data_2B4M # _model_server_result.job_id LYzApj3cMyXSTUpt0940ug _model_server_result.datetime_utc '2025-01-11 00:44:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2b4m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":310}' # _entry.id 2B4M # _exptl.entry_id 2B4M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 144.192 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,1-DIMETHYL-PROLINIUM _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.87 _cell.angle_gamma 90 _cell.entry_id 2B4M _cell.length_a 88.562 _cell.length_b 28.318 _cell.length_c 102.826 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2B4M _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C 1 1 B,D 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C7 H14 N O2 1' _chem_comp.formula_weight 144.192 _chem_comp.id PBE _chem_comp.mon_nstd_flag . _chem_comp.name 1,1-DIMETHYL-PROLINIUM _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'PROLINE BETAINE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CD PBE sing 222 n n N CA PBE sing 223 n n N CE PBE sing 224 n n N CF PBE sing 225 n n CD CG PBE sing 226 n n CD HD1 PBE sing 227 n n CD HD2 PBE sing 228 n n CA CB PBE sing 229 n n CA C PBE sing 230 n n CA HA PBE sing 231 n n CB CG PBE sing 232 n n CB HB1 PBE sing 233 n n CB HB2 PBE sing 234 n n CG HG1 PBE sing 235 n n CG HG2 PBE sing 236 n n CE HE1 PBE sing 237 n n CE HE2 PBE sing 238 n n CE HE3 PBE sing 239 n n CF HF1 PBE sing 240 n n CF HF2 PBE sing 241 n n CF HF3 PBE sing 242 n n C O PBE doub 243 n n C OXT PBE sing 244 n n OXT HXT PBE sing 245 n n # _atom_sites.entry_id 2B4M _atom_sites.fract_transf_matrix[1][1] 0.011292 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000764 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.035313 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009747 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PBE A 1 311 311 PBE PBE . D 2 PBE B 1 310 310 PBE PBE . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N PBE . . . D 2 14.562 10.009 42.833 1 52.12 ? N PBE 310 B 1 HETATM 2 C CD PBE . . . D 2 14.585 9.482 44.216 1 52.19 ? CD PBE 310 B 1 HETATM 3 C CA PBE . . . D 2 15.982 10.295 42.485 1 52.11 ? CA PBE 310 B 1 HETATM 4 C CB PBE . . . D 2 16.778 9.227 43.24 1 52.05 ? CB PBE 310 B 1 HETATM 5 C CG PBE . . . D 2 16.053 9.2 44.58 1 52.12 ? CG PBE 310 B 1 HETATM 6 C CE PBE . . . D 2 13.833 9.062 41.976 1 52.07 ? CE PBE 310 B 1 HETATM 7 C CF PBE . . . D 2 13.839 11.28 42.809 1 52.24 ? CF PBE 310 B 1 HETATM 8 C C PBE . . . D 2 16.306 10.278 40.968 1 52.13 ? C PBE 310 B 1 HETATM 9 O O PBE . . . D 2 15.933 9.365 40.24 1 52.46 ? O PBE 310 B 1 HETATM 10 O OXT PBE . . . D 2 16.958 11.181 40.448 1 51.86 ? OXT PBE 310 B 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 241 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #