data_2B6A # _model_server_result.job_id ES8uqQ0mnBnvm5M4QAsBAg _model_server_result.datetime_utc '2025-03-04 16:04:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2b6a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":561}' # _entry.id 2B6A # _exptl.entry_id 2B6A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 370.343 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(2,6-DIFLUOROBENZYL)-2-(2,6-DIFLUOROPHENYL)-4-METHYL-1H-BENZIMIDAZOLE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.82 _cell.angle_gamma 90 _cell.entry_id 2B6A _cell.length_a 227.706 _cell.length_b 70.168 _cell.length_c 106.63 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2B6A _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H14 F4 N2' _chem_comp.formula_weight 370.343 _chem_comp.id T50 _chem_comp.mon_nstd_flag . _chem_comp.name 1-(2,6-DIFLUOROBENZYL)-2-(2,6-DIFLUOROPHENYL)-4-METHYL-1H-BENZIMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 T50 sing 288 n y N1 C8 T50 sing 289 n y N1 C10 T50 sing 290 n n C2 N3 T50 doub 291 n y C2 C17 T50 sing 292 n y N3 C9 T50 sing 293 n y C4 C5 T50 doub 294 n y C4 C9 T50 sing 295 n y C4 C4A T50 sing 296 n n C5 C6 T50 sing 297 n y C5 H5 T50 sing 298 n n C6 C7 T50 doub 299 n y C6 H6 T50 sing 300 n n C7 C8 T50 sing 301 n y C7 H7 T50 sing 302 n n C8 C9 T50 doub 303 n y C17 C18 T50 sing 304 n y C17 C22 T50 doub 305 n y C18 C19 T50 doub 306 n y C18 F1 T50 sing 307 n n C4A H4A1 T50 sing 308 n n C4A H4A2 T50 sing 309 n n C4A H4A3 T50 sing 310 n n C19 C20 T50 sing 311 n y C19 H19 T50 sing 312 n n C20 C21 T50 doub 313 n y C20 H20 T50 sing 314 n n C21 C22 T50 sing 315 n y C21 H21 T50 sing 316 n n C22 F2 T50 sing 317 n n C10 C11 T50 sing 318 n n C10 H101 T50 sing 319 n n C10 H102 T50 sing 320 n n C11 C12 T50 sing 321 n y C11 C16 T50 doub 322 n y C12 C13 T50 doub 323 n y C12 F3 T50 sing 324 n n C13 C14 T50 sing 325 n y C13 H13 T50 sing 326 n n C14 C15 T50 doub 327 n y C14 H14 T50 sing 328 n n C15 C16 T50 sing 329 n y C15 H15 T50 sing 330 n n C16 F4 T50 sing 331 n n # _atom_sites.entry_id 2B6A _atom_sites.fract_transf_matrix[1][1] 0.00439 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00124 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01425 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00975 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id T50 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 561 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id T50 _pdbx_nonpoly_scheme.auth_mon_id T50 _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 T50 . . . C 3 146.235 -25.585 75.002 1 48.91 ? N1 T50 561 A 1 HETATM 2 C C2 T50 . . . C 3 145.985 -25.428 73.703 1 50.08 ? C2 T50 561 A 1 HETATM 3 N N3 T50 . . . C 3 145.1 -26.278 73.302 1 52.53 ? N3 T50 561 A 1 HETATM 4 C C4 T50 . . . C 3 143.758 -28.153 74.464 1 49.68 ? C4 T50 561 A 1 HETATM 5 C C5 T50 . . . C 3 143.608 -28.779 75.765 1 54.99 ? C5 T50 561 A 1 HETATM 6 C C6 T50 . . . C 3 144.399 -28.331 76.918 1 54.02 ? C6 T50 561 A 1 HETATM 7 C C7 T50 . . . C 3 145.338 -27.242 76.775 1 54.15 ? C7 T50 561 A 1 HETATM 8 C C8 T50 . . . C 3 145.464 -26.624 75.468 1 53.78 ? C8 T50 561 A 1 HETATM 9 C C9 T50 . . . C 3 144.703 -27.078 74.355 1 49.33 ? C9 T50 561 A 1 HETATM 10 C C17 T50 . . . C 3 146.599 -24.421 72.722 1 53.65 ? C17 T50 561 A 1 HETATM 11 C C18 T50 . . . C 3 145.797 -23.467 72.015 1 53.23 ? C18 T50 561 A 1 HETATM 12 C C4A T50 . . . C 3 142.926 -28.633 73.245 1 51.52 ? C4A T50 561 A 1 HETATM 13 C C19 T50 . . . C 3 146.367 -22.559 71.093 1 47.12 ? C19 T50 561 A 1 HETATM 14 C C20 T50 . . . C 3 147.792 -22.588 70.851 1 50.25 ? C20 T50 561 A 1 HETATM 15 C C21 T50 . . . C 3 148.614 -23.537 71.563 1 52.32 ? C21 T50 561 A 1 HETATM 16 C C22 T50 . . . C 3 147.991 -24.438 72.493 1 52.25 ? C22 T50 561 A 1 HETATM 17 F F1 T50 . . . C 3 144.506 -23.434 72.231 1 60.74 ? F1 T50 561 A 1 HETATM 18 F F2 T50 . . . C 3 148.716 -25.301 73.161 1 63.07 ? F2 T50 561 A 1 HETATM 19 C C10 T50 . . . C 3 147.152 -24.805 75.805 1 56.14 ? C10 T50 561 A 1 HETATM 20 C C11 T50 . . . C 3 146.434 -23.755 76.672 1 62.62 ? C11 T50 561 A 1 HETATM 21 C C12 T50 . . . C 3 145.841 -22.582 76.136 1 64.97 ? C12 T50 561 A 1 HETATM 22 C C13 T50 . . . C 3 145.206 -21.637 76.996 1 68.46 ? C13 T50 561 A 1 HETATM 23 C C14 T50 . . . C 3 145.17 -21.863 78.405 1 66.12 ? C14 T50 561 A 1 HETATM 24 C C15 T50 . . . C 3 145.763 -23.044 78.932 1 66.29 ? C15 T50 561 A 1 HETATM 25 C C16 T50 . . . C 3 146.388 -23.976 78.057 1 65.85 ? C16 T50 561 A 1 HETATM 26 F F3 T50 . . . C 3 145.873 -22.352 74.813 1 63.65 ? F3 T50 561 A 1 HETATM 27 F F4 T50 . . . C 3 146.937 -25.074 78.538 1 72.2 ? F4 T50 561 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 27 #