data_2B7J # _model_server_result.job_id EEPmWhf73EuLecQED74hNg _model_server_result.datetime_utc '2024-11-25 16:59:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2b7j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":298}' # _entry.id 2B7J # _exptl.entry_id 2B7J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2B7J _cell.length_a 55.6 _cell.length_b 81.9 _cell.length_c 79.3 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2B7J _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,K 1 1 B,L 2 1 C,H,I,J,M 3 1 D,N 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 53 A CYS 148 1_555 A SG CYS 57 A CYS 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf2 B SG CYS 53 B CYS 148 1_555 B SG CYS 57 B CYS 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf3 C SG CYS 53 C CYS 148 1_555 C SG CYS 57 C CYS 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf4 D SG CYS 53 D CYS 148 1_555 D SG CYS 57 D CYS 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc1 A SG CYS 86 A CYS 181 1_555 E CU CU . A CU 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc2 A SG CYS 86 A CYS 181 1_555 F CU CU . A CU 297 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc3 A SG CYS 121 A CYS 216 1_555 E CU CU . A CU 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc4 A NE2 HIS 144 A HIS 239 1_555 F CU CU . A CU 297 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc5 E CU CU . A CU 296 1_555 F CU CU . A CU 297 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? metalc ? metalc6 C SG CYS 86 C CYS 181 1_555 H CU CU . C CU 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc7 C SG CYS 86 C CYS 181 1_555 I CU CU . C CU 297 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc8 C SG CYS 121 C CYS 216 1_555 I CU CU . C CU 297 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc9 C NE2 HIS 144 C HIS 239 1_555 H CU CU . C CU 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc10 H CU CU . C CU 296 1_555 I CU CU . C CU 297 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.648 ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2B7J _atom_sites.fract_transf_matrix[1][1] 0.017986 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01221 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01261 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CU A 1 296 201 CU CU . F 2 CU A 1 297 204 CU CU . G 2 CU A 1 298 206 CU CU . H 2 CU C 1 296 202 CU CU . I 2 CU C 1 297 203 CU CU . J 2 CU C 1 298 205 CU CU . K 3 HOH A 1 299 1 HOH HOH . K 3 HOH A 2 300 3 HOH HOH . K 3 HOH A 3 301 11 HOH HOH . K 3 HOH A 4 302 12 HOH HOH . K 3 HOH A 5 303 19 HOH HOH . K 3 HOH A 6 304 30 HOH HOH . K 3 HOH A 7 305 31 HOH HOH . K 3 HOH A 8 306 36 HOH HOH . K 3 HOH A 9 307 39 HOH HOH . K 3 HOH A 10 308 43 HOH HOH . K 3 HOH A 11 309 44 HOH HOH . K 3 HOH A 12 310 49 HOH HOH . K 3 HOH A 13 311 52 HOH HOH . K 3 HOH A 14 312 53 HOH HOH . K 3 HOH A 15 313 59 HOH HOH . K 3 HOH A 16 314 60 HOH HOH . K 3 HOH A 17 315 65 HOH HOH . K 3 HOH A 18 316 66 HOH HOH . K 3 HOH A 19 317 67 HOH HOH . K 3 HOH A 20 318 75 HOH HOH . K 3 HOH A 21 319 82 HOH HOH . K 3 HOH A 22 320 86 HOH HOH . K 3 HOH A 23 321 89 HOH HOH . K 3 HOH A 24 322 91 HOH HOH . K 3 HOH A 25 323 94 HOH HOH . K 3 HOH A 26 324 97 HOH HOH . K 3 HOH A 27 325 100 HOH HOH . K 3 HOH A 28 326 108 HOH HOH . K 3 HOH A 29 327 119 HOH HOH . K 3 HOH A 30 328 124 HOH HOH . K 3 HOH A 31 329 125 HOH HOH . K 3 HOH A 32 330 127 HOH HOH . L 3 HOH B 1 296 8 HOH HOH . L 3 HOH B 2 297 9 HOH HOH . L 3 HOH B 3 298 15 HOH HOH . L 3 HOH B 4 299 22 HOH HOH . L 3 HOH B 5 300 23 HOH HOH . L 3 HOH B 6 301 24 HOH HOH . L 3 HOH B 7 302 25 HOH HOH . L 3 HOH B 8 303 28 HOH HOH . L 3 HOH B 9 304 32 HOH HOH . L 3 HOH B 10 305 34 HOH HOH . L 3 HOH B 11 306 42 HOH HOH . L 3 HOH B 12 307 45 HOH HOH . L 3 HOH B 13 308 62 HOH HOH . L 3 HOH B 14 309 64 HOH HOH . L 3 HOH B 15 310 71 HOH HOH . L 3 HOH B 16 311 72 HOH HOH . L 3 HOH B 17 312 73 HOH HOH . L 3 HOH B 18 313 76 HOH HOH . L 3 HOH B 19 314 78 HOH HOH . L 3 HOH B 20 315 80 HOH HOH . L 3 HOH B 21 316 81 HOH HOH . L 3 HOH B 22 317 84 HOH HOH . L 3 HOH B 23 318 93 HOH HOH . L 3 HOH B 24 319 98 HOH HOH . L 3 HOH B 25 320 99 HOH HOH . L 3 HOH B 26 321 101 HOH HOH . L 3 HOH B 27 322 103 HOH HOH . L 3 HOH B 28 323 110 HOH HOH . L 3 HOH B 29 324 113 HOH HOH . L 3 HOH B 30 325 115 HOH HOH . L 3 HOH B 31 326 121 HOH HOH . L 3 HOH B 32 327 130 HOH HOH . L 3 HOH B 33 328 132 HOH HOH . M 3 HOH C 1 299 2 HOH HOH . M 3 HOH C 2 300 10 HOH HOH . M 3 HOH C 3 301 13 HOH HOH . M 3 HOH C 4 302 16 HOH HOH . M 3 HOH C 5 303 17 HOH HOH . M 3 HOH C 6 304 18 HOH HOH . M 3 HOH C 7 305 20 HOH HOH . M 3 HOH C 8 306 37 HOH HOH . M 3 HOH C 9 307 38 HOH HOH . M 3 HOH C 10 308 41 HOH HOH . M 3 HOH C 11 309 47 HOH HOH . M 3 HOH C 12 310 51 HOH HOH . M 3 HOH C 13 311 54 HOH HOH . M 3 HOH C 14 312 56 HOH HOH . M 3 HOH C 15 313 57 HOH HOH . M 3 HOH C 16 314 58 HOH HOH . M 3 HOH C 17 315 61 HOH HOH . M 3 HOH C 18 316 70 HOH HOH . M 3 HOH C 19 317 74 HOH HOH . M 3 HOH C 20 318 77 HOH HOH . M 3 HOH C 21 319 79 HOH HOH . M 3 HOH C 22 320 87 HOH HOH . M 3 HOH C 23 321 88 HOH HOH . M 3 HOH C 24 322 95 HOH HOH . M 3 HOH C 25 323 96 HOH HOH . M 3 HOH C 26 324 102 HOH HOH . M 3 HOH C 27 325 109 HOH HOH . M 3 HOH C 28 326 112 HOH HOH . M 3 HOH C 29 327 114 HOH HOH . M 3 HOH C 30 328 116 HOH HOH . M 3 HOH C 31 329 118 HOH HOH . M 3 HOH C 32 330 123 HOH HOH . M 3 HOH C 33 331 134 HOH HOH . N 3 HOH D 1 296 4 HOH HOH . N 3 HOH D 2 297 5 HOH HOH . N 3 HOH D 3 298 6 HOH HOH . N 3 HOH D 4 299 7 HOH HOH . N 3 HOH D 5 300 14 HOH HOH . N 3 HOH D 6 301 21 HOH HOH . N 3 HOH D 7 302 26 HOH HOH . N 3 HOH D 8 303 27 HOH HOH . N 3 HOH D 9 304 29 HOH HOH . N 3 HOH D 10 305 33 HOH HOH . N 3 HOH D 11 306 35 HOH HOH . N 3 HOH D 12 307 40 HOH HOH . N 3 HOH D 13 308 46 HOH HOH . N 3 HOH D 14 309 48 HOH HOH . N 3 HOH D 15 310 50 HOH HOH . N 3 HOH D 16 311 55 HOH HOH . N 3 HOH D 17 312 63 HOH HOH . N 3 HOH D 18 313 68 HOH HOH . N 3 HOH D 19 314 69 HOH HOH . N 3 HOH D 20 315 83 HOH HOH . N 3 HOH D 21 316 85 HOH HOH . N 3 HOH D 22 317 90 HOH HOH . N 3 HOH D 23 318 92 HOH HOH . N 3 HOH D 24 319 104 HOH HOH . N 3 HOH D 25 320 105 HOH HOH . N 3 HOH D 26 321 106 HOH HOH . N 3 HOH D 27 322 107 HOH HOH . N 3 HOH D 28 323 111 HOH HOH . N 3 HOH D 29 324 117 HOH HOH . N 3 HOH D 30 325 120 HOH HOH . N 3 HOH D 31 326 122 HOH HOH . N 3 HOH D 32 327 126 HOH HOH . N 3 HOH D 33 328 128 HOH HOH . N 3 HOH D 34 329 129 HOH HOH . N 3 HOH D 35 330 131 HOH HOH . N 3 HOH D 36 331 133 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 2 _atom_site.Cartn_x -2.798 _atom_site.Cartn_y 46.1 _atom_site.Cartn_z 16.67 _atom_site.occupancy 0.3 _atom_site.B_iso_or_equiv 37.84 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU _atom_site.auth_seq_id 298 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #