data_2BAN # _model_server_result.job_id VlwdciRGfiOtTXRZ5MwE7A _model_server_result.datetime_utc '2024-11-05 06:59:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ban # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":562}' # _entry.id 2BAN # _exptl.entry_id 2BAN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 328.449 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-ETHYL-3-[(2-METHOXYETHYL)METHYLAMINO]-6-METHYL-4-(3-METHYLBENZYL)PYRIDIN-2(1H)-ONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.49 _cell.angle_gamma 90 _cell.entry_id 2BAN _cell.length_a 226.24 _cell.length_b 69.43 _cell.length_c 104.45 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BAN _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 443 A ASP 443 1_555 C MN MN . A MN 561 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc2 A OE2 GLU 478 A GLU 478 1_555 C MN MN . A MN 561 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc3 A OD2 ASP 498 A ASP 498 1_555 C MN MN . A MN 561 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc4 C MN MN . A MN 561 1_555 E O HOH . A HOH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? # _chem_comp.formula 'C20 H28 N2 O2' _chem_comp.formula_weight 328.449 _chem_comp.id 357 _chem_comp.mon_nstd_flag . _chem_comp.name 5-ETHYL-3-[(2-METHOXYETHYL)METHYLAMINO]-6-METHYL-4-(3-METHYLBENZYL)PYRIDIN-2(1H)-ONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 357 sing 1 n y C2 O8 357 doub 2 n n C2 N1 357 sing 3 n y C3 C4 357 doub 4 n y C3 N1' 357 sing 5 n n C4 C5 357 sing 6 n y C4 C7' 357 sing 7 n n C5 C10 357 sing 8 n n C5 C6 357 doub 9 n y C10 C11 357 sing 10 n n C10 H101 357 sing 11 n n C10 H102 357 sing 12 n n C11 H111 357 sing 13 n n C11 H112 357 sing 14 n n C11 H113 357 sing 15 n n C1' C7' 357 sing 16 n n C1' C6B 357 doub 17 n y C1' C2B 357 sing 18 n y C7' "H7'1" 357 sing 19 n n C7' "H7'2" 357 sing 20 n n C6 C7 357 sing 21 n n C6 N1 357 sing 22 n y C7 H71 357 sing 23 n n C7 H72 357 sing 24 n n C7 H73 357 sing 25 n n N1 HN1 357 sing 26 n n N1' C6' 357 sing 27 n n N1' C2' 357 sing 28 n n C6' "H6'1" 357 sing 29 n n C6' "H6'2" 357 sing 30 n n C6' "H6'3" 357 sing 31 n n C2' C3' 357 sing 32 n n C2' "H2'1" 357 sing 33 n n C2' "H2'2" 357 sing 34 n n C3' O4' 357 sing 35 n n C3' "H3'1" 357 sing 36 n n C3' "H3'2" 357 sing 37 n n O4' C5' 357 sing 38 n n C5' "H5'1" 357 sing 39 n n C5' "H5'2" 357 sing 40 n n C5' "H5'3" 357 sing 41 n n C6B C5B 357 sing 42 n y C6B H6' 357 sing 43 n n C5B C4' 357 doub 44 n y C5B H5' 357 sing 45 n n C4' C3B 357 sing 46 n y C4' H4' 357 sing 47 n n C3B C8' 357 sing 48 n n C3B C2B 357 doub 49 n y C8' "H8'1" 357 sing 50 n n C8' "H8'2" 357 sing 51 n n C8' "H8'3" 357 sing 52 n n C2B H2' 357 sing 53 n n # _atom_sites.entry_id 2BAN _atom_sites.fract_transf_matrix[1][1] 0.00442 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001308 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014403 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009985 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MN A 1 561 2 MN MN . D 4 357 A 1 562 1 357 357 . E 5 HOH A 1 1001 1001 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 357 . . . D 4 144.025 -25.427 70.847 1 74.84 ? C2 357 562 A 1 HETATM 2 C C3 357 . . . D 4 144.972 -25.085 71.861 1 76.65 ? C3 357 562 A 1 HETATM 3 C C4 357 . . . D 4 144.762 -25.575 73.195 1 75.95 ? C4 357 562 A 1 HETATM 4 C C5 357 . . . D 4 143.628 -26.419 73.476 1 74.75 ? C5 357 562 A 1 HETATM 5 O O8 357 . . . D 4 144.17 -25.011 69.643 1 72.89 ? O8 357 562 A 1 HETATM 6 C C10 357 . . . D 4 143.377 -26.983 74.894 1 75.68 ? C10 357 562 A 1 HETATM 7 C C11 357 . . . D 4 142.351 -26.144 75.674 1 82.33 ? C11 357 562 A 1 HETATM 8 C C1' 357 . . . D 4 145.28 -24.114 75.278 1 83.59 ? C1' 357 562 A 1 HETATM 9 C C7' 357 . . . D 4 145.788 -25.193 74.287 1 78.54 ? C7' 357 562 A 1 HETATM 10 C C6 357 . . . D 4 142.725 -26.708 72.399 1 75.98 ? C6 357 562 A 1 HETATM 11 C C7 357 . . . D 4 141.492 -27.579 72.594 1 77.96 ? C7 357 562 A 1 HETATM 12 N N1 357 . . . D 4 142.962 -26.217 71.144 1 76.01 ? N1 357 562 A 1 HETATM 13 N N1' 357 . . . D 4 146.104 -24.251 71.579 1 78.54 ? N1' 357 562 A 1 HETATM 14 C C6' 357 . . . D 4 147.198 -24.889 70.846 1 79.53 ? C6' 357 562 A 1 HETATM 15 C C2' 357 . . . D 4 145.858 -22.962 70.852 1 82.4 ? C2' 357 562 A 1 HETATM 16 C C3' 357 . . . D 4 144.963 -22.011 71.678 1 83.41 ? C3' 357 562 A 1 HETATM 17 O O4' 357 . . . D 4 144.762 -20.892 71.008 1 83.86 ? O4' 357 562 A 1 HETATM 18 C C5' 357 . . . D 4 144.065 -19.817 71.326 1 81.92 ? C5' 357 562 A 1 HETATM 19 C C6B 357 . . . D 4 145.838 -24.087 76.574 1 84.81 ? C6B 357 562 A 1 HETATM 20 C C5B 357 . . . D 4 145.423 -23.13 77.533 1 87.21 ? C5B 357 562 A 1 HETATM 21 C C4' 357 . . . D 4 144.429 -22.179 77.194 1 87.52 ? C4' 357 562 A 1 HETATM 22 C C3B 357 . . . D 4 143.852 -22.189 75.899 1 88.06 ? C3B 357 562 A 1 HETATM 23 C C8' 357 . . . D 4 142.787 -21.168 75.538 1 89.43 ? C8' 357 562 A 1 HETATM 24 C C2B 357 . . . D 4 144.273 -23.151 74.938 1 85.98 ? C2B 357 562 A 1 # _model_server_stats.io_time_ms 100 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 24 #