data_2B97 # _model_server_result.job_id '_WI7qy_stLsElGxlUmGHYA' _model_server_result.datetime_utc '2025-03-06 01:09:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2b97 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 2B97 # _exptl.entry_id 2B97 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.64 _cell.angle_gamma 90 _cell.entry_id 2B97 _cell.length_a 78.544 _cell.length_b 46.254 _cell.length_c 34.687 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2B97 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D 1 1 B,E 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 3 A CYS 3 1_555 A SG CYS 52 A CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? disulf ? disulf2 A SG CYS 13 A CYS 13 1_555 A SG CYS 43 A CYS 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? disulf ? disulf3 A SG CYS 14 A CYS 14 1_555 A SG CYS 26 A CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf4 A SG CYS 53 A CYS 53 1_555 A SG CYS 64 A CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf5 B SG CYS 3 B CYS 3 1_555 B SG CYS 52 B CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf6 B SG CYS 13 B CYS 13 1_555 B SG CYS 43 B CYS 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? disulf ? disulf7 B SG CYS 14 B CYS 14 1_555 B SG CYS 26 B CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf8 B SG CYS 53 B CYS 53 1_555 B SG CYS 64 B CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc1 A OD1 ASP 25 A ASP 25 1_555 C MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc2 A OD2 ASP 34 A ASP 34 4_546 C MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? metalc ? metalc3 A OE1 GLN 60 A GLN 60 1_555 C MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? metalc ? metalc4 C MN MN . A MN 301 1_555 D O HOH . A HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc5 C MN MN . A MN 301 1_555 D O HOH . A HOH 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc6 C MN MN . A MN 301 1_555 B OD2 ASP 25 B ASP 25 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2B97 _atom_sites.fract_transf_matrix[1][1] 0.012732 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005051 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02162 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.031015 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MN A 1 301 1 MN IUM . D 3 HOH A 1 302 2 HOH HOH . D 3 HOH A 2 303 3 HOH HOH . D 3 HOH A 3 304 4 HOH HOH . D 3 HOH A 4 305 5 HOH HOH . D 3 HOH A 5 306 6 HOH HOH . D 3 HOH A 6 307 11 HOH HOH . D 3 HOH A 7 308 12 HOH HOH . D 3 HOH A 8 309 13 HOH HOH . D 3 HOH A 9 310 14 HOH HOH . D 3 HOH A 10 311 16 HOH HOH . D 3 HOH A 11 312 18 HOH HOH . D 3 HOH A 12 313 22 HOH HOH . D 3 HOH A 13 314 24 HOH HOH . D 3 HOH A 14 315 25 HOH HOH . D 3 HOH A 15 316 26 HOH HOH . D 3 HOH A 16 317 27 HOH HOH . D 3 HOH A 17 318 31 HOH HOH . D 3 HOH A 18 319 33 HOH HOH . D 3 HOH A 19 320 35 HOH HOH . D 3 HOH A 20 321 36 HOH HOH . D 3 HOH A 21 322 37 HOH HOH . D 3 HOH A 22 323 38 HOH HOH . D 3 HOH A 23 324 41 HOH HOH . D 3 HOH A 24 325 43 HOH HOH . D 3 HOH A 25 326 44 HOH HOH . D 3 HOH A 26 327 46 HOH HOH . D 3 HOH A 27 328 47 HOH HOH . D 3 HOH A 28 329 52 HOH HOH . D 3 HOH A 29 330 54 HOH HOH . D 3 HOH A 30 331 56 HOH HOH . D 3 HOH A 31 332 57 HOH HOH . D 3 HOH A 32 333 58 HOH HOH . D 3 HOH A 33 334 60 HOH HOH . D 3 HOH A 34 335 61 HOH HOH . D 3 HOH A 35 336 63 HOH HOH . D 3 HOH A 36 337 64 HOH HOH . D 3 HOH A 37 338 66 HOH HOH . D 3 HOH A 38 339 67 HOH HOH . D 3 HOH A 39 340 69 HOH HOH . D 3 HOH A 40 341 70 HOH HOH . D 3 HOH A 41 342 71 HOH HOH . D 3 HOH A 42 343 78 HOH HOH . D 3 HOH A 43 344 79 HOH HOH . D 3 HOH A 44 345 80 HOH HOH . D 3 HOH A 45 346 83 HOH HOH . D 3 HOH A 46 347 84 HOH HOH . D 3 HOH A 47 348 85 HOH HOH . D 3 HOH A 48 349 86 HOH HOH . D 3 HOH A 49 350 88 HOH HOH . D 3 HOH A 50 351 89 HOH HOH . D 3 HOH A 51 352 91 HOH HOH . D 3 HOH A 52 353 93 HOH HOH . D 3 HOH A 53 354 98 HOH HOH . D 3 HOH A 54 355 103 HOH HOH . D 3 HOH A 55 356 104 HOH HOH . D 3 HOH A 56 357 106 HOH HOH . D 3 HOH A 57 358 107 HOH HOH . D 3 HOH A 58 359 108 HOH HOH . D 3 HOH A 59 360 110 HOH HOH . D 3 HOH A 60 361 115 HOH HOH . D 3 HOH A 61 362 116 HOH HOH . D 3 HOH A 62 363 117 HOH HOH . D 3 HOH A 63 364 118 HOH HOH . D 3 HOH A 64 365 121 HOH HOH . D 3 HOH A 65 366 122 HOH HOH . D 3 HOH A 66 367 123 HOH HOH . D 3 HOH A 67 368 126 HOH HOH . D 3 HOH A 68 369 127 HOH HOH . D 3 HOH A 69 370 128 HOH HOH . D 3 HOH A 70 371 129 HOH HOH . D 3 HOH A 71 372 131 HOH HOH . D 3 HOH A 72 373 132 HOH HOH . D 3 HOH A 73 374 136 HOH HOH . D 3 HOH A 74 375 138 HOH HOH . D 3 HOH A 75 376 139 HOH HOH . D 3 HOH A 76 377 140 HOH HOH . D 3 HOH A 77 378 142 HOH HOH . D 3 HOH A 78 379 146 HOH HOH . D 3 HOH A 79 380 147 HOH HOH . D 3 HOH A 80 381 149 HOH HOH . D 3 HOH A 81 382 151 HOH HOH . D 3 HOH A 82 383 152 HOH HOH . D 3 HOH A 83 384 153 HOH HOH . D 3 HOH A 84 385 154 HOH HOH . D 3 HOH A 85 386 156 HOH HOH . D 3 HOH A 86 387 158 HOH HOH . D 3 HOH A 87 388 162 HOH HOH . D 3 HOH A 88 389 173 HOH HOH . D 3 HOH A 89 390 176 HOH HOH . D 3 HOH A 90 391 177 HOH HOH . D 3 HOH A 91 392 178 HOH HOH . D 3 HOH A 92 393 179 HOH HOH . D 3 HOH A 93 394 180 HOH HOH . D 3 HOH A 94 395 181 HOH HOH . D 3 HOH A 95 396 184 HOH HOH . D 3 HOH A 96 397 186 HOH HOH . D 3 HOH A 97 398 187 HOH HOH . D 3 HOH A 98 399 191 HOH HOH . D 3 HOH A 99 400 192 HOH HOH . D 3 HOH A 100 401 201 HOH HOH . D 3 HOH A 101 402 202 HOH HOH . D 3 HOH A 102 403 205 HOH HOH . D 3 HOH A 103 404 206 HOH HOH . D 3 HOH A 104 405 208 HOH HOH . D 3 HOH A 105 406 212 HOH HOH . D 3 HOH A 106 407 213 HOH HOH . D 3 HOH A 107 408 215 HOH HOH . D 3 HOH A 108 409 216 HOH HOH . D 3 HOH A 109 410 218 HOH HOH . D 3 HOH A 110 411 222 HOH HOH . D 3 HOH A 111 412 224 HOH HOH . D 3 HOH A 112 413 225 HOH HOH . D 3 HOH A 113 414 230 HOH HOH . D 3 HOH A 114 415 231 HOH HOH . D 3 HOH A 115 416 232 HOH HOH . D 3 HOH A 116 417 233 HOH HOH . D 3 HOH A 117 418 236 HOH HOH . D 3 HOH A 118 419 238 HOH HOH . D 3 HOH A 119 420 240 HOH HOH . D 3 HOH A 120 421 241 HOH HOH . D 3 HOH A 121 422 242 HOH HOH . D 3 HOH A 122 423 243 HOH HOH . D 3 HOH A 123 424 244 HOH HOH . D 3 HOH A 124 425 247 HOH HOH . D 3 HOH A 125 426 249 HOH HOH . D 3 HOH A 126 427 251 HOH HOH . D 3 HOH A 127 428 252 HOH HOH . D 3 HOH A 128 429 256 HOH HOH . E 3 HOH B 1 72 1 HOH HOH . E 3 HOH B 2 73 7 HOH HOH . E 3 HOH B 3 74 8 HOH HOH . E 3 HOH B 4 75 9 HOH HOH . E 3 HOH B 5 76 10 HOH HOH . E 3 HOH B 6 77 15 HOH HOH . E 3 HOH B 7 78 17 HOH HOH . E 3 HOH B 8 79 19 HOH HOH . E 3 HOH B 9 80 20 HOH HOH . E 3 HOH B 10 81 21 HOH HOH . E 3 HOH B 11 82 23 HOH HOH . E 3 HOH B 12 83 28 HOH HOH . E 3 HOH B 13 84 29 HOH HOH . E 3 HOH B 14 85 30 HOH HOH . E 3 HOH B 15 86 32 HOH HOH . E 3 HOH B 16 87 34 HOH HOH . E 3 HOH B 17 88 39 HOH HOH . E 3 HOH B 18 89 40 HOH HOH . E 3 HOH B 19 90 42 HOH HOH . E 3 HOH B 20 91 45 HOH HOH . E 3 HOH B 21 92 48 HOH HOH . E 3 HOH B 22 93 49 HOH HOH . E 3 HOH B 23 94 50 HOH HOH . E 3 HOH B 24 95 51 HOH HOH . E 3 HOH B 25 96 53 HOH HOH . E 3 HOH B 26 97 55 HOH HOH . E 3 HOH B 27 98 59 HOH HOH . E 3 HOH B 28 99 62 HOH HOH . E 3 HOH B 29 100 65 HOH HOH . E 3 HOH B 30 101 68 HOH HOH . E 3 HOH B 31 102 72 HOH HOH . E 3 HOH B 32 103 73 HOH HOH . E 3 HOH B 33 104 74 HOH HOH . E 3 HOH B 34 105 75 HOH HOH . E 3 HOH B 35 106 76 HOH HOH . E 3 HOH B 36 107 77 HOH HOH . E 3 HOH B 37 108 81 HOH HOH . E 3 HOH B 38 109 82 HOH HOH . E 3 HOH B 39 110 87 HOH HOH . E 3 HOH B 40 111 90 HOH HOH . E 3 HOH B 41 112 92 HOH HOH . E 3 HOH B 42 113 94 HOH HOH . E 3 HOH B 43 114 95 HOH HOH . E 3 HOH B 44 115 96 HOH HOH . E 3 HOH B 45 116 97 HOH HOH . E 3 HOH B 46 117 99 HOH HOH . E 3 HOH B 47 118 100 HOH HOH . E 3 HOH B 48 119 101 HOH HOH . E 3 HOH B 49 120 102 HOH HOH . E 3 HOH B 50 121 105 HOH HOH . E 3 HOH B 51 122 109 HOH HOH . E 3 HOH B 52 123 111 HOH HOH . E 3 HOH B 53 124 112 HOH HOH . E 3 HOH B 54 125 113 HOH HOH . E 3 HOH B 55 126 114 HOH HOH . E 3 HOH B 56 127 119 HOH HOH . E 3 HOH B 57 128 120 HOH HOH . E 3 HOH B 58 129 124 HOH HOH . E 3 HOH B 59 130 125 HOH HOH . E 3 HOH B 60 131 130 HOH HOH . E 3 HOH B 61 132 133 HOH HOH . E 3 HOH B 62 133 134 HOH HOH . E 3 HOH B 63 134 135 HOH HOH . E 3 HOH B 64 135 137 HOH HOH . E 3 HOH B 65 136 141 HOH HOH . E 3 HOH B 66 137 143 HOH HOH . E 3 HOH B 67 138 144 HOH HOH . E 3 HOH B 68 139 145 HOH HOH . E 3 HOH B 69 140 148 HOH HOH . E 3 HOH B 70 141 150 HOH HOH . E 3 HOH B 71 142 155 HOH HOH . E 3 HOH B 72 143 157 HOH HOH . E 3 HOH B 73 144 159 HOH HOH . E 3 HOH B 74 145 160 HOH HOH . E 3 HOH B 75 146 161 HOH HOH . E 3 HOH B 76 147 163 HOH HOH . E 3 HOH B 77 148 164 HOH HOH . E 3 HOH B 78 149 165 HOH HOH . E 3 HOH B 79 150 166 HOH HOH . E 3 HOH B 80 151 167 HOH HOH . E 3 HOH B 81 152 168 HOH HOH . E 3 HOH B 82 153 169 HOH HOH . E 3 HOH B 83 154 170 HOH HOH . E 3 HOH B 84 155 171 HOH HOH . E 3 HOH B 85 156 172 HOH HOH . E 3 HOH B 86 157 174 HOH HOH . E 3 HOH B 87 158 175 HOH HOH . E 3 HOH B 88 159 182 HOH HOH . E 3 HOH B 89 160 183 HOH HOH . E 3 HOH B 90 161 185 HOH HOH . E 3 HOH B 91 162 188 HOH HOH . E 3 HOH B 92 163 189 HOH HOH . E 3 HOH B 93 164 190 HOH HOH . E 3 HOH B 94 165 193 HOH HOH . E 3 HOH B 95 166 194 HOH HOH . E 3 HOH B 96 167 195 HOH HOH . E 3 HOH B 97 168 196 HOH HOH . E 3 HOH B 98 169 197 HOH HOH . E 3 HOH B 99 170 198 HOH HOH . E 3 HOH B 100 171 199 HOH HOH . E 3 HOH B 101 172 200 HOH HOH . E 3 HOH B 102 173 203 HOH HOH . E 3 HOH B 103 174 204 HOH HOH . E 3 HOH B 104 175 207 HOH HOH . E 3 HOH B 105 176 209 HOH HOH . E 3 HOH B 106 177 210 HOH HOH . E 3 HOH B 107 178 211 HOH HOH . E 3 HOH B 108 179 214 HOH HOH . E 3 HOH B 109 180 217 HOH HOH . E 3 HOH B 110 181 219 HOH HOH . E 3 HOH B 111 182 220 HOH HOH . E 3 HOH B 112 183 221 HOH HOH . E 3 HOH B 113 184 223 HOH HOH . E 3 HOH B 114 185 226 HOH HOH . E 3 HOH B 115 186 227 HOH HOH . E 3 HOH B 116 187 228 HOH HOH . E 3 HOH B 117 188 229 HOH HOH . E 3 HOH B 118 189 234 HOH HOH . E 3 HOH B 119 190 235 HOH HOH . E 3 HOH B 120 191 237 HOH HOH . E 3 HOH B 121 192 239 HOH HOH . E 3 HOH B 122 193 245 HOH HOH . E 3 HOH B 123 194 246 HOH HOH . E 3 HOH B 124 195 248 HOH HOH . E 3 HOH B 125 196 250 HOH HOH . E 3 HOH B 126 197 253 HOH HOH . E 3 HOH B 127 198 254 HOH HOH . E 3 HOH B 128 199 255 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 12.474 _atom_site.Cartn_y -0.031 _atom_site.Cartn_z 6.687 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 4.45 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 443 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #