data_2B60
#
_model_server_result.job_id            tmeLd0fdlUhM8ARjS0VeUw 
_model_server_result.datetime_utc      '2024-11-18 04:22:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2b60 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":200}' 
#
_entry.id    2B60 
#
_exptl.entry_id    2B60 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2B60 
_cell.length_a            61.979 
_cell.length_b            61.979 
_cell.length_c            84.247 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2B60 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     2B60 
_atom_sites.fract_transf_matrix[1][1]    0.016134 
_atom_sites.fract_transf_matrix[1][2]    0.009315 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018631 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01187 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GOL A 1 200 200 GOL GOL . 
D 3 RIT B 1 100 100 RIT RIT . 
E 4 HOH A 1 201 1 HOH H2O . 
E 4 HOH A 2 202 2 HOH H2O . 
E 4 HOH A 3 203 3 HOH H2O . 
E 4 HOH A 4 204 9 HOH H2O . 
E 4 HOH A 5 205 11 HOH H2O . 
E 4 HOH A 6 206 14 HOH H2O . 
E 4 HOH A 7 207 15 HOH H2O . 
E 4 HOH A 8 208 16 HOH H2O . 
E 4 HOH A 9 209 20 HOH H2O . 
E 4 HOH A 10 210 24 HOH H2O . 
E 4 HOH A 11 211 25 HOH H2O . 
E 4 HOH A 12 212 26 HOH H2O . 
E 4 HOH A 13 213 28 HOH H2O . 
E 4 HOH A 14 214 33 HOH H2O . 
E 4 HOH A 15 215 34 HOH H2O . 
E 4 HOH A 16 216 35 HOH H2O . 
E 4 HOH A 17 217 36 HOH H2O . 
E 4 HOH A 18 218 39 HOH H2O . 
E 4 HOH A 19 219 40 HOH H2O . 
E 4 HOH A 20 220 41 HOH H2O . 
E 4 HOH A 21 221 42 HOH H2O . 
E 4 HOH A 22 222 43 HOH H2O . 
E 4 HOH A 23 223 46 HOH H2O . 
E 4 HOH A 24 224 49 HOH H2O . 
E 4 HOH A 25 225 50 HOH H2O . 
E 4 HOH A 26 226 51 HOH H2O . 
E 4 HOH A 27 227 54 HOH H2O . 
E 4 HOH A 28 228 61 HOH H2O . 
E 4 HOH A 29 229 63 HOH H2O . 
E 4 HOH A 30 230 69 HOH H2O . 
E 4 HOH A 31 231 72 HOH H2O . 
E 4 HOH A 32 232 76 HOH H2O . 
E 4 HOH A 33 233 77 HOH H2O . 
E 4 HOH A 34 234 82 HOH H2O . 
F 4 HOH B 1 101 4 HOH H2O . 
F 4 HOH B 2 102 5 HOH H2O . 
F 4 HOH B 3 103 6 HOH H2O . 
F 4 HOH B 4 104 7 HOH H2O . 
F 4 HOH B 5 105 10 HOH H2O . 
F 4 HOH B 6 106 12 HOH H2O . 
F 4 HOH B 7 107 13 HOH H2O . 
F 4 HOH B 8 108 17 HOH H2O . 
F 4 HOH B 9 109 18 HOH H2O . 
F 4 HOH B 10 110 19 HOH H2O . 
F 4 HOH B 11 111 21 HOH H2O . 
F 4 HOH B 12 112 22 HOH H2O . 
F 4 HOH B 13 113 23 HOH H2O . 
F 4 HOH B 14 114 27 HOH H2O . 
F 4 HOH B 15 115 29 HOH H2O . 
F 4 HOH B 16 116 30 HOH H2O . 
F 4 HOH B 17 117 31 HOH H2O . 
F 4 HOH B 18 118 32 HOH H2O . 
F 4 HOH B 19 119 37 HOH H2O . 
F 4 HOH B 20 120 38 HOH H2O . 
F 4 HOH B 21 121 44 HOH H2O . 
F 4 HOH B 22 122 45 HOH H2O . 
F 4 HOH B 23 123 47 HOH H2O . 
F 4 HOH B 24 124 48 HOH H2O . 
F 4 HOH B 25 125 52 HOH H2O . 
F 4 HOH B 26 126 53 HOH H2O . 
F 4 HOH B 27 127 55 HOH H2O . 
F 4 HOH B 28 128 56 HOH H2O . 
F 4 HOH B 29 129 57 HOH H2O . 
F 4 HOH B 30 130 58 HOH H2O . 
F 4 HOH B 31 131 59 HOH H2O . 
F 4 HOH B 32 132 60 HOH H2O . 
F 4 HOH B 33 133 62 HOH H2O . 
F 4 HOH B 34 134 64 HOH H2O . 
F 4 HOH B 35 135 65 HOH H2O . 
F 4 HOH B 36 136 66 HOH H2O . 
F 4 HOH B 37 137 67 HOH H2O . 
F 4 HOH B 38 138 68 HOH H2O . 
F 4 HOH B 39 139 70 HOH H2O . 
F 4 HOH B 40 140 83 HOH H2O . 
F 4 HOH B 41 141 84 HOH H2O . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 2 -0.585 31.625 -7.001 1 27.41 ? C1 GOL 200 A 1 
HETATM 2 O O1 GOL . . . C 2 -1.761 31.894 -7.714 1 23.99 ? O1 GOL 200 A 1 
HETATM 3 C C2 GOL . . . C 2 0.548 32.206 -7.79 1 30.97 ? C2 GOL 200 A 1 
HETATM 4 O O2 GOL . . . C 2 0.314 33.564 -8.043 1 33.23 ? O2 GOL 200 A 1 
HETATM 5 C C3 GOL . . . C 2 1.829 32.01 -7.022 1 32.73 ? C3 GOL 200 A 1 
HETATM 6 O O3 GOL . . . C 2 2.909 32.623 -7.743 1 32.51 ? O3 GOL 200 A 1 
#
_model_server_stats.io_time_ms              53 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           324 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#