data_2BAW # _model_server_result.job_id 321hOKkcBGhHLZzW27LRgA _model_server_result.datetime_utc '2024-11-26 09:58:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2baw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":921}' # _entry.id 2BAW # _exptl.entry_id 2BAW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 278.342 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'heptyl beta-D-glucopyranoside' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.77 _cell.angle_gamma 90 _cell.entry_id 2BAW _cell.length_a 39.77 _cell.length_b 94.22 _cell.length_c 96.7 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2BAW _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,G 1 1 B,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C13 H26 O6' _chem_comp.formula_weight 278.342 _chem_comp.id B7G _chem_comp.mon_nstd_flag n _chem_comp.name 'heptyl beta-D-glucopyranoside' _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms 'HEPTYL-BETA-D-GLUCOPYRANOSIDE;heptyl beta-D-glucoside;heptyl D-glucoside;heptyl glucoside' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 O5 B7G sing 70 n n C5 C4 B7G sing 71 n n C5 C6 B7G sing 72 n n C5 H5 B7G sing 73 n n O5 C1 B7G sing 74 n n C1 C2 B7G sing 75 n n C1 O1 B7G sing 76 n n C1 H1 B7G sing 77 n n C2 C3 B7G sing 78 n n C2 O2 B7G sing 79 n n C2 H2 B7G sing 80 n n C3 C4 B7G sing 81 n n C3 O3 B7G sing 82 n n C3 H3 B7G sing 83 n n C4 O4 B7G sing 84 n n C4 H4 B7G sing 85 n n C6 O6 B7G sing 86 n n C6 H61 B7G sing 87 n n C6 H62 B7G sing 88 n n O1 C7 B7G sing 89 n n C7 C8 B7G sing 90 n n C7 H71 B7G sing 91 n n C7 H72 B7G sing 92 n n C8 C9 B7G sing 93 n n C8 H81 B7G sing 94 n n C8 H82 B7G sing 95 n n C9 C10 B7G sing 96 n n C9 H91 B7G sing 97 n n C9 H92 B7G sing 98 n n C10 C11 B7G sing 99 n n C10 H101 B7G sing 100 n n C10 H102 B7G sing 101 n n C11 C12 B7G sing 102 n n C11 H111 B7G sing 103 n n C11 H112 B7G sing 104 n n C12 C13 B7G sing 105 n n C12 H121 B7G sing 106 n n C12 H122 B7G sing 107 n n O2 HO2 B7G sing 108 n n O3 HO3 B7G sing 109 n n O4 HO4 B7G sing 110 n n O6 HO6 B7G sing 111 n n C13 H131 B7G sing 112 n n C13 H132 B7G sing 113 n n C13 H133 B7G sing 114 n n # _pdbx_chem_comp_identifier.comp_id B7G _pdbx_chem_comp_identifier.identifier heptyl-b-D-Glucopyranoside _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 2BAW _atom_sites.fract_transf_matrix[1][1] 0.02514 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00343 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01061 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01044 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 B7G A 1 920 920 B7G B7G . D 2 B7G A 1 921 921 B7G B7G . E 3 VCA A 1 201 201 VCA VCA . F 3 VCA B 1 478 301 VCA VCA . G 4 HOH A 1 922 1 HOH HOH . G 4 HOH A 2 923 2 HOH HOH . G 4 HOH A 3 924 4 HOH HOH . G 4 HOH A 4 925 6 HOH HOH . G 4 HOH A 5 926 7 HOH HOH . G 4 HOH A 6 927 8 HOH HOH . G 4 HOH A 7 928 9 HOH HOH . G 4 HOH A 8 929 10 HOH HOH . G 4 HOH A 9 930 12 HOH HOH . G 4 HOH A 10 931 15 HOH HOH . G 4 HOH A 11 932 16 HOH HOH . G 4 HOH A 12 933 17 HOH HOH . G 4 HOH A 13 934 18 HOH HOH . G 4 HOH A 14 935 19 HOH HOH . G 4 HOH A 15 936 21 HOH HOH . G 4 HOH A 16 937 22 HOH HOH . G 4 HOH A 17 938 23 HOH HOH . G 4 HOH A 18 939 24 HOH HOH . G 4 HOH A 19 940 28 HOH HOH . G 4 HOH A 20 941 32 HOH HOH . G 4 HOH A 21 942 35 HOH HOH . G 4 HOH A 22 943 36 HOH HOH . G 4 HOH A 23 944 40 HOH HOH . G 4 HOH A 24 945 41 HOH HOH . G 4 HOH A 25 946 46 HOH HOH . G 4 HOH A 26 947 47 HOH HOH . G 4 HOH A 27 948 49 HOH HOH . G 4 HOH A 28 949 50 HOH HOH . G 4 HOH A 29 950 53 HOH HOH . G 4 HOH A 30 951 54 HOH HOH . G 4 HOH A 31 952 55 HOH HOH . G 4 HOH A 32 953 56 HOH HOH . G 4 HOH A 33 954 58 HOH HOH . G 4 HOH A 34 955 60 HOH HOH . G 4 HOH A 35 956 63 HOH HOH . G 4 HOH A 36 957 65 HOH HOH . G 4 HOH A 37 958 66 HOH HOH . G 4 HOH A 38 959 70 HOH HOH . G 4 HOH A 39 960 71 HOH HOH . G 4 HOH A 40 961 73 HOH HOH . G 4 HOH A 41 962 74 HOH HOH . G 4 HOH A 42 963 76 HOH HOH . G 4 HOH A 43 964 77 HOH HOH . G 4 HOH A 44 965 81 HOH HOH . G 4 HOH A 45 966 82 HOH HOH . G 4 HOH A 46 967 85 HOH HOH . G 4 HOH A 47 968 88 HOH HOH . G 4 HOH A 48 969 92 HOH HOH . G 4 HOH A 49 970 96 HOH HOH . G 4 HOH A 50 971 98 HOH HOH . G 4 HOH A 51 972 100 HOH HOH . G 4 HOH A 52 973 101 HOH HOH . G 4 HOH A 53 974 103 HOH HOH . G 4 HOH A 54 975 105 HOH HOH . G 4 HOH A 55 976 107 HOH HOH . G 4 HOH A 56 977 108 HOH HOH . G 4 HOH A 57 978 109 HOH HOH . G 4 HOH A 58 979 110 HOH HOH . G 4 HOH A 59 980 112 HOH HOH . G 4 HOH A 60 981 116 HOH HOH . G 4 HOH A 61 982 117 HOH HOH . G 4 HOH A 62 983 118 HOH HOH . G 4 HOH A 63 984 119 HOH HOH . G 4 HOH A 64 985 120 HOH HOH . G 4 HOH A 65 986 127 HOH HOH . G 4 HOH A 66 987 128 HOH HOH . G 4 HOH A 67 988 130 HOH HOH . G 4 HOH A 68 989 131 HOH HOH . G 4 HOH A 69 990 132 HOH HOH . G 4 HOH A 70 991 134 HOH HOH . G 4 HOH A 71 992 137 HOH HOH . G 4 HOH A 72 993 138 HOH HOH . G 4 HOH A 73 994 143 HOH HOH . G 4 HOH A 74 995 146 HOH HOH . G 4 HOH A 75 996 147 HOH HOH . G 4 HOH A 76 997 149 HOH HOH . G 4 HOH A 77 998 151 HOH HOH . G 4 HOH A 78 999 152 HOH HOH . G 4 HOH A 79 1000 155 HOH HOH . G 4 HOH A 80 1001 156 HOH HOH . G 4 HOH A 81 1002 157 HOH HOH . G 4 HOH A 82 1003 159 HOH HOH . G 4 HOH A 83 1004 161 HOH HOH . H 4 HOH B 1 479 3 HOH HOH . H 4 HOH B 2 480 5 HOH HOH . H 4 HOH B 3 481 11 HOH HOH . H 4 HOH B 4 482 13 HOH HOH . H 4 HOH B 5 483 14 HOH HOH . H 4 HOH B 6 484 20 HOH HOH . H 4 HOH B 7 485 25 HOH HOH . H 4 HOH B 8 486 26 HOH HOH . H 4 HOH B 9 487 27 HOH HOH . H 4 HOH B 10 488 29 HOH HOH . H 4 HOH B 11 489 30 HOH HOH . H 4 HOH B 12 490 31 HOH HOH . H 4 HOH B 13 491 33 HOH HOH . H 4 HOH B 14 492 34 HOH HOH . H 4 HOH B 15 493 37 HOH HOH . H 4 HOH B 16 494 38 HOH HOH . H 4 HOH B 17 495 39 HOH HOH . H 4 HOH B 18 496 42 HOH HOH . H 4 HOH B 19 497 43 HOH HOH . H 4 HOH B 20 498 44 HOH HOH . H 4 HOH B 21 499 45 HOH HOH . H 4 HOH B 22 500 48 HOH HOH . H 4 HOH B 23 501 51 HOH HOH . H 4 HOH B 24 502 52 HOH HOH . H 4 HOH B 25 503 57 HOH HOH . H 4 HOH B 26 504 59 HOH HOH . H 4 HOH B 27 505 61 HOH HOH . H 4 HOH B 28 506 62 HOH HOH . H 4 HOH B 29 507 64 HOH HOH . H 4 HOH B 30 508 67 HOH HOH . H 4 HOH B 31 509 68 HOH HOH . H 4 HOH B 32 510 69 HOH HOH . H 4 HOH B 33 511 72 HOH HOH . H 4 HOH B 34 512 75 HOH HOH . H 4 HOH B 35 513 78 HOH HOH . H 4 HOH B 36 514 79 HOH HOH . H 4 HOH B 37 515 80 HOH HOH . H 4 HOH B 38 516 83 HOH HOH . H 4 HOH B 39 517 84 HOH HOH . H 4 HOH B 40 518 86 HOH HOH . H 4 HOH B 41 519 87 HOH HOH . H 4 HOH B 42 520 89 HOH HOH . H 4 HOH B 43 521 90 HOH HOH . H 4 HOH B 44 522 91 HOH HOH . H 4 HOH B 45 523 93 HOH HOH . H 4 HOH B 46 524 94 HOH HOH . H 4 HOH B 47 525 95 HOH HOH . H 4 HOH B 48 526 97 HOH HOH . H 4 HOH B 49 527 99 HOH HOH . H 4 HOH B 50 528 102 HOH HOH . H 4 HOH B 51 529 104 HOH HOH . H 4 HOH B 52 530 106 HOH HOH . H 4 HOH B 53 531 111 HOH HOH . H 4 HOH B 54 532 113 HOH HOH . H 4 HOH B 55 533 114 HOH HOH . H 4 HOH B 56 534 115 HOH HOH . H 4 HOH B 57 535 121 HOH HOH . H 4 HOH B 58 536 122 HOH HOH . H 4 HOH B 59 537 123 HOH HOH . H 4 HOH B 60 538 124 HOH HOH . H 4 HOH B 61 539 125 HOH HOH . H 4 HOH B 62 540 126 HOH HOH . H 4 HOH B 63 541 129 HOH HOH . H 4 HOH B 64 542 133 HOH HOH . H 4 HOH B 65 543 135 HOH HOH . H 4 HOH B 66 544 136 HOH HOH . H 4 HOH B 67 545 139 HOH HOH . H 4 HOH B 68 546 140 HOH HOH . H 4 HOH B 69 547 141 HOH HOH . H 4 HOH B 70 548 142 HOH HOH . H 4 HOH B 71 549 144 HOH HOH . H 4 HOH B 72 550 145 HOH HOH . H 4 HOH B 73 551 148 HOH HOH . H 4 HOH B 74 552 150 HOH HOH . H 4 HOH B 75 553 153 HOH HOH . H 4 HOH B 76 554 154 HOH HOH . H 4 HOH B 77 555 158 HOH HOH . H 4 HOH B 78 556 160 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 B7G . . . D 2 -9.289 -20.452 25.153 1 50.17 ? C5 B7G 921 A 1 HETATM 2 O O5 B7G . . . D 2 -9.062 -21.376 26.222 1 49.3 ? O5 B7G 921 A 1 HETATM 3 C C1 B7G . . . D 2 -9.816 -22.589 26.102 1 49.53 ? C1 B7G 921 A 1 HETATM 4 C C2 B7G . . . D 2 -11.306 -22.245 26.177 1 50.4 ? C2 B7G 921 A 1 HETATM 5 C C3 B7G . . . D 2 -11.65 -21.226 25.088 1 50.85 ? C3 B7G 921 A 1 HETATM 6 C C4 B7G . . . D 2 -10.75 -20 25.229 1 50.63 ? C4 B7G 921 A 1 HETATM 7 C C6 B7G . . . D 2 -8.25 -19.325 25.199 1 49.34 ? C6 B7G 921 A 1 HETATM 8 O O1 B7G . . . D 2 -9.436 -23.502 27.141 1 48.25 ? O1 B7G 921 A 1 HETATM 9 C C7 B7G . . . D 2 -8.318 -24.301 26.752 1 46.65 ? C7 B7G 921 A 1 HETATM 10 C C8 B7G . . . D 2 -7.646 -24.906 27.976 1 44.98 ? C8 B7G 921 A 1 HETATM 11 C C9 B7G . . . D 2 -6.368 -25.623 27.559 1 44.09 ? C9 B7G 921 A 1 HETATM 12 C C10 B7G . . . D 2 -5.137 -24.947 28.148 1 43.45 ? C10 B7G 921 A 1 HETATM 13 C C11 B7G . . . D 2 -4.008 -25.947 28.367 1 42.56 ? C11 B7G 921 A 1 HETATM 14 C C12 B7G . . . D 2 -2.651 -25.346 28.002 1 42.87 ? C12 B7G 921 A 1 HETATM 15 O O2 B7G . . . D 2 -12.119 -23.415 26.026 1 50.14 ? O2 B7G 921 A 1 HETATM 16 O O3 B7G . . . D 2 -13.034 -20.858 25.157 1 51.28 ? O3 B7G 921 A 1 HETATM 17 O O4 B7G . . . D 2 -11.023 -19.082 24.175 1 51.21 ? O4 B7G 921 A 1 HETATM 18 O O6 B7G . . . D 2 -8.73 -18.175 25.909 1 48.59 ? O6 B7G 921 A 1 HETATM 19 C C13 B7G . . . D 2 -1.928 -24.757 29.207 1 41.85 ? C13 B7G 921 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 19 #