data_2B1V
#
_model_server_result.job_id            hNXVk4MnVPly4D4YtFGtZQ 
_model_server_result.datetime_utc      '2024-10-11 21:50:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2b1v 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":202}' 
#
_entry.id    2B1V 
#
_exptl.entry_id    2B1V 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              260.328 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-[(1S,2S,5S)-5-(HYDROXYMETHYL)-8-METHYL-3-OXABICYCLO[3.3.1]NON-7-EN-2-YL]PHENOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          108.81 
_cell.angle_gamma         90 
_cell.entry_id            2B1V 
_cell.length_a            55.959 
_cell.length_b            83.939 
_cell.length_c            58.24 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2B1V 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLU 83 A GLU 380 1_555 A N CME 84 A CME 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale2 A C CME 84 A CME 381 1_555 A N ALA 85 A ALA 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale3 A C LYS 119 A LYS 416 1_555 A N CME 120 A CME 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale4 A C CME 120 A CME 417 1_555 A N VAL 121 A VAL 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale5 A C LYS 232 A LYS 529 1_555 A N CME 233 A CME 530 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale6 A C CME 233 A CME 530 1_555 A N LYS 234 A LYS 531 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale7 B C GLU 83 B GLU 380 1_555 B N CME 84 B CME 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale8 B C CME 84 B CME 381 1_555 B N ALA 85 B ALA 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale9 B C LYS 119 B LYS 416 1_555 B N CME 120 B CME 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale10 B C CME 120 B CME 417 1_555 B N VAL 121 B VAL 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale11 B C LYS 232 B LYS 529 1_555 B N CME 233 B CME 530 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale12 B C CME 233 B CME 530 1_555 B N LYS 234 B LYS 531 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
#
_chem_comp.formula           'C16 H20 O3' 
_chem_comp.formula_weight    260.328 
_chem_comp.id                458 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-[(1S,2S,5S)-5-(HYDROXYMETHYL)-8-METHYL-3-OXABICYCLO[3.3.1]NON-7-EN-2-YL]PHENOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAK CAJ 458 sing 1 n n 
CAK CAL 458 sing 2 n n 
CAK HAK1 458 sing 3 n n 
CAK HAK2 458 sing 4 n n 
CAJ CAO 458 sing 5 n n 
CAJ CAI 458 sing 6 n n 
CAJ HAJ 458 sing 7 n n 
CAO CAR 458 sing 8 n n 
CAO CAQ 458 doub 9 n n 
CAR HAR1 458 sing 10 n n 
CAR HAR2 458 sing 11 n n 
CAR HAR3 458 sing 12 n n 
CAQ CAP 458 sing 13 n n 
CAQ HAQ 458 sing 14 n n 
CAP CAL 458 sing 15 n n 
CAP HAP1 458 sing 16 n n 
CAP HAP2 458 sing 17 n n 
CAL CAT 458 sing 18 n n 
CAL CAM 458 sing 19 n n 
CAT OAU 458 sing 20 n n 
CAT HAT1 458 sing 21 n n 
CAT HAT2 458 sing 22 n n 
OAU HAU 458 sing 23 n n 
CAM OAH 458 sing 24 n n 
CAM HAM1 458 sing 25 n n 
CAM HAM2 458 sing 26 n n 
OAH CAI 458 sing 27 n n 
CAI CAD 458 sing 28 n n 
CAI HAI 458 sing 29 n n 
CAD CAC 458 sing 30 n y 
CAD CAE 458 doub 31 n y 
CAC CAB 458 doub 32 n y 
CAC HAC 458 sing 33 n n 
CAB CAA 458 sing 34 n y 
CAB HAB 458 sing 35 n n 
CAA OAG 458 sing 36 n n 
CAA CAF 458 doub 37 n y 
OAG HAG 458 sing 38 n n 
CAF CAE 458 sing 39 n y 
CAF HAF 458 sing 40 n n 
CAE HAE 458 sing 41 n n 
#
_atom_sites.entry_id                     2B1V 
_atom_sites.fract_transf_matrix[1][1]    0.01787 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006087 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011913 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018139 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 458 A 1 201 1 458 DRG . 
F 3 458 B 1 202 1 458 DRG . 
G 4 HOH A 1 1 1 HOH HOH . 
G 4 HOH A 2 2 2 HOH HOH . 
G 4 HOH A 3 3 3 HOH HOH . 
G 4 HOH A 4 4 4 HOH HOH . 
G 4 HOH A 5 5 5 HOH HOH . 
G 4 HOH A 6 6 6 HOH HOH . 
G 4 HOH A 7 7 7 HOH HOH . 
G 4 HOH A 8 8 8 HOH HOH . 
G 4 HOH A 9 9 9 HOH HOH . 
G 4 HOH A 10 10 10 HOH HOH . 
G 4 HOH A 11 36 36 HOH HOH . 
G 4 HOH A 12 37 37 HOH HOH . 
G 4 HOH A 13 38 38 HOH HOH . 
G 4 HOH A 14 39 39 HOH HOH . 
G 4 HOH A 15 40 40 HOH HOH . 
G 4 HOH A 16 41 41 HOH HOH . 
G 4 HOH A 17 42 42 HOH HOH . 
G 4 HOH A 18 43 43 HOH HOH . 
G 4 HOH A 19 44 44 HOH HOH . 
G 4 HOH A 20 45 45 HOH HOH . 
G 4 HOH A 21 46 46 HOH HOH . 
G 4 HOH A 22 47 47 HOH HOH . 
G 4 HOH A 23 48 48 HOH HOH . 
G 4 HOH A 24 49 49 HOH HOH . 
G 4 HOH A 25 50 50 HOH HOH . 
G 4 HOH A 26 51 51 HOH HOH . 
G 4 HOH A 27 52 52 HOH HOH . 
G 4 HOH A 28 53 53 HOH HOH . 
G 4 HOH A 29 54 54 HOH HOH . 
G 4 HOH A 30 60 60 HOH HOH . 
G 4 HOH A 31 61 61 HOH HOH . 
G 4 HOH A 32 62 62 HOH HOH . 
G 4 HOH A 33 63 63 HOH HOH . 
G 4 HOH A 34 64 64 HOH HOH . 
G 4 HOH A 35 74 74 HOH HOH . 
G 4 HOH A 36 75 75 HOH HOH . 
G 4 HOH A 37 80 80 HOH HOH . 
G 4 HOH A 38 81 81 HOH HOH . 
G 4 HOH A 39 82 82 HOH HOH . 
G 4 HOH A 40 85 85 HOH HOH . 
G 4 HOH A 41 90 90 HOH HOH . 
H 4 HOH B 1 11 11 HOH HOH . 
H 4 HOH B 2 12 12 HOH HOH . 
H 4 HOH B 3 13 13 HOH HOH . 
H 4 HOH B 4 14 14 HOH HOH . 
H 4 HOH B 5 15 15 HOH HOH . 
H 4 HOH B 6 16 16 HOH HOH . 
H 4 HOH B 7 17 17 HOH HOH . 
H 4 HOH B 8 18 18 HOH HOH . 
H 4 HOH B 9 19 19 HOH HOH . 
H 4 HOH B 10 20 20 HOH HOH . 
H 4 HOH B 11 21 21 HOH HOH . 
H 4 HOH B 12 22 22 HOH HOH . 
H 4 HOH B 13 23 23 HOH HOH . 
H 4 HOH B 14 24 24 HOH HOH . 
H 4 HOH B 15 25 25 HOH HOH . 
H 4 HOH B 16 26 26 HOH HOH . 
H 4 HOH B 17 27 27 HOH HOH . 
H 4 HOH B 18 28 28 HOH HOH . 
H 4 HOH B 19 29 29 HOH HOH . 
H 4 HOH B 20 30 30 HOH HOH . 
H 4 HOH B 21 31 31 HOH HOH . 
H 4 HOH B 22 32 32 HOH HOH . 
H 4 HOH B 23 33 33 HOH HOH . 
H 4 HOH B 24 34 34 HOH HOH . 
H 4 HOH B 25 35 35 HOH HOH . 
H 4 HOH B 26 55 55 HOH HOH . 
H 4 HOH B 27 56 56 HOH HOH . 
H 4 HOH B 28 57 57 HOH HOH . 
H 4 HOH B 29 58 58 HOH HOH . 
H 4 HOH B 30 59 59 HOH HOH . 
H 4 HOH B 31 65 65 HOH HOH . 
H 4 HOH B 32 66 66 HOH HOH . 
H 4 HOH B 33 67 67 HOH HOH . 
H 4 HOH B 34 68 68 HOH HOH . 
H 4 HOH B 35 69 69 HOH HOH . 
H 4 HOH B 36 70 70 HOH HOH . 
H 4 HOH B 37 71 71 HOH HOH . 
H 4 HOH B 38 72 72 HOH HOH . 
H 4 HOH B 39 73 73 HOH HOH . 
H 4 HOH B 40 76 76 HOH HOH . 
H 4 HOH B 41 77 77 HOH HOH . 
H 4 HOH B 42 78 78 HOH HOH . 
H 4 HOH B 43 79 79 HOH HOH . 
H 4 HOH B 44 83 83 HOH HOH . 
H 4 HOH B 45 84 84 HOH HOH . 
H 4 HOH B 46 86 86 HOH HOH . 
H 4 HOH B 47 87 87 HOH HOH . 
H 4 HOH B 48 88 88 HOH HOH . 
H 4 HOH B 49 89 89 HOH HOH . 
H 4 HOH B 50 91 91 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAK 458 . . . F 3 -5.391 -4.961 18.311 1 32.2 ? CAK 458 202 B 1 
HETATM 2 C CAJ 458 . . . F 3 -4.626 -4.516 19.576 1 43.33 ? CAJ 458 202 B 1 
HETATM 3 C CAO 458 . . . F 3 -5.603 -3.664 20.322 1 31.68 ? CAO 458 202 B 1 
HETATM 4 C CAR 458 . . . F 3 -5.204 -2.314 20.92 1 19.21 ? CAR 458 202 B 1 
HETATM 5 C CAQ 458 . . . F 3 -6.887 -4.178 20.421 1 36.32 ? CAQ 458 202 B 1 
HETATM 6 C CAP 458 . . . F 3 -7.318 -5.396 19.893 1 22.7 ? CAP 458 202 B 1 
HETATM 7 C CAL 458 . . . F 3 -6.411 -5.996 18.788 1 27.77 ? CAL 458 202 B 1 
HETATM 8 C CAT 458 . . . F 3 -7.279 -6.541 17.634 1 25.76 ? CAT 458 202 B 1 
HETATM 9 O OAU 458 . . . F 3 -8.074 -5.485 17.044 1 25.2 ? OAU 458 202 B 1 
HETATM 10 C CAM 458 . . . F 3 -5.61 -7.125 19.393 1 32.68 ? CAM 458 202 B 1 
HETATM 11 O OAH 458 . . . F 3 -5.274 -6.644 20.712 1 48.71 ? OAH 458 202 B 1 
HETATM 12 C CAI 458 . . . F 3 -4.234 -5.704 20.516 1 26.45 ? CAI 458 202 B 1 
HETATM 13 C CAD 458 . . . F 3 -3.623 -5.215 21.848 1 20.56 ? CAD 458 202 B 1 
HETATM 14 C CAC 458 . . . F 3 -4.439 -4.912 22.961 1 16.19 ? CAC 458 202 B 1 
HETATM 15 C CAB 458 . . . F 3 -3.841 -4.469 24.155 1 23.04 ? CAB 458 202 B 1 
HETATM 16 C CAA 458 . . . F 3 -2.433 -4.355 24.213 1 22.44 ? CAA 458 202 B 1 
HETATM 17 O OAG 458 . . . F 3 -1.859 -3.925 25.367 1 18.91 ? OAG 458 202 B 1 
HETATM 18 C CAF 458 . . . F 3 -1.612 -4.653 23.105 1 16.22 ? CAF 458 202 B 1 
HETATM 19 C CAE 458 . . . F 3 -2.225 -5.086 21.902 1 20.74 ? CAE 458 202 B 1 
#
_model_server_stats.io_time_ms              62 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           19 
#