data_2B92 # _model_server_result.job_id fL-S7f201loK_ruUwfZ2AA _model_server_result.datetime_utc '2024-11-26 00:05:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2b92 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":595}' # _entry.id 2B92 # _exptl.entry_id 2B92 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2B92 _cell.length_a 148.82 _cell.length_b 103.921 _cell.length_c 55.485 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2B92 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 63 A SER 52 1_555 C MG MG . A MG 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc2 A OG1 THR 86 A THR 75 1_555 C MG MG . A MG 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc3 D O3B GDP . A GDP 593 1_555 E AL AF3 . A AF3 594 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc4 D O2B GDP . A GDP 593 1_555 E AL AF3 . A AF3 594 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.421 ? metalc ? metalc5 D O2B GDP . A GDP 593 1_555 C MG MG . A MG 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? metalc ? metalc6 E F1 AF3 . A AF3 594 1_555 C MG MG . A MG 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.931 ? metalc ? metalc7 E AL AF3 . A AF3 594 1_555 C MG MG . A MG 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.358 ? metalc ? metalc8 E AL AF3 . A AF3 594 1_555 I O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc9 B OG SER 63 B SER 52 1_555 F MG MG . B MG 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc10 B OG1 THR 86 B THR 75 1_555 F MG MG . B MG 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc11 G O3B GDP . B GDP 593 1_555 H AL AF3 . B AF3 594 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc12 G O2B GDP . B GDP 593 1_555 H AL AF3 . B AF3 594 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.332 ? metalc ? metalc13 G O2B GDP . B GDP 593 1_555 F MG MG . B MG 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.916 ? metalc ? metalc14 H F3 AF3 . B AF3 594 1_555 F MG MG . B MG 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc15 H AL AF3 . B AF3 594 1_555 F MG MG . B MG 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.253 ? metalc ? metalc16 H AL AF3 . B AF3 594 1_555 J O HOH . B HOH 599 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2B92 _atom_sites.fract_transf_matrix[1][1] 0.00672 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009623 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018023 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 595 595 MG MG . D 3 GDP A 1 593 593 GDP GDP . E 4 AF3 A 1 594 594 AF3 AF3 . F 2 MG B 1 595 595 MG MG . G 3 GDP B 1 593 593 GDP GDP . H 4 AF3 B 1 594 594 AF3 AF3 . I 5 HOH A 1 596 3 HOH HOH . I 5 HOH A 2 597 4 HOH HOH . I 5 HOH A 3 598 5 HOH HOH . I 5 HOH A 4 599 6 HOH HOH . I 5 HOH A 5 600 7 HOH HOH . I 5 HOH A 6 601 9 HOH HOH . I 5 HOH A 7 602 10 HOH HOH . I 5 HOH A 8 603 12 HOH HOH . I 5 HOH A 9 604 13 HOH HOH . J 5 HOH B 1 596 1 HOH HOH . J 5 HOH B 2 597 2 HOH HOH . J 5 HOH B 3 598 8 HOH HOH . J 5 HOH B 4 599 11 HOH HOH . J 5 HOH B 5 600 14 HOH HOH . J 5 HOH B 6 601 15 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x 81.496 _atom_site.Cartn_y 39.427 _atom_site.Cartn_z 9.455 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 43.63 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 595 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #