data_2BCC
#
_model_server_result.job_id            G7-W4V7vfc7ifBpsIEUa4w 
_model_server_result.datetime_utc      '2024-11-23 05:49:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2bcc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":384}' 
#
_entry.id    2BCC 
#
_exptl.entry_id    2BCC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              744.034 
_entity.id                          13 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2BCC 
_cell.length_a            173.46 
_cell.length_b            182.45 
_cell.length_c            241.33 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2BCC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    decameric 
_pdbx_struct_assembly.oligomeric_count      10 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 13 N N N 
? 13 S N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 E SG CYS 144 E CYS 144 1_555 E SG CYS 160 E CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf2 H SG CYS 24 H CYS 24 1_555 H SG CYS 68 H CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf3 H SG CYS 40 H CYS 40 1_555 H SG CYS 54 H CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
covale ? covale1 D SG CYS 37 D CYS 37 1_555 Q CAB HEM . D HEM 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.781 ? 
covale ? covale2 D SG CYS 40 D CYS 40 1_555 Q CAC HEM . D HEM 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.776 ? 
metalc ? metalc1 C NE2 HIS 84 C HIS 84 1_555 K FE HEM . C HEM 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
metalc ? metalc2 C NE2 HIS 98 C HIS 98 1_555 L FE HEM . C HEM 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? 
metalc ? metalc3 C NE2 HIS 183 C HIS 183 1_555 K FE HEM . C HEM 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
metalc ? metalc4 C NE2 HIS 197 C HIS 197 1_555 L FE HEM . C HEM 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? 
metalc ? metalc5 D NE2 HIS 41 D HIS 41 1_555 Q FE HEM . D HEM 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
metalc ? metalc6 D SD MET 160 D MET 160 1_555 Q FE HEM . D HEM 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? 
metalc ? metalc7 E SG CYS 139 E CYS 139 1_555 R FE1 FES . E FES 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? 
metalc ? metalc8 E ND1 HIS 141 E HIS 141 1_555 R FE2 FES . E FES 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? 
metalc ? metalc9 E SG CYS 158 E CYS 158 1_555 R FE1 FES . E FES 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? 
metalc ? metalc10 E ND1 HIS 161 E HIS 161 1_555 R FE2 FES . E FES 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? 
#
_chem_comp.formula           'C41 H78 N O8 P' 
_chem_comp.formula_weight    744.034 
_chem_comp.id                PEE 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     DOPE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N C5 PEE sing 369 n n 
C5 C4 PEE sing 370 n n 
C4 O4P PEE sing 371 n n 
O4P P PEE sing 372 n n 
O1P P PEE doub 373 n n 
C1 O3P PEE sing 374 n n 
C1 C2 PEE sing 375 n n 
O3P P PEE sing 376 n n 
P O2P PEE sing 377 n n 
C2 C3 PEE sing 378 n n 
C2 O2 PEE sing 379 n n 
C3 O3 PEE sing 380 n n 
O2 C10 PEE sing 381 n n 
C31 C30 PEE sing 382 n n 
C31 C32 PEE sing 383 n n 
C33 C32 PEE sing 384 n n 
C33 C34 PEE sing 385 n n 
C30 O3 PEE sing 386 n n 
C30 O5 PEE doub 387 n n 
C10 O4 PEE doub 388 n n 
C10 C11 PEE sing 389 n n 
C34 C35 PEE sing 390 n n 
C11 C12 PEE sing 391 n n 
C35 C36 PEE sing 392 n n 
C36 C37 PEE sing 393 n n 
C37 C38 PEE sing 394 n n 
C38 C39 PEE doub 395 z n 
C12 C13 PEE sing 396 n n 
C39 C40 PEE sing 397 n n 
C13 C14 PEE sing 398 n n 
C14 C15 PEE sing 399 n n 
C40 C41 PEE sing 400 n n 
C15 C16 PEE sing 401 n n 
C41 C42 PEE sing 402 n n 
C16 C17 PEE sing 403 n n 
C42 C43 PEE sing 404 n n 
C17 C18 PEE sing 405 n n 
C43 C44 PEE sing 406 n n 
C18 C19 PEE doub 407 z n 
C46 C47 PEE sing 408 n n 
C46 C45 PEE sing 409 n n 
C44 C45 PEE sing 410 n n 
C19 C20 PEE sing 411 n n 
C20 C21 PEE sing 412 n n 
C21 C22 PEE sing 413 n n 
C22 C23 PEE sing 414 n n 
C23 C24 PEE sing 415 n n 
C24 C25 PEE sing 416 n n 
C26 C25 PEE sing 417 n n 
C26 C27 PEE sing 418 n n 
C27 H7 PEE sing 419 n n 
C27 H8 PEE sing 420 n n 
C27 H82 PEE sing 421 n n 
C26 H5 PEE sing 422 n n 
C26 H6 PEE sing 423 n n 
C25 H12 PEE sing 424 n n 
C25 H4 PEE sing 425 n n 
C24 H10 PEE sing 426 n n 
C24 H11 PEE sing 427 n n 
C23 H83 PEE sing 428 n n 
C23 H9 PEE sing 429 n n 
C22 H2 PEE sing 430 n n 
C22 H3 PEE sing 431 n n 
C21 H14 PEE sing 432 n n 
C21 H1 PEE sing 433 n n 
C20 H16 PEE sing 434 n n 
C20 H13 PEE sing 435 n n 
C19 H18 PEE sing 436 n n 
C18 H20 PEE sing 437 n n 
C17 H22 PEE sing 438 n n 
C17 H19 PEE sing 439 n n 
C16 H21 PEE sing 440 n n 
C16 H28 PEE sing 441 n n 
C15 H23 PEE sing 442 n n 
C15 H24 PEE sing 443 n n 
C14 H25 PEE sing 444 n n 
C14 H26 PEE sing 445 n n 
C13 H17 PEE sing 446 n n 
C13 H27 PEE sing 447 n n 
C12 H15 PEE sing 448 n n 
C12 H29 PEE sing 449 n n 
C11 H30 PEE sing 450 n n 
C11 H31 PEE sing 451 n n 
C2 H32 PEE sing 452 n n 
C1 H33 PEE sing 453 n n 
C1 H34 PEE sing 454 n n 
O2P H35 PEE sing 455 n n 
C4 H36 PEE sing 456 n n 
C4 H37 PEE sing 457 n n 
C5 H38 PEE sing 458 n n 
C5 H39 PEE sing 459 n n 
N H40 PEE sing 460 n n 
N H41 PEE sing 461 n n 
C3 H43 PEE sing 462 n n 
C3 H44 PEE sing 463 n n 
C31 H45 PEE sing 464 n n 
C31 H46 PEE sing 465 n n 
C32 H47 PEE sing 466 n n 
C32 H48 PEE sing 467 n n 
C33 H49 PEE sing 468 n n 
C33 H50 PEE sing 469 n n 
C34 H51 PEE sing 470 n n 
C34 H52 PEE sing 471 n n 
C35 H53 PEE sing 472 n n 
C35 H54 PEE sing 473 n n 
C36 H55 PEE sing 474 n n 
C36 H56 PEE sing 475 n n 
C37 H57 PEE sing 476 n n 
C37 H58 PEE sing 477 n n 
C38 H59 PEE sing 478 n n 
C39 H60 PEE sing 479 n n 
C40 H81 PEE sing 480 n n 
C40 H61 PEE sing 481 n n 
C41 H80 PEE sing 482 n n 
C41 H62 PEE sing 483 n n 
C42 H63 PEE sing 484 n n 
C42 H64 PEE sing 485 n n 
C43 H65 PEE sing 486 n n 
C43 H66 PEE sing 487 n n 
C44 H67 PEE sing 488 n n 
C44 H68 PEE sing 489 n n 
C45 H69 PEE sing 490 n n 
C45 H70 PEE sing 491 n n 
C46 H71 PEE sing 492 n n 
C46 H72 PEE sing 493 n n 
C47 H73 PEE sing 494 n n 
C47 H74 PEE sing 495 n n 
C47 H75 PEE sing 496 n n 
#
_atom_sites.entry_id                     2BCC 
_atom_sites.fract_transf_matrix[1][1]    0.005765 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005481 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004144 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
K 11 HEM C 1 381 1 HEM HEM . 
L 11 HEM C 1 382 2 HEM HEM . 
M 12 U10 C 1 383 5 U10 U10 . 
N 13 PEE C 1 384 7 PEE PEE . 
O 14 SIG C 1 385 9 SIG SIG . 
P 15 BOG D 1 242 8 BOG BOG . 
Q 11 HEM D 1 243 3 HEM HEM . 
R 16 FES E 1 197 4 FES FES . 
S 13 PEE E 1 198 6 PEE PEE . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C26 PEE . . . N 13 9.421 118.875 77.607 1 42.74 ? C26 PEE 384 C 1 
HETATM 2 C C25 PEE . . . N 13 8.778 118.042 76.455 1 45.63 ? C25 PEE 384 C 1 
HETATM 3 C C24 PEE . . . N 13 7.757 117.057 77.134 1 45.59 ? C24 PEE 384 C 1 
HETATM 4 C C23 PEE . . . N 13 7.646 115.508 76.726 1 48.82 ? C23 PEE 384 C 1 
HETATM 5 C C22 PEE . . . N 13 8.566 114.831 75.602 1 51.84 ? C22 PEE 384 C 1 
HETATM 6 C C21 PEE . . . N 13 8.345 115.143 74.308 1 50.35 ? C21 PEE 384 C 1 
HETATM 7 C C20 PEE . . . N 13 9.337 115.779 73.277 1 52.97 ? C20 PEE 384 C 1 
HETATM 8 C C19 PEE . . . N 13 8.679 115.657 71.848 1 53.27 ? C19 PEE 384 C 1 
HETATM 9 C C18 PEE . . . N 13 9.055 116.71 70.679 1 54.33 ? C18 PEE 384 C 1 
HETATM 10 C C17 PEE . . . N 13 10.189 116.319 69.631 1 57.43 ? C17 PEE 384 C 1 
HETATM 11 C C16 PEE . . . N 13 9.682 115.224 68.599 1 56.46 ? C16 PEE 384 C 1 
HETATM 12 C C15 PEE . . . N 13 10.679 114.693 67.514 1 45.78 ? C15 PEE 384 C 1 
HETATM 13 C C14 PEE . . . N 13 10.2 113.224 67.286 1 48.83 ? C14 PEE 384 C 1 
HETATM 14 C C13 PEE . . . N 13 11.227 112.128 67.666 1 48.46 ? C13 PEE 384 C 1 
HETATM 15 C C12 PEE . . . N 13 11.025 111.199 66.442 1 52.47 ? C12 PEE 384 C 1 
HETATM 16 C C11 PEE . . . N 13 12.143 110.086 66.315 1 56.91 ? C11 PEE 384 C 1 
HETATM 17 C C10 PEE . . . N 13 11.444 109.467 64.985 1 58.5 ? C10 PEE 384 C 1 
HETATM 18 O O4 PEE . . . N 13 11.356 109.073 66.191 1 64.89 ? O4 PEE 384 C 1 
HETATM 19 O O2 PEE . . . N 13 11.973 108.33 64.131 1 57.72 ? O2 PEE 384 C 1 
HETATM 20 C C2 PEE . . . N 13 11.182 107.917 63.041 1 53.59 ? C2 PEE 384 C 1 
HETATM 21 C C1 PEE . . . N 13 11.591 106.575 62.325 1 56.19 ? C1 PEE 384 C 1 
HETATM 22 O O3P PEE . . . N 13 10.942 105.332 62.72 1 58.49 ? O3P PEE 384 C 1 
HETATM 23 P P PEE . . . N 13 11.893 103.96 62.972 1 60.35 ? P PEE 384 C 1 
HETATM 24 O O2P PEE . . . N 13 10.911 102.909 63.372 1 62.3 ? O2P PEE 384 C 1 
HETATM 25 O O1P PEE . . . N 13 13.003 104.121 63.972 1 63.22 ? O1P PEE 384 C 1 
HETATM 26 O O4P PEE . . . N 13 12.675 103.457 61.602 1 70.66 ? O4P PEE 384 C 1 
HETATM 27 C C4 PEE . . . N 13 13.3 102.138 61.615 1 76.34 ? C4 PEE 384 C 1 
HETATM 28 C C5 PEE . . . N 13 14.833 102.392 61.412 1 82.76 ? C5 PEE 384 C 1 
HETATM 29 N N PEE . . . N 13 15.317 102.603 60.036 1 87.04 ? N PEE 384 C 1 
HETATM 30 C C3 PEE . . . N 13 9.896 108.416 62.343 1 55.44 ? C3 PEE 384 C 1 
HETATM 31 O O3 PEE . . . N 13 9.836 108.642 60.902 1 60.89 ? O3 PEE 384 C 1 
HETATM 32 C C30 PEE . . . N 13 9.76 109.948 60.634 1 58.58 ? C30 PEE 384 C 1 
HETATM 33 O O5 PEE . . . N 13 8.207 109.987 60.574 1 58.53 ? O5 PEE 384 C 1 
HETATM 34 C C31 PEE . . . N 13 10.362 111.185 60.339 1 57.86 ? C31 PEE 384 C 1 
HETATM 35 C C32 PEE . . . N 13 9.98 112.309 61.324 1 64.48 ? C32 PEE 384 C 1 
HETATM 36 C C33 PEE . . . N 13 10.344 113.782 61.119 1 71.21 ? C33 PEE 384 C 1 
HETATM 37 C C34 PEE . . . N 13 9.893 114.374 62.481 1 76.94 ? C34 PEE 384 C 1 
HETATM 38 C C35 PEE . . . N 13 10.144 115.91 62.6 1 77.28 ? C35 PEE 384 C 1 
HETATM 39 C C36 PEE . . . N 13 9.272 116.393 63.825 1 74.77 ? C36 PEE 384 C 1 
HETATM 40 C C37 PEE . . . N 13 9.147 117.956 63.981 1 71.94 ? C37 PEE 384 C 1 
HETATM 41 C C38 PEE . . . N 13 8.52 118.402 65.359 1 68.61 ? C38 PEE 384 C 1 
HETATM 42 C C39 PEE . . . N 13 8.521 119.956 65.743 1 71.09 ? C39 PEE 384 C 1 
HETATM 43 C C40 PEE . . . N 13 9.521 120.533 66.837 1 71.35 ? C40 PEE 384 C 1 
HETATM 44 C C41 PEE . . . N 13 8.667 121.447 67.794 1 72.89 ? C41 PEE 384 C 1 
HETATM 45 C C42 PEE . . . N 13 8.745 121.636 69.124 1 71.55 ? C42 PEE 384 C 1 
HETATM 46 C C43 PEE . . . N 13 7.374 121.742 69.903 1 67.84 ? C43 PEE 384 C 1 
HETATM 47 C C44 PEE . . . N 13 7.266 121.137 71.361 1 69.49 ? C44 PEE 384 C 1 
HETATM 48 C C45 PEE . . . N 13 7.834 121.914 72.595 1 68.41 ? C45 PEE 384 C 1 
HETATM 49 C C46 PEE . . . N 13 7.535 120.985 73.821 1 74.47 ? C46 PEE 384 C 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    37 
_model_server_stats.query_time_ms           293 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           49 
#