data_2B03 # _model_server_result.job_id pYwGFB69rO-dOFdPVf5_JA _model_server_result.datetime_utc '2024-10-13 06:22:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2b03 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":125}' # _entry.id 2B03 # _exptl.entry_id 2B03 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2B03 _cell.length_a 69.154 _cell.length_b 69.154 _cell.length_c 64.407 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2B03 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS monomeric 1 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 1 A,B,C,D 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 -x,-x+y,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 21.469 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 11 A CYS 11 1_555 A SG CYS 77 A CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf2 A SG CYS 27 A CYS 27 1_555 A SG CYS 124 A CYS 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 A SG CYS 29 A CYS 29 1_555 A SG CYS 45 A CYS 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf4 A SG CYS 44 A CYS 44 1_555 A SG CYS 105 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 A SG CYS 51 A CYS 51 1_555 A SG CYS 98 A CYS 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf6 A SG CYS 61 A CYS 61 1_555 A SG CYS 91 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf7 A SG CYS 84 A CYS 84 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc1 A OE2 GLU 71 A GLU 71 1_555 B CA CA . A CA 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc2 A OE2 GLU 71 A GLU 71 6_555 B CA CA . A CA 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc3 A O SER 72 A SER 72 1_555 B CA CA . A CA 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc4 A O SER 72 A SER 72 6_555 B CA CA . A CA 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc5 A OE2 GLU 92 A GLU 92 1_555 B CA CA . A CA 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc6 A OE2 GLU 92 A GLU 92 6_555 B CA CA . A CA 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2B03 _atom_sites.fract_transf_matrix[1][1] 0.01446 _atom_sites.fract_transf_matrix[1][2] 0.008349 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016698 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015526 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 125 70 CA CA . C 3 TUD A 1 126 71 TUD TUD . D 4 HOH A 1 127 1 HOH HOH . D 4 HOH A 2 128 2 HOH HOH . D 4 HOH A 3 129 3 HOH HOH . D 4 HOH A 4 130 4 HOH HOH . D 4 HOH A 5 131 5 HOH HOH . D 4 HOH A 6 132 6 HOH HOH . D 4 HOH A 7 133 7 HOH HOH . D 4 HOH A 8 134 8 HOH HOH . D 4 HOH A 9 135 9 HOH HOH . D 4 HOH A 10 136 10 HOH HOH . D 4 HOH A 11 137 11 HOH HOH . D 4 HOH A 12 138 12 HOH HOH . D 4 HOH A 13 139 13 HOH HOH . D 4 HOH A 14 140 14 HOH HOH . D 4 HOH A 15 141 15 HOH HOH . D 4 HOH A 16 142 16 HOH HOH . D 4 HOH A 17 143 17 HOH HOH . D 4 HOH A 18 144 18 HOH HOH . D 4 HOH A 19 145 19 HOH HOH . D 4 HOH A 20 146 20 HOH HOH . D 4 HOH A 21 147 21 HOH HOH . D 4 HOH A 22 148 22 HOH HOH . D 4 HOH A 23 149 23 HOH HOH . D 4 HOH A 24 150 24 HOH HOH . D 4 HOH A 25 151 25 HOH HOH . D 4 HOH A 26 152 26 HOH HOH . D 4 HOH A 27 153 27 HOH HOH . D 4 HOH A 28 154 28 HOH HOH . D 4 HOH A 29 155 29 HOH HOH . D 4 HOH A 30 156 30 HOH HOH . D 4 HOH A 31 157 31 HOH HOH . D 4 HOH A 32 158 32 HOH HOH . D 4 HOH A 33 159 33 HOH HOH . D 4 HOH A 34 160 34 HOH HOH . D 4 HOH A 35 161 35 HOH HOH . D 4 HOH A 36 162 36 HOH HOH . D 4 HOH A 37 163 37 HOH HOH . D 4 HOH A 38 164 38 HOH HOH . D 4 HOH A 39 165 39 HOH HOH . D 4 HOH A 40 166 40 HOH HOH . D 4 HOH A 41 167 41 HOH HOH . D 4 HOH A 42 168 42 HOH HOH . D 4 HOH A 43 169 43 HOH HOH . D 4 HOH A 44 170 44 HOH HOH . D 4 HOH A 45 171 45 HOH HOH . D 4 HOH A 46 172 46 HOH HOH . D 4 HOH A 47 173 47 HOH HOH . D 4 HOH A 48 174 48 HOH HOH . D 4 HOH A 49 175 49 HOH HOH . D 4 HOH A 50 176 50 HOH HOH . D 4 HOH A 51 177 51 HOH HOH . D 4 HOH A 52 178 52 HOH HOH . D 4 HOH A 53 179 53 HOH HOH . D 4 HOH A 54 180 54 HOH HOH . D 4 HOH A 55 181 55 HOH HOH . D 4 HOH A 56 182 56 HOH HOH . D 4 HOH A 57 183 57 HOH HOH . D 4 HOH A 58 184 58 HOH HOH . D 4 HOH A 59 185 59 HOH HOH . D 4 HOH A 60 186 60 HOH HOH . D 4 HOH A 61 187 61 HOH HOH . D 4 HOH A 62 188 62 HOH HOH . D 4 HOH A 63 189 63 HOH HOH . D 4 HOH A 64 190 64 HOH HOH . D 4 HOH A 65 191 65 HOH HOH . D 4 HOH A 66 192 66 HOH HOH . D 4 HOH A 67 193 67 HOH HOH . D 4 HOH A 68 194 68 HOH HOH . D 4 HOH A 69 195 69 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -17.652 _atom_site.Cartn_y 30.566 _atom_site.Cartn_z 10.731 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 11.51 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 125 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 452 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 1 #