data_2B0M # _model_server_result.job_id 8nCHsekv2YrmW6WQHTPNxg _model_server_result.datetime_utc '2024-11-26 23:44:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2b0m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 2B0M # _exptl.entry_id 2B0M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 156.096 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OROTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2B0M _cell.length_a 90.398 _cell.length_b 90.398 _cell.length_c 123.332 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2B0M _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H4 N2 O4' _chem_comp.formula_weight 156.096 _chem_comp.id ORO _chem_comp.mon_nstd_flag . _chem_comp.name 'OROTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 ORO sing 319 n y N1 C6 ORO sing 320 n y N1 HN1 ORO sing 321 n n C2 O2 ORO doub 322 n n C2 N3 ORO sing 323 n y N3 C4 ORO sing 324 n y N3 HN3 ORO sing 325 n n C4 O4 ORO doub 326 n n C4 C5 ORO sing 327 n y C5 C6 ORO doub 328 n y C5 H5 ORO sing 329 n n C6 C7 ORO sing 330 n n C7 O71 ORO doub 331 n n C7 O72 ORO sing 332 n n O72 HO7 ORO sing 333 n n # _atom_sites.entry_id 2B0M _atom_sites.fract_transf_matrix[1][1] 0.011062 _atom_sites.fract_transf_matrix[1][2] 0.006387 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012774 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008108 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 201 A 1 401 401 201 201 . C 3 FMN A 1 402 402 FMN FMN . D 4 ORO A 1 403 403 ORO ORO . E 5 HOH A 1 404 1 HOH HOH . E 5 HOH A 2 405 3 HOH HOH . E 5 HOH A 3 406 4 HOH HOH . E 5 HOH A 4 407 6 HOH HOH . E 5 HOH A 5 408 8 HOH HOH . E 5 HOH A 6 409 9 HOH HOH . E 5 HOH A 7 410 11 HOH HOH . E 5 HOH A 8 411 12 HOH HOH . E 5 HOH A 9 412 13 HOH HOH . E 5 HOH A 10 413 15 HOH HOH . E 5 HOH A 11 414 16 HOH HOH . E 5 HOH A 12 415 17 HOH HOH . E 5 HOH A 13 416 18 HOH HOH . E 5 HOH A 14 417 19 HOH HOH . E 5 HOH A 15 418 21 HOH HOH . E 5 HOH A 16 419 22 HOH HOH . E 5 HOH A 17 420 23 HOH HOH . E 5 HOH A 18 421 24 HOH HOH . E 5 HOH A 19 422 25 HOH HOH . E 5 HOH A 20 423 26 HOH HOH . E 5 HOH A 21 424 27 HOH HOH . E 5 HOH A 22 425 28 HOH HOH . E 5 HOH A 23 426 29 HOH HOH . E 5 HOH A 24 427 30 HOH HOH . E 5 HOH A 25 428 31 HOH HOH . E 5 HOH A 26 429 32 HOH HOH . E 5 HOH A 27 430 33 HOH HOH . E 5 HOH A 28 431 34 HOH HOH . E 5 HOH A 29 432 35 HOH HOH . E 5 HOH A 30 433 36 HOH HOH . E 5 HOH A 31 434 37 HOH HOH . E 5 HOH A 32 435 38 HOH HOH . E 5 HOH A 33 436 39 HOH HOH . E 5 HOH A 34 437 40 HOH HOH . E 5 HOH A 35 438 41 HOH HOH . E 5 HOH A 36 439 42 HOH HOH . E 5 HOH A 37 440 43 HOH HOH . E 5 HOH A 38 441 44 HOH HOH . E 5 HOH A 39 442 45 HOH HOH . E 5 HOH A 40 443 46 HOH HOH . E 5 HOH A 41 444 47 HOH HOH . E 5 HOH A 42 445 48 HOH HOH . E 5 HOH A 43 446 49 HOH HOH . E 5 HOH A 44 447 50 HOH HOH . E 5 HOH A 45 448 51 HOH HOH . E 5 HOH A 46 449 52 HOH HOH . E 5 HOH A 47 450 53 HOH HOH . E 5 HOH A 48 451 54 HOH HOH . E 5 HOH A 49 452 55 HOH HOH . E 5 HOH A 50 453 56 HOH HOH . E 5 HOH A 51 454 57 HOH HOH . E 5 HOH A 52 455 58 HOH HOH . E 5 HOH A 53 456 59 HOH HOH . E 5 HOH A 54 457 60 HOH HOH . E 5 HOH A 55 458 61 HOH HOH . E 5 HOH A 56 459 62 HOH HOH . E 5 HOH A 57 460 63 HOH HOH . E 5 HOH A 58 461 64 HOH HOH . E 5 HOH A 59 462 65 HOH HOH . E 5 HOH A 60 463 66 HOH HOH . E 5 HOH A 61 464 68 HOH HOH . E 5 HOH A 62 465 69 HOH HOH . E 5 HOH A 63 466 70 HOH HOH . E 5 HOH A 64 467 71 HOH HOH . E 5 HOH A 65 468 72 HOH HOH . E 5 HOH A 66 469 73 HOH HOH . E 5 HOH A 67 470 74 HOH HOH . E 5 HOH A 68 471 75 HOH HOH . E 5 HOH A 69 472 76 HOH HOH . E 5 HOH A 70 473 77 HOH HOH . E 5 HOH A 71 474 78 HOH HOH . E 5 HOH A 72 475 79 HOH HOH . E 5 HOH A 73 476 80 HOH HOH . E 5 HOH A 74 477 81 HOH HOH . E 5 HOH A 75 478 82 HOH HOH . E 5 HOH A 76 479 83 HOH HOH . E 5 HOH A 77 480 84 HOH HOH . E 5 HOH A 78 481 85 HOH HOH . E 5 HOH A 79 482 86 HOH HOH . E 5 HOH A 80 483 87 HOH HOH . E 5 HOH A 81 484 88 HOH HOH . E 5 HOH A 82 485 89 HOH HOH . E 5 HOH A 83 486 90 HOH HOH . E 5 HOH A 84 487 91 HOH HOH . E 5 HOH A 85 488 92 HOH HOH . E 5 HOH A 86 489 93 HOH HOH . E 5 HOH A 87 490 94 HOH HOH . E 5 HOH A 88 491 95 HOH HOH . E 5 HOH A 89 492 96 HOH HOH . E 5 HOH A 90 493 97 HOH HOH . E 5 HOH A 91 494 98 HOH HOH . E 5 HOH A 92 495 99 HOH HOH . E 5 HOH A 93 496 100 HOH HOH . E 5 HOH A 94 497 101 HOH HOH . E 5 HOH A 95 498 102 HOH HOH . E 5 HOH A 96 499 103 HOH HOH . E 5 HOH A 97 500 104 HOH HOH . E 5 HOH A 98 501 105 HOH HOH . E 5 HOH A 99 502 106 HOH HOH . E 5 HOH A 100 503 107 HOH HOH . E 5 HOH A 101 504 108 HOH HOH . E 5 HOH A 102 505 109 HOH HOH . E 5 HOH A 103 506 110 HOH HOH . E 5 HOH A 104 507 111 HOH HOH . E 5 HOH A 105 508 112 HOH HOH . E 5 HOH A 106 509 113 HOH HOH . E 5 HOH A 107 510 114 HOH HOH . E 5 HOH A 108 511 115 HOH HOH . E 5 HOH A 109 512 116 HOH HOH . E 5 HOH A 110 513 117 HOH HOH . E 5 HOH A 111 514 118 HOH HOH . E 5 HOH A 112 515 119 HOH HOH . E 5 HOH A 113 516 120 HOH HOH . E 5 HOH A 114 517 121 HOH HOH . E 5 HOH A 115 518 122 HOH HOH . E 5 HOH A 116 519 123 HOH HOH . E 5 HOH A 117 520 124 HOH HOH . E 5 HOH A 118 521 125 HOH HOH . E 5 HOH A 119 522 126 HOH HOH . E 5 HOH A 120 523 127 HOH HOH . E 5 HOH A 121 524 128 HOH HOH . E 5 HOH A 122 525 129 HOH HOH . E 5 HOH A 123 526 130 HOH HOH . E 5 HOH A 124 527 131 HOH HOH . E 5 HOH A 125 528 132 HOH HOH . E 5 HOH A 126 529 133 HOH HOH . E 5 HOH A 127 530 134 HOH HOH . E 5 HOH A 128 531 135 HOH HOH . E 5 HOH A 129 532 136 HOH HOH . E 5 HOH A 130 533 137 HOH HOH . E 5 HOH A 131 534 138 HOH HOH . E 5 HOH A 132 535 139 HOH HOH . E 5 HOH A 133 536 140 HOH HOH . E 5 HOH A 134 537 141 HOH HOH . E 5 HOH A 135 538 142 HOH HOH . E 5 HOH A 136 539 143 HOH HOH . E 5 HOH A 137 540 144 HOH HOH . E 5 HOH A 138 541 145 HOH HOH . E 5 HOH A 139 542 146 HOH HOH . E 5 HOH A 140 543 147 HOH HOH . E 5 HOH A 141 544 148 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 ORO . . . D 4 -38.019 -26.073 -4.895 1 16.49 ? N1 ORO 403 A 1 HETATM 2 C C2 ORO . . . D 4 -36.718 -26.5 -5.193 1 17.74 ? C2 ORO 403 A 1 HETATM 3 O O2 ORO . . . D 4 -35.858 -26.69 -4.331 1 19.75 ? O2 ORO 403 A 1 HETATM 4 N N3 ORO . . . D 4 -36.419 -26.702 -6.545 1 14.39 ? N3 ORO 403 A 1 HETATM 5 C C4 ORO . . . D 4 -37.305 -26.525 -7.613 1 14.46 ? C4 ORO 403 A 1 HETATM 6 O O4 ORO . . . D 4 -36.965 -26.721 -8.764 1 14.18 ? O4 ORO 403 A 1 HETATM 7 C C5 ORO . . . D 4 -38.665 -26.075 -7.24 1 16.01 ? C5 ORO 403 A 1 HETATM 8 C C6 ORO . . . D 4 -38.949 -25.878 -5.933 1 17.63 ? C6 ORO 403 A 1 HETATM 9 C C7 ORO . . . D 4 -40.343 -25.41 -5.479 1 20.06 ? C7 ORO 403 A 1 HETATM 10 O O71 ORO . . . D 4 -40.963 -24.517 -6.04 1 21.74 ? O71 ORO 403 A 1 HETATM 11 O O72 ORO . . . D 4 -40.684 -26.103 -4.479 1 21.57 ? O72 ORO 403 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #