data_2B9I # _model_server_result.job_id gCjdEyjEwIRUHOmEubGD8w _model_server_result.datetime_utc '2025-02-27 02:13:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2b9i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":700}' # _entry.id 2B9I # _exptl.entry_id 2B9I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2B9I _cell.length_a 58.081 _cell.length_b 63.618 _cell.length_c 99.95 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2B9I _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 142 A ASN 142 1_555 C MG MG . A MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc2 A OD2 ASP 155 A ASP 155 1_555 C MG MG . A MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc3 D O3B ADP . A ADP 500 1_555 C MG MG . A MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc4 D O2A ADP . A ADP 500 1_555 C MG MG . A MG 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc5 C MG MG . A MG 700 1_555 E O HOH . A HOH 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc6 C MG MG . A MG 700 1_555 E O HOH . A HOH 787 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.747 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2B9I _atom_sites.fract_transf_matrix[1][1] 0.017217 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015719 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010005 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG A 1 700 700 MG MG2 . D 4 ADP A 1 500 500 ADP ADP . E 5 HOH A 1 701 1 HOH HOH . E 5 HOH A 2 702 2 HOH HOH . E 5 HOH A 3 703 3 HOH HOH . E 5 HOH A 4 704 4 HOH HOH . E 5 HOH A 5 705 5 HOH HOH . E 5 HOH A 6 706 6 HOH HOH . E 5 HOH A 7 707 7 HOH HOH . E 5 HOH A 8 708 8 HOH HOH . E 5 HOH A 9 709 9 HOH HOH . E 5 HOH A 10 710 10 HOH HOH . E 5 HOH A 11 711 11 HOH HOH . E 5 HOH A 12 712 12 HOH HOH . E 5 HOH A 13 713 13 HOH HOH . E 5 HOH A 14 714 14 HOH HOH . E 5 HOH A 15 715 15 HOH HOH . E 5 HOH A 16 716 16 HOH HOH . E 5 HOH A 17 717 17 HOH HOH . E 5 HOH A 18 718 18 HOH HOH . E 5 HOH A 19 719 19 HOH HOH . E 5 HOH A 20 720 20 HOH HOH . E 5 HOH A 21 721 21 HOH HOH . E 5 HOH A 22 722 22 HOH HOH . E 5 HOH A 23 723 23 HOH HOH . E 5 HOH A 24 724 24 HOH HOH . E 5 HOH A 25 725 25 HOH HOH . E 5 HOH A 26 726 26 HOH HOH . E 5 HOH A 27 727 27 HOH HOH . E 5 HOH A 28 728 28 HOH HOH . E 5 HOH A 29 729 29 HOH HOH . E 5 HOH A 30 730 30 HOH HOH . E 5 HOH A 31 731 31 HOH HOH . E 5 HOH A 32 732 33 HOH HOH . E 5 HOH A 33 733 34 HOH HOH . E 5 HOH A 34 734 35 HOH HOH . E 5 HOH A 35 735 36 HOH HOH . E 5 HOH A 36 736 37 HOH HOH . E 5 HOH A 37 737 38 HOH HOH . E 5 HOH A 38 738 39 HOH HOH . E 5 HOH A 39 739 40 HOH HOH . E 5 HOH A 40 740 41 HOH HOH . E 5 HOH A 41 741 42 HOH HOH . E 5 HOH A 42 742 43 HOH HOH . E 5 HOH A 43 743 44 HOH HOH . E 5 HOH A 44 744 45 HOH HOH . E 5 HOH A 45 745 46 HOH HOH . E 5 HOH A 46 746 47 HOH HOH . E 5 HOH A 47 747 48 HOH HOH . E 5 HOH A 48 748 49 HOH HOH . E 5 HOH A 49 749 50 HOH HOH . E 5 HOH A 50 750 51 HOH HOH . E 5 HOH A 51 751 52 HOH HOH . E 5 HOH A 52 752 53 HOH HOH . E 5 HOH A 53 753 54 HOH HOH . E 5 HOH A 54 754 55 HOH HOH . E 5 HOH A 55 755 56 HOH HOH . E 5 HOH A 56 756 57 HOH HOH . E 5 HOH A 57 757 58 HOH HOH . E 5 HOH A 58 758 59 HOH HOH . E 5 HOH A 59 759 60 HOH HOH . E 5 HOH A 60 760 61 HOH HOH . E 5 HOH A 61 761 62 HOH HOH . E 5 HOH A 62 762 63 HOH HOH . E 5 HOH A 63 763 64 HOH HOH . E 5 HOH A 64 764 65 HOH HOH . E 5 HOH A 65 765 66 HOH HOH . E 5 HOH A 66 766 67 HOH HOH . E 5 HOH A 67 767 68 HOH HOH . E 5 HOH A 68 768 69 HOH HOH . E 5 HOH A 69 769 70 HOH HOH . E 5 HOH A 70 770 71 HOH HOH . E 5 HOH A 71 771 73 HOH HOH . E 5 HOH A 72 772 74 HOH HOH . E 5 HOH A 73 773 75 HOH HOH . E 5 HOH A 74 774 76 HOH HOH . E 5 HOH A 75 775 77 HOH HOH . E 5 HOH A 76 776 78 HOH HOH . E 5 HOH A 77 777 79 HOH HOH . E 5 HOH A 78 778 80 HOH HOH . E 5 HOH A 79 779 81 HOH HOH . E 5 HOH A 80 780 82 HOH HOH . E 5 HOH A 81 781 83 HOH HOH . E 5 HOH A 82 782 84 HOH HOH . E 5 HOH A 83 783 85 HOH HOH . E 5 HOH A 84 784 86 HOH HOH . E 5 HOH A 85 785 87 HOH HOH . E 5 HOH A 86 786 88 HOH HOH . E 5 HOH A 87 787 89 HOH HOH . E 5 HOH A 88 788 90 HOH HOH . E 5 HOH A 89 789 91 HOH HOH . E 5 HOH A 90 790 92 HOH HOH . E 5 HOH A 91 791 94 HOH HOH . F 5 HOH C 1 44 32 HOH HOH . F 5 HOH C 2 45 72 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 33.803 _atom_site.Cartn_y 5.163 _atom_site.Cartn_z 40.349 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 28.14 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 700 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 80 _model_server_stats.create_model_time_ms 38 _model_server_stats.query_time_ms 345 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #