 HOH HOH . I 5 HOH A 69 200 73 HOH HOH . I 5 HOH A 70 201 74 HOH HOH . I 5 HOH A 71 202 75 HOH HOH . I 5 HOH A 72 203 77 HOH HOH . I 5 HOH A 73 204 78 HOH HOH . I 5 HOH A 74 205 79 HOH HOH . I 5 HOH A 75 206 80 HOH HOH . I 5 HOH A 76 207 81 HOH HOH . I 5 HOH A 77 208 82 HOH HOH . I 5 HOH A 78 209 83 HOH HOH . I 5 HOH A 79 210 84 HOH HOH . I 5 HOH A 80 211 85 HOH HOH . I 5 HOH A 81 212 86 HOH HOH . I 5 HOH A 82 213 87 HOH HOH . I 5 HOH A 83 214 88 HOH HOH . I 5 HOH A 84 215 89 HOH HOH . I 5 HOH A 85 216 90 HOH HOH . I 5 HOH A 86 217 91 HOH HOH . I 5 HOH A 87 218 92 HOH HOH . I 5 HOH A 88 219 93 HOH HOH . I 5 HOH A 89 220 94 HOH HOH . I 5 HOH A 90 221 96 HOH HOH . I 5 HOH A 91 222 97 HOH HOH . I 5 HOH A 92 223 98 HOH HOH . I 5 HOH A 93 224 99 HOH HOH . I 5 HOH A 94 225 100 HOH HOH . I 5 HOH A 95 226 101 HOH HOH . I 5 HOH A 96 227 102 HOH HOH . I 5 HOH A 97 228 103 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 30.156 _atom_site.Cartn_y 19.482 _atom_site.Cartn_z 14.406 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 31.58 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 125 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #